RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 PIGRP01833 764 aa13.9□□□□□ -0.18
CMTM4-203ENST00000561680 CHRNA1P02708 482 aa13.9□□□□□ -0.18
CMTM4-203ENST00000561680 EDN1P05305 212 aa13.9□□□□□ -0.18
CMTM4-203ENST00000561680 PRKCBP05771 671 aa13.9□□□□□ -0.18
CMTM4-203ENST00000561680 CTSHP09668 335 aa13.9□□□□□ -0.18
CMTM4-203ENST00000561680 CKBP12277 381 aa13.9□□□□□ -0.18
CMTM4-203ENST00000561680 DARSP14868 501 aaKnown RBP13.9□□□□□ -0.18
CMTM4-203ENST00000561680 ZNF165P49910 485 aa13.9□□□□□ -0.18
CMTM4-203ENST00000561680 CRYBB1P53674 252 aaPredicted RBP13.9□□□□□ -0.18
CMTM4-203ENST00000561680 PMS1P54277 932 aaKnown RBP13.9□□□□□ -0.18
CMTM4-203ENST00000561680 STRN3Q13033 797 aa13.9□□□□□ -0.18
CMTM4-203ENST00000561680 MAPK6Q16659 721 aa13.9□□□□□ -0.18
CMTM4-203ENST00000561680 LRRC26Q2I0M4 334 aa13.9□□□□□ -0.18
CMTM4-203ENST00000561680 TTI2Q6NXR4 508 aa13.9□□□□□ -0.18
CMTM4-203ENST00000561680 PPP4R3CPQ6ZMV5 832 aa13.9□□□□□ -0.18
CMTM4-203ENST00000561680 GAS2L3Q86XJ1 694 aa13.9□□□□□ -0.18
CMTM4-203ENST00000561680 FAM200AQ8TCP9 573 aa13.9□□□□□ -0.18
CMTM4-203ENST00000561680 PRIMPOLQ96LW4 560 aa13.9□□□□□ -0.18
CMTM4-203ENST00000561680 INO80BQ9C086 356 aaPredicted RBP13.9□□□□□ -0.18
CMTM4-203ENST00000561680 GBP3Q9H0R5 595 aa13.9□□□□□ -0.18
CMTM4-203ENST00000561680 TYW1Q9NV66 732 aaKnown RBP13.9□□□□□ -0.18
CMTM4-203ENST00000561680 PRMT7Q9NVM4 692 aaPredicted RBP13.9□□□□□ -0.18
CMTM4-203ENST00000561680 EXOC7Q9UPT5 735 aa13.9□□□□□ -0.18
CMTM4-203ENST00000561680 PTPRSQ13332 1948 aa13.9□□□□□ -0.18
CMTM4-203ENST00000561680 CNTNAP2Q9UHC6 1331 aa13.9□□□□□ -0.19
CMTM4-203ENST00000561680 MKI67P46013 3256 aaKnown RBP13.89□□□□□ -0.19
CMTM4-203ENST00000561680 PITPNM1O00562 1244 aa13.89□□□□□ -0.19
CMTM4-203ENST00000561680 PDXKO00764 312 aa13.89□□□□□ -0.19
CMTM4-203ENST00000561680 TGFB1I1O43294 461 aa13.89□□□□□ -0.19
CMTM4-203ENST00000561680 IQCF3P0C7M6 154 aa13.89□□□□□ -0.19
CMTM4-203ENST00000561680 EIF4BP23588 611 aaKnown RBP13.89□□□□□ -0.19
CMTM4-203ENST00000561680 STX17P56962 302 aa13.89□□□□□ -0.19
CMTM4-203ENST00000561680 TLE2Q04725 743 aa13.89□□□□□ -0.19
CMTM4-203ENST00000561680 LRRC63Q05C16 580 aa13.89□□□□□ -0.19
CMTM4-203ENST00000561680 FAAP100Q0VG06 881 aa13.89□□□□□ -0.19
CMTM4-203ENST00000561680 BFSP2Q13515 415 aa13.89□□□□□ -0.19
CMTM4-203ENST00000561680 IQCB1Q15051 598 aa13.89□□□□□ -0.19
CMTM4-203ENST00000561680 PCBP1Q15365 356 aaKnown RBP eCLIP13.89□□□□□ -0.19
CMTM4-203ENST00000561680 NFIL3Q16649 462 aa13.89□□□□□ -0.19
CMTM4-203ENST00000561680 AMHR2Q16671 573 aa13.89□□□□□ -0.19
CMTM4-203ENST00000561680 ZNF618Q5T7W0 954 aa13.89□□□□□ -0.19
CMTM4-203ENST00000561680 SLC39A4Q6P5W5 647 aa13.89□□□□□ -0.19
CMTM4-203ENST00000561680 TRAF7Q6Q0C0 670 aa13.89□□□□□ -0.19
CMTM4-203ENST00000561680 SYCP3Q8IZU3 236 aa13.89□□□□□ -0.19
CMTM4-203ENST00000561680 AOPEPQ8N6M6 819 aa13.89□□□□□ -0.19
CMTM4-203ENST00000561680 TMEM40Q8WWA1 233 aa13.89□□□□□ -0.19
CMTM4-203ENST00000561680 ABHD8Q96I13 439 aa13.89□□□□□ -0.19
CMTM4-203ENST00000561680 MRPL4Q9BYD3 311 aaKnown RBP13.89□□□□□ -0.19
CMTM4-203ENST00000561680 IKZF4Q9H2S9 585 aa13.89□□□□□ -0.19
CMTM4-203ENST00000561680 CBX8Q9HC52 389 aa13.89□□□□□ -0.19
CMTM4-203ENST00000561680 CGNQ9P2M7 1197 aaKnown RBP13.89□□□□□ -0.19
CMTM4-203ENST00000561680 TRAF3IP3Q9Y228 551 aa13.89□□□□□ -0.19
CMTM4-203ENST00000561680 GINS2Q9Y248 185 aa13.89□□□□□ -0.19
CMTM4-203ENST00000561680 ATP11BQ9Y2G3 1177 aa13.89□□□□□ -0.19
CMTM4-203ENST00000561680 TTC3P53804 2025 aa13.88□□□□□ -0.19
CMTM4-203ENST00000561680 ACKR2O00590 384 aa13.88□□□□□ -0.19
CMTM4-203ENST00000561680 IKBKBO14920 756 aa13.88□□□□□ -0.19
CMTM4-203ENST00000561680 HNRNPDLO14979 420 aaKnown RBP13.88□□□□□ -0.19
CMTM4-203ENST00000561680 CSDE1O75534 798 aaKnown RBP13.88□□□□□ -0.19
CMTM4-203ENST00000561680 SFPQP23246 707 aaKnown RBP eCLIP13.88□□□□□ -0.19
CMTM4-203ENST00000561680 SNRPFP62306 86 aaKnown RBP13.88□□□□□ -0.19
CMTM4-203ENST00000561680 MYL5Q02045 173 aa13.88□□□□□ -0.19
CMTM4-203ENST00000561680 EDRF1Q3B7T1 1238 aa13.88□□□□□ -0.19
CMTM4-203ENST00000561680 FBXO47Q5MNV8 452 aa13.88□□□□□ -0.19
CMTM4-203ENST00000561680 ANKRD40Q6AI12 368 aa13.88□□□□□ -0.19
CMTM4-203ENST00000561680 ZPBP2Q6X784 338 aa13.88□□□□□ -0.19
CMTM4-203ENST00000561680 HS2ST1Q7LGA3 356 aa13.88□□□□□ -0.19
CMTM4-203ENST00000561680 DHX40Q8IX18 779 aaKnown RBP13.88□□□□□ -0.19
CMTM4-203ENST00000561680 C12orf56Q8IXR9 622 aa13.88□□□□□ -0.19
CMTM4-203ENST00000561680 ZC3H3Q8IXZ2 948 aaKnown RBP13.88□□□□□ -0.19
CMTM4-203ENST00000561680 GOLGA5Q8TBA6 731 aa13.88□□□□□ -0.19
CMTM4-203ENST00000561680 ENOX1Q8TC92 643 aaKnown RBP13.88□□□□□ -0.19
CMTM4-203ENST00000561680 BICD1Q96G01 975 aa13.88□□□□□ -0.19
CMTM4-203ENST00000561680 TSG101Q99816 390 aa13.88□□□□□ -0.19
CMTM4-203ENST00000561680 DUSP9Q99956 384 aaKnown RBP13.88□□□□□ -0.19
CMTM4-203ENST00000561680 NOC4LQ9BVI4 516 aaKnown RBP13.88□□□□□ -0.19
CMTM4-203ENST00000561680 AGPAT3Q9NRZ7 376 aa13.88□□□□□ -0.19
CMTM4-203ENST00000561680 TBX21Q9UL17 535 aa13.88□□□□□ -0.19
CMTM4-203ENST00000561680 FNDC1Q4ZHG4 1894 aaPredicted RBP13.87□□□□□ -0.19
CMTM4-203ENST00000561680 TTLL13PA6NNM8 815 aa13.87□□□□□ -0.19
CMTM4-203ENST00000561680 TISP43B9A030 160 aa13.87□□□□□ -0.19
CMTM4-203ENST00000561680 B4GALT5O43286 388 aa13.87□□□□□ -0.19
CMTM4-203ENST00000561680 CALUO43852 315 aaPredicted RBP13.87□□□□□ -0.19
CMTM4-203ENST00000561680 TSPAN1O60635 241 aa13.87□□□□□ -0.19
CMTM4-203ENST00000561680 ERLIN2O94905 339 aa13.87□□□□□ -0.19
CMTM4-203ENST00000561680 CLTBP09497 229 aa13.87□□□□□ -0.19
CMTM4-203ENST00000561680 SELPP16109 830 aa13.87□□□□□ -0.19
CMTM4-203ENST00000561680 LIG4P49917 911 aa13.87□□□□□ -0.19
CMTM4-203ENST00000561680 PRPF4BQ13523 1007 aaKnown RBP13.87□□□□□ -0.19
CMTM4-203ENST00000561680 NCAPHQ15003 741 aa13.87□□□□□ -0.19
CMTM4-203ENST00000561680 FAM228AQ86W67 206 aa13.87□□□□□ -0.19
CMTM4-203ENST00000561680 TMEM174Q8WUU8 243 aa13.87□□□□□ -0.19
CMTM4-203ENST00000561680 ACO2Q99798 780 aaKnown RBP13.87□□□□□ -0.19
CMTM4-203ENST00000561680 TARS2Q9BW92 718 aaKnown RBP13.87□□□□□ -0.19
CMTM4-203ENST00000561680 NOC2LQ9Y3T9 749 aaKnown RBP13.87□□□□□ -0.19
CMTM4-203ENST00000561680 STYXL1Q9Y6J8 313 aa13.87□□□□□ -0.19
CMTM4-203ENST00000561680 SQORQ9Y6N5 450 aa13.87□□□□□ -0.19
CMTM4-203ENST00000561680 ANKRD63C9JTQ0 380 aa13.86□□□□□ -0.19
CMTM4-203ENST00000561680 ABLIM1O14639 778 aa13.86□□□□□ -0.19
CMTM4-203ENST00000561680 NR3C1P04150 777 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms