RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 HNRNPLLQ8WVV9 542 aaKnown RBP11.13□□□□□ -0.63
TUBGCP4-202ENST00000561691 BRI3BPQ8WY22 251 aa11.13□□□□□ -0.63
TUBGCP4-202ENST00000561691 KIFAP3Q92845 792 aa11.13□□□□□ -0.63
TUBGCP4-202ENST00000561691 HVCN1Q96D96 273 aa11.13□□□□□ -0.63
TUBGCP4-202ENST00000561691 GPR88Q9GZN0 384 aa11.13□□□□□ -0.63
TUBGCP4-202ENST00000561691 C17orf75Q9HAS0 396 aa11.13□□□□□ -0.63
TUBGCP4-202ENST00000561691 ZNF302Q9NR11 478 aa11.13□□□□□ -0.63
TUBGCP4-202ENST00000561691 HSPBP1Q9NZL4 362 aa11.13□□□□□ -0.63
TUBGCP4-202ENST00000561691 ARHGAP28Q9P2N2 729 aa11.13□□□□□ -0.63
TUBGCP4-202ENST00000561691 MYO1AQ9UBC5 1043 aa11.13□□□□□ -0.63
TUBGCP4-202ENST00000561691 SALL4Q9UJQ4 1053 aa11.13□□□□□ -0.63
TUBGCP4-202ENST00000561691 MAPK13O15264 365 aa11.12□□□□□ -0.63
TUBGCP4-202ENST00000561691 PJA2O43164 708 aa11.12□□□□□ -0.63
TUBGCP4-202ENST00000561691 KIF5CO60282 957 aa11.12□□□□□ -0.63
TUBGCP4-202ENST00000561691 DKC1O60832 514 aaKnown RBP eCLIP11.12□□□□□ -0.63
TUBGCP4-202ENST00000561691 LRRN2O75325 713 aa11.12□□□□□ -0.63
TUBGCP4-202ENST00000561691 PPFIA4O75335 1185 aa11.12□□□□□ -0.63
TUBGCP4-202ENST00000561691 TFRCP02786 760 aaKnown RBP11.12□□□□□ -0.63
TUBGCP4-202ENST00000561691 SERPING1P05155 500 aa11.12□□□□□ -0.63
TUBGCP4-202ENST00000561691 TGFB3P10600 412 aa11.12□□□□□ -0.63
TUBGCP4-202ENST00000561691 COPB2P35606 906 aa11.12□□□□□ -0.63
TUBGCP4-202ENST00000561691 ARL2P36404 184 aa11.12□□□□□ -0.63
TUBGCP4-202ENST00000561691 SNRPFP62306 86 aaKnown RBP11.12□□□□□ -0.63
TUBGCP4-202ENST00000561691 PPP3CAQ08209 521 aa11.12□□□□□ -0.63
TUBGCP4-202ENST00000561691 SFMBT2Q5VUG0 894 aa11.12□□□□□ -0.63
TUBGCP4-202ENST00000561691 IQCEQ6IPM2 695 aa11.12□□□□□ -0.63
TUBGCP4-202ENST00000561691 METTL7BQ6UX53 244 aa11.12□□□□□ -0.63
TUBGCP4-202ENST00000561691 GBP6Q6ZN66 633 aa11.12□□□□□ -0.63
TUBGCP4-202ENST00000561691 ASAP3Q8TDY4 903 aa11.12□□□□□ -0.63
TUBGCP4-202ENST00000561691 KAT2BQ92831 832 aa11.12□□□□□ -0.63
TUBGCP4-202ENST00000561691 SLC10A4Q96EP9 437 aa11.12□□□□□ -0.63
TUBGCP4-202ENST00000561691 CCDC42Q96M95 316 aa11.12□□□□□ -0.63
TUBGCP4-202ENST00000561691 FBXL18Q96ME1 805 aa11.12□□□□□ -0.63
TUBGCP4-202ENST00000561691 SYT11Q9BT88 431 aa11.12□□□□□ -0.63
TUBGCP4-202ENST00000561691 NUCKS1Q9H1E3 243 aaKnown RBP11.12□□□□□ -0.63
TUBGCP4-202ENST00000561691 PCIF1Q9H4Z3 704 aa11.12□□□□□ -0.63
TUBGCP4-202ENST00000561691 MROH8Q9H579 483 aa11.12□□□□□ -0.63
TUBGCP4-202ENST00000561691 PDE11AQ9HCR9 933 aa11.12□□□□□ -0.63
TUBGCP4-202ENST00000561691 SEPT9Q9UHD8 586 aaPredicted RBP11.12□□□□□ -0.63
TUBGCP4-202ENST00000561691 TCEAL9Q9UHQ7 104 aa11.12□□□□□ -0.63
TUBGCP4-202ENST00000561691 MYO6Q9UM54 1294 aa11.12□□□□□ -0.63
TUBGCP4-202ENST00000561691 PCDHA13Q9Y5I0 950 aa11.12□□□□□ -0.63
TUBGCP4-202ENST00000561691 SIP14410 1827 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 DENND3A2RUS2 1198 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 ZBTB42B2RXF5 422 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 BTBD19C9JJ37 291 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 PPP1R12AO14974 1030 aaPredicted RBP11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 EXOC3O60645 756 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 LGR5O75473 907 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 EDN1P05305 212 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 PRKCIP41743 596 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 GFPT1Q06210 699 aaPredicted RBP11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 EMC2Q15006 297 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 TCERG1LQ5VWI1 586 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 KCNV1Q6PIU1 500 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 CACNA2D4Q7Z3S7 1137 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 SYCP3Q8IZU3 236 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 SLC17A8Q8NDX2 589 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 MCPH1Q8NEM0 835 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 JAKMIP2Q96AA8 810 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 MMP19Q99542 508 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 TACO1Q9BSH4 297 aaKnown RBP11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 ATP6V0A4Q9HBG4 840 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 GCNT4Q9P109 453 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 GUCA1BQ9UMX6 200 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 USP20Q9Y2K6 914 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 SLC45A1Q9Y2W3 748 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 PMM2O15305 246 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 GGPS1O95749 300 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 GLRA2P23416 452 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 NEDD9Q14511 834 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 ZNF792Q3KQV3 632 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 MTERF2Q49AM1 385 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 EPC2Q52LR7 807 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 CELF3Q5SZQ8 465 aaKnown RBP11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 MAMDC4Q6UXC1 1216 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 EEPD1Q7L9B9 569 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 ZNF571Q7Z3V5 609 aaPredicted RBP11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 CBWD2Q8IUF1 395 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 XXYLT1Q8NBI6 393 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 GPR20Q99678 358 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 KATNBL1Q9H079 304 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 FAM107BQ9H098 131 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 INTS2Q9H0H0 1204 aaKnown RBP11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 POLR3FQ9H1D9 316 aaPredicted RBP11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 MORF4L1Q9UBU8 362 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 FRMD4BQ9Y2L6 1034 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 FAN1Q9Y2M0 1017 aa11.11□□□□□ -0.63
TUBGCP4-202ENST00000561691 A0A087X0T9 212 aa11.1□□□□□ -0.63
TUBGCP4-202ENST00000561691 ANKRD65E5RJM6 399 aa11.1□□□□□ -0.63
TUBGCP4-202ENST00000561691 PDHXO00330 501 aa11.1□□□□□ -0.63
TUBGCP4-202ENST00000561691 FAM228BP0C875 321 aa11.1□□□□□ -0.63
TUBGCP4-202ENST00000561691 CNGA1P29973 690 aa11.1□□□□□ -0.63
TUBGCP4-202ENST00000561691 DMP1Q13316 513 aaPredicted RBP11.1□□□□□ -0.63
TUBGCP4-202ENST00000561691 MKRN4PQ13434 485 aaPredicted RBP11.1□□□□□ -0.63
TUBGCP4-202ENST00000561691 C11orf91Q3C1V1 193 aa11.1□□□□□ -0.63
TUBGCP4-202ENST00000561691 HSDL1Q3SXM5 330 aa11.1□□□□□ -0.63
TUBGCP4-202ENST00000561691 BEND6Q5SZJ8 279 aaPredicted RBP11.1□□□□□ -0.63
TUBGCP4-202ENST00000561691 CCDC122Q5T0U0 273 aa11.1□□□□□ -0.63
TUBGCP4-202ENST00000561691 FBXO16Q8IX29 292 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms