RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 ZNF295-AS1Q8N0V1 137 aa6.17□□□□□ -1.42
HERC1-213ENST00000561359 TMEM151AQ8N4L1 468 aa6.17□□□□□ -1.42
HERC1-213ENST00000561359 MRPL43Q8N983 215 aaKnown RBP6.17□□□□□ -1.42
HERC1-213ENST00000561359 TSEN2Q8NCE0 465 aaKnown RBP6.17□□□□□ -1.42
HERC1-213ENST00000561359 ZBTB44Q8NCP5 570 aa6.17□□□□□ -1.42
HERC1-213ENST00000561359 PJA1Q8NG27 643 aa6.17□□□□□ -1.42
HERC1-213ENST00000561359 GPR152Q8TDT2 470 aa6.17□□□□□ -1.42
HERC1-213ENST00000561359 ZDHHC1Q8WTX9 485 aa6.17□□□□□ -1.42
HERC1-213ENST00000561359 DNAJB3Q8WWF6 145 aa6.17□□□□□ -1.42
HERC1-213ENST00000561359 TBC1D5Q92609 795 aa6.17□□□□□ -1.42
HERC1-213ENST00000561359 USP26Q9BXU7 913 aa6.17□□□□□ -1.42
HERC1-213ENST00000561359 COL20A1Q9P218 1284 aa6.17□□□□□ -1.42
HERC1-213ENST00000561359 GDF2Q9UK05 429 aaPredicted RBP6.17□□□□□ -1.42
HERC1-213ENST00000561359 ZNF215Q9UL58 517 aaPredicted RBP6.17□□□□□ -1.42
HERC1-213ENST00000561359 CCDC171Q6TFL3 1326 aa6.17□□□□□ -1.42
HERC1-213ENST00000561359 WDR19Q8NEZ3 1342 aa6.17□□□□□ -1.42
HERC1-213ENST00000561359 SMG1Q96Q15 3661 aaKnown RBP6.17□□□□□ -1.42
HERC1-213ENST00000561359 FANCMQ8IYD8 2048 aa6.16□□□□□ -1.42
HERC1-213ENST00000561359 SRRM3A6NNA2 597 aaPredicted RBP6.16□□□□□ -1.42
HERC1-213ENST00000561359 M0QZ92 97 aa6.16□□□□□ -1.42
HERC1-213ENST00000561359 IPO8O15397 1037 aaKnown RBP6.16□□□□□ -1.42
HERC1-213ENST00000561359 OIP5O43482 229 aa6.16□□□□□ -1.42
HERC1-213ENST00000561359 CXCL14O95715 111 aa6.16□□□□□ -1.42
HERC1-213ENST00000561359 MAPTP10636 758 aaKnown RBP6.16□□□□□ -1.42
HERC1-213ENST00000561359 EPCAMP16422 314 aa6.16□□□□□ -1.42
HERC1-213ENST00000561359 UBA1P22314 1058 aaKnown RBP6.16□□□□□ -1.42
HERC1-213ENST00000561359 AMPD1P23109 780 aa6.16□□□□□ -1.42
HERC1-213ENST00000561359 GBP2P32456 591 aaPredicted RBP6.16□□□□□ -1.42
HERC1-213ENST00000561359 PPM1AP35813 382 aa6.16□□□□□ -1.42
HERC1-213ENST00000561359 PBX3P40426 434 aa6.16□□□□□ -1.42
HERC1-213ENST00000561359 SARSP49591 514 aaKnown RBP6.16□□□□□ -1.42
HERC1-213ENST00000561359 EPHA4P54764 986 aa6.16□□□□□ -1.42
HERC1-213ENST00000561359 ADAM17P78536 824 aa6.16□□□□□ -1.42
HERC1-213ENST00000561359 SP2Q02086 613 aa6.16□□□□□ -1.42
HERC1-213ENST00000561359 SLFN5Q08AF3 891 aa6.16□□□□□ -1.42
HERC1-213ENST00000561359 PAK2Q13177 524 aa6.16□□□□□ -1.42
HERC1-213ENST00000561359 PTPN14Q15678 1187 aa6.16□□□□□ -1.42
HERC1-213ENST00000561359 UTP14CQ5TAP6 766 aaKnown RBP6.16□□□□□ -1.42
HERC1-213ENST00000561359 KCNT2Q6UVM3 1135 aa6.16□□□□□ -1.42
HERC1-213ENST00000561359 PRR23CQ6ZRP0 262 aa6.16□□□□□ -1.42
HERC1-213ENST00000561359 MCF2L2Q86YR7 1114 aa6.16□□□□□ -1.42
HERC1-213ENST00000561359 CLASRPQ8N2M8 674 aaKnown RBP6.16□□□□□ -1.42
HERC1-213ENST00000561359 SLC44A3Q8N4M1 653 aa6.16□□□□□ -1.42
HERC1-213ENST00000561359 GOLGA6L1Q8N7Z2 621 aa6.16□□□□□ -1.42
HERC1-213ENST00000561359 GALNT6Q8NCL4 622 aa6.16□□□□□ -1.42
HERC1-213ENST00000561359 FEZF2Q8TBJ5 459 aa6.16□□□□□ -1.42
HERC1-213ENST00000561359 RHPN1Q8TCX5 695 aa6.16□□□□□ -1.42
HERC1-213ENST00000561359 GLG1Q92896 1179 aa6.16□□□□□ -1.42
HERC1-213ENST00000561359 SHDQ96IW2 340 aa6.16□□□□□ -1.42
HERC1-213ENST00000561359 FAM49AQ9H0Q0 323 aaPredicted RBP6.16□□□□□ -1.42
HERC1-213ENST00000561359 TSPAN10Q9H1Z9 355 aaPredicted RBP6.16□□□□□ -1.42
HERC1-213ENST00000561359 EPB41L4AQ9HCS5 686 aaPredicted RBP6.16□□□□□ -1.42
HERC1-213ENST00000561359 PXMP2Q9NR77 195 aa6.16□□□□□ -1.42
HERC1-213ENST00000561359 IL17RBQ9NRM6 502 aa6.16□□□□□ -1.42
HERC1-213ENST00000561359 SEMA4GQ9NTN9 838 aa6.16□□□□□ -1.42
HERC1-213ENST00000561359 NDFIP2Q9NV92 336 aa6.16□□□□□ -1.42
HERC1-213ENST00000561359 PADI3Q9ULW8 664 aa6.16□□□□□ -1.42
HERC1-213ENST00000561359 NRCAMQ92823 1304 aa6.16□□□□□ -1.42
HERC1-213ENST00000561359 PLXNA4Q9HCM2 1894 aa6.15□□□□□ -1.42
HERC1-213ENST00000561359 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.15□□□□□ -1.42
HERC1-213ENST00000561359 DENND3A2RUS2 1198 aa6.15□□□□□ -1.42
HERC1-213ENST00000561359 M0R2N6 131 aa6.15□□□□□ -1.42
HERC1-213ENST00000561359 TAF4O00268 1085 aa6.15□□□□□ -1.42
HERC1-213ENST00000561359 RANBP6O60518 1105 aaKnown RBP6.15□□□□□ -1.42
HERC1-213ENST00000561359 LILRB5O75023 590 aa6.15□□□□□ -1.42
HERC1-213ENST00000561359 LRP3O75074 770 aa6.15□□□□□ -1.42
HERC1-213ENST00000561359 RETP07949 1114 aa6.15□□□□□ -1.42
HERC1-213ENST00000561359 CT47B1P0C2W7 299 aaPredicted RBP6.15□□□□□ -1.42
HERC1-213ENST00000561359 TGFB3P10600 412 aa6.15□□□□□ -1.42
HERC1-213ENST00000561359 HSPD1P10809 573 aaKnown RBP6.15□□□□□ -1.42
HERC1-213ENST00000561359 TRIM27P14373 513 aa6.15□□□□□ -1.42
HERC1-213ENST00000561359 CD33P20138 364 aa6.15□□□□□ -1.42
HERC1-213ENST00000561359 RBM25P49756 843 aaKnown RBP6.15□□□□□ -1.42
HERC1-213ENST00000561359 SEC13P55735 322 aa6.15□□□□□ -1.42
HERC1-213ENST00000561359 MRPS6P82932 125 aaKnown RBP6.15□□□□□ -1.42
HERC1-213ENST00000561359 PPFIA1Q13136 1202 aa6.15□□□□□ -1.42
HERC1-213ENST00000561359 UBXN2BQ14CS0 331 aa6.15□□□□□ -1.42
HERC1-213ENST00000561359 LETM2Q2VYF4 491 aa6.15□□□□□ -1.42
HERC1-213ENST00000561359 IER5Q5VY09 327 aa6.15□□□□□ -1.42
HERC1-213ENST00000561359 LAIR1Q6GTX8 287 aa6.15□□□□□ -1.42
HERC1-213ENST00000561359 TSSK4Q6SA08 328 aa6.15□□□□□ -1.42
HERC1-213ENST00000561359 LRRC69Q6ZNQ3 347 aa6.15□□□□□ -1.42
HERC1-213ENST00000561359 PRR23BQ6ZRT6 265 aa6.15□□□□□ -1.42
HERC1-213ENST00000561359 GPR149Q86SP6 731 aa6.15□□□□□ -1.42
HERC1-213ENST00000561359 BEND7Q8N7W2 519 aaPredicted RBP6.15□□□□□ -1.42
HERC1-213ENST00000561359 FRAT1Q92837 279 aaPredicted RBP6.15□□□□□ -1.42
HERC1-213ENST00000561359 ZNF558Q96NG5 402 aa6.15□□□□□ -1.42
HERC1-213ENST00000561359 NACAP1Q9BZK3 213 aa6.15□□□□□ -1.42
HERC1-213ENST00000561359 CWH43Q9H720 699 aa6.15□□□□□ -1.42
HERC1-213ENST00000561359 VRTNQ9H8Y1 702 aa6.15□□□□□ -1.42
HERC1-213ENST00000561359 SFXN1Q9H9B4 322 aa6.15□□□□□ -1.42
HERC1-213ENST00000561359 SPG21Q9NZD8 308 aa6.15□□□□□ -1.42
HERC1-213ENST00000561359 TUBE1Q9UJT0 475 aa6.15□□□□□ -1.42
HERC1-213ENST00000561359 TNNQ9UQP3 1299 aa6.15□□□□□ -1.42
HERC1-213ENST00000561359 DNMT3AQ9Y6K1 912 aaPredicted RBP6.15□□□□□ -1.42
HERC1-213ENST00000561359 MYH7BA7E2Y1 1941 aa6.15□□□□□ -1.43
HERC1-213ENST00000561359 KIAA1671Q9BY89 1806 aa6.14□□□□□ -1.43
HERC1-213ENST00000561359 KANSL1LA0AUZ9 987 aa6.14□□□□□ -1.43
HERC1-213ENST00000561359 TMEM8BA6NDV4 472 aa6.14□□□□□ -1.43
HERC1-213ENST00000561359 FAM170BA6NMN3 283 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms