RNA–Protein interactions for RNA: ENST00000561557.1

LINC00566-201, long intergenic non-protein coding RNA 566, humanhuman

TSL 1 (best) BASIC

Gene LINC00566, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00566-201ENST00000561557 PBX4Q9BYU1 374 aa10.61□□□□□ -0.71
LINC00566-201ENST00000561557 LRRC27Q9C0I9 530 aa10.61□□□□□ -0.71
LINC00566-201ENST00000561557 TMX1Q9H3N1 280 aa10.61□□□□□ -0.71
LINC00566-201ENST00000561557 CUEDC2Q9H467 287 aa10.61□□□□□ -0.71
LINC00566-201ENST00000561557 ELAC1Q9H777 363 aaKnown RBP10.61□□□□□ -0.71
LINC00566-201ENST00000561557 BLOC1S4Q9NUP1 217 aa10.61□□□□□ -0.71
LINC00566-201ENST00000561557 FAM13BQ9NYF5 915 aa10.61□□□□□ -0.71
LINC00566-201ENST00000561557 ODF2LQ9ULJ1 636 aa10.61□□□□□ -0.71
LINC00566-201ENST00000561557 PCDHA7Q9UN72 937 aa10.61□□□□□ -0.71
LINC00566-201ENST00000561557 TTC3P53804 2025 aa10.61□□□□□ -0.71
LINC00566-201ENST00000561557 C9IYK1 514 aa10.6□□□□□ -0.71
LINC00566-201ENST00000561557 H0YCG3 227 aa10.6□□□□□ -0.71
LINC00566-201ENST00000561557 SOX1O00570 391 aaPredicted RBP10.6□□□□□ -0.71
LINC00566-201ENST00000561557 TLL1O43897 1013 aa10.6□□□□□ -0.71
LINC00566-201ENST00000561557 HIP1RO75146 1068 aa10.6□□□□□ -0.71
LINC00566-201ENST00000561557 SSBP05455 408 aaKnown RBP eCLIP10.6□□□□□ -0.71
LINC00566-201ENST00000561557 DNAJB2P25686 324 aa10.6□□□□□ -0.71
LINC00566-201ENST00000561557 ME1P48163 572 aa10.6□□□□□ -0.71
LINC00566-201ENST00000561557 EFNA5P52803 228 aa10.6□□□□□ -0.71
LINC00566-201ENST00000561557 HTRA4P83105 476 aaPredicted RBP10.6□□□□□ -0.71
LINC00566-201ENST00000561557 FAM187BQ17R55 369 aa10.6□□□□□ -0.71
LINC00566-201ENST00000561557 FOXD4L6Q3SYB3 417 aaPredicted RBP10.6□□□□□ -0.71
LINC00566-201ENST00000561557 CDCA2Q69YH5 1023 aaPredicted RBP10.6□□□□□ -0.71
LINC00566-201ENST00000561557 ADALQ6DHV7 355 aa10.6□□□□□ -0.71
LINC00566-201ENST00000561557 FOXD4L3Q6VB84 417 aaPredicted RBP10.6□□□□□ -0.71
LINC00566-201ENST00000561557 USP49Q70CQ1 688 aa10.6□□□□□ -0.71
LINC00566-201ENST00000561557 SV2BQ7L1I2 683 aa10.6□□□□□ -0.71
LINC00566-201ENST00000561557 MAEAQ7L5Y9 396 aa10.6□□□□□ -0.71
LINC00566-201ENST00000561557 LEO1Q8WVC0 666 aaPredicted RBP10.6□□□□□ -0.71
LINC00566-201ENST00000561557 TIFAQ96CG3 184 aa10.6□□□□□ -0.71
LINC00566-201ENST00000561557 CCDC51Q96ER9 411 aa10.6□□□□□ -0.71
LINC00566-201ENST00000561557 ZNF668Q96K58 619 aaPredicted RBP10.6□□□□□ -0.71
LINC00566-201ENST00000561557 SPATA32Q96LK8 384 aa10.6□□□□□ -0.71
LINC00566-201ENST00000561557 NTPCRQ9BSD7 190 aaKnown RBP10.6□□□□□ -0.71
LINC00566-201ENST00000561557 GPRC5CQ9NQ84 441 aa10.6□□□□□ -0.71
LINC00566-201ENST00000561557 PRMT7Q9NVM4 692 aaPredicted RBP10.6□□□□□ -0.71
LINC00566-201ENST00000561557 RBM19Q9Y4C8 960 aaKnown RBP10.6□□□□□ -0.71
LINC00566-201ENST00000561557 A0A0U1RQF3 1178 aa10.59□□□□□ -0.71
LINC00566-201ENST00000561557 LRRIQ4A6NIV6 560 aa10.59□□□□□ -0.71
LINC00566-201ENST00000561557 GRXCR1A8MXD5 290 aa10.59□□□□□ -0.71
LINC00566-201ENST00000561557 PPP1R3GB7ZBB8 358 aa10.59□□□□□ -0.71
LINC00566-201ENST00000561557 INO80B-WBP1J3KQ70 363 aa10.59□□□□□ -0.71
LINC00566-201ENST00000561557 HOXA2O43364 376 aa10.59□□□□□ -0.71
LINC00566-201ENST00000561557 MGEA5O60502 916 aa10.59□□□□□ -0.71
LINC00566-201ENST00000561557 ZNF623O75123 536 aa10.59□□□□□ -0.71
LINC00566-201ENST00000561557 ERLIN2O94905 339 aa10.59□□□□□ -0.71
LINC00566-201ENST00000561557 EOMESO95936 686 aa10.59□□□□□ -0.71
LINC00566-201ENST00000561557 NCLP19338 710 aaKnown RBP10.59□□□□□ -0.71
LINC00566-201ENST00000561557 CMA1P23946 247 aa10.59□□□□□ -0.71
LINC00566-201ENST00000561557 ABCD1P33897 745 aa10.59□□□□□ -0.71
LINC00566-201ENST00000561557 STAT6P42226 847 aa10.59□□□□□ -0.71
LINC00566-201ENST00000561557 RAB27AP51159 221 aa10.59□□□□□ -0.71
LINC00566-201ENST00000561557 SMTNP53814 917 aa10.59□□□□□ -0.71
LINC00566-201ENST00000561557 MCM6Q14566 821 aa10.59□□□□□ -0.71
LINC00566-201ENST00000561557 ARSHQ5FYA8 562 aa10.59□□□□□ -0.71
LINC00566-201ENST00000561557 ZNF697Q5TEC3 545 aa10.59□□□□□ -0.71
LINC00566-201ENST00000561557 CRIPAKQ8N1N5 446 aa10.59□□□□□ -0.71
LINC00566-201ENST00000561557 IQUBQ8NA54 791 aa10.59□□□□□ -0.71
LINC00566-201ENST00000561557 CNNM3Q8NE01 707 aa10.59□□□□□ -0.71
LINC00566-201ENST00000561557 DEPTORQ8TB45 409 aa10.59□□□□□ -0.71
LINC00566-201ENST00000561557 SPIRE2Q8WWL2 714 aa10.59□□□□□ -0.71
LINC00566-201ENST00000561557 LINC01599Q8WXQ3 324 aa10.59□□□□□ -0.71
LINC00566-201ENST00000561557 KCNN1Q92952 543 aa10.59□□□□□ -0.71
LINC00566-201ENST00000561557 LRCH3Q96II8 777 aa10.59□□□□□ -0.71
LINC00566-201ENST00000561557 RUSC1Q9BVN2 902 aa10.59□□□□□ -0.71
LINC00566-201ENST00000561557 FZD8Q9H461 694 aa10.59□□□□□ -0.71
LINC00566-201ENST00000561557 TMEM134Q9H6X4 195 aa10.59□□□□□ -0.71
LINC00566-201ENST00000561557 SLC28A3Q9HAS3 691 aa10.59□□□□□ -0.71
LINC00566-201ENST00000561557 MAGEF1Q9HAY2 307 aa10.59□□□□□ -0.71
LINC00566-201ENST00000561557 AGPAT5Q9NUQ2 364 aa10.59□□□□□ -0.71
LINC00566-201ENST00000561557 TMEM161AQ9NX61 479 aa10.59□□□□□ -0.71
LINC00566-201ENST00000561557 LARSQ9P2J5 1176 aaKnown RBP10.59□□□□□ -0.71
LINC00566-201ENST00000561557 LRFN2Q9ULH4 789 aa10.59□□□□□ -0.71
LINC00566-201ENST00000561557 PCDHB7Q9Y5E2 793 aa10.59□□□□□ -0.71
LINC00566-201ENST00000561557 ACKR2O00590 384 aa10.58□□□□□ -0.72
LINC00566-201ENST00000561557 DPYSL4O14531 572 aa10.58□□□□□ -0.72
LINC00566-201ENST00000561557 CSDE1O75534 798 aaKnown RBP10.58□□□□□ -0.72
LINC00566-201ENST00000561557 PLS3P13797 630 aa10.58□□□□□ -0.72
LINC00566-201ENST00000561557 FGFR4P22455 802 aa10.58□□□□□ -0.72
LINC00566-201ENST00000561557 NPTX2P47972 431 aa10.58□□□□□ -0.72
LINC00566-201ENST00000561557 RABGGTBP53611 331 aa10.58□□□□□ -0.72
LINC00566-201ENST00000561557 AMPD3Q01432 767 aa10.58□□□□□ -0.72
LINC00566-201ENST00000561557 MBTD1Q05BQ5 628 aa10.58□□□□□ -0.72
LINC00566-201ENST00000561557 MAPK7Q13164 816 aa10.58□□□□□ -0.72
LINC00566-201ENST00000561557 DMP1Q13316 513 aaPredicted RBP10.58□□□□□ -0.72
LINC00566-201ENST00000561557 MAPK6Q16659 721 aa10.58□□□□□ -0.72
LINC00566-201ENST00000561557 NAALADL2Q58DX5 795 aa10.58□□□□□ -0.72
LINC00566-201ENST00000561557 RESP18Q5W5W9 173 aa10.58□□□□□ -0.72
LINC00566-201ENST00000561557 TWF2Q6IBS0 349 aaKnown RBP10.58□□□□□ -0.72
LINC00566-201ENST00000561557 NOTUMQ6P988 496 aa10.58□□□□□ -0.72
LINC00566-201ENST00000561557 SHC4Q6S5L8 630 aa10.58□□□□□ -0.72
LINC00566-201ENST00000561557 GPBP1Q86WP2 473 aa10.58□□□□□ -0.72
LINC00566-201ENST00000561557 ECHDC2Q86YB7 292 aa10.58□□□□□ -0.72
LINC00566-201ENST00000561557 DAW1Q8N136 415 aa10.58□□□□□ -0.72
LINC00566-201ENST00000561557 SLC17A8Q8NDX2 589 aa10.58□□□□□ -0.72
LINC00566-201ENST00000561557 BSNDQ8WZ55 320 aa10.58□□□□□ -0.72
LINC00566-201ENST00000561557 ZNF689Q96CS4 500 aaPredicted RBP10.58□□□□□ -0.72
LINC00566-201ENST00000561557 PGBD4Q96DM1 585 aa10.58□□□□□ -0.72
LINC00566-201ENST00000561557 MINDY3Q9H8M7 445 aa10.58□□□□□ -0.72
LINC00566-201ENST00000561557 KMT5AQ9NQR1 393 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms