RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 C2orf40Q9H1Z8 148 aa12.36□□□□□ -0.43
SNX1-212ENST00000560861 NDST4Q9H3R1 872 aa12.36□□□□□ -0.43
SNX1-212ENST00000560861 FZD8Q9H461 694 aa12.36□□□□□ -0.43
SNX1-212ENST00000560861 IFT122Q9HBG6 1241 aa12.36□□□□□ -0.43
SNX1-212ENST00000560861 METTL14Q9HCE5 456 aaKnown RBP12.36□□□□□ -0.43
SNX1-212ENST00000560861 XPNPEP3Q9NQH7 507 aa12.36□□□□□ -0.43
SNX1-212ENST00000560861 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.36□□□□□ -0.43
SNX1-212ENST00000560861 HSPBP1Q9NZL4 362 aa12.36□□□□□ -0.43
SNX1-212ENST00000560861 ARMCX3Q9UH62 379 aaPredicted RBP12.36□□□□□ -0.43
SNX1-212ENST00000560861 DDX20Q9UHI6 824 aaKnown RBP12.36□□□□□ -0.43
SNX1-212ENST00000560861 SIK3Q9Y2K2 1263 aa12.36□□□□□ -0.43
SNX1-212ENST00000560861 PTCH2Q9Y6C5 1203 aa12.36□□□□□ -0.43
SNX1-212ENST00000560861 SMIM35A0A1B0GVV1 85 aa12.35□□□□□ -0.43
SNX1-212ENST00000560861 TTLL13PA6NNM8 815 aa12.35□□□□□ -0.43
SNX1-212ENST00000560861 GOLGA6L6A8MZA4 724 aa12.35□□□□□ -0.43
SNX1-212ENST00000560861 K7ERI5 159 aa12.35□□□□□ -0.43
SNX1-212ENST00000560861 INHAP05111 366 aa12.35□□□□□ -0.43
SNX1-212ENST00000560861 ADRB2P07550 413 aa12.35□□□□□ -0.43
SNX1-212ENST00000560861 ATXN8OSP0DMR3 200 aa12.35□□□□□ -0.43
SNX1-212ENST00000560861 EPB41P11171 864 aaKnown RBP12.35□□□□□ -0.43
SNX1-212ENST00000560861 PRKCSHP14314 528 aaPredicted RBP12.35□□□□□ -0.43
SNX1-212ENST00000560861 CYP2J2P51589 502 aa12.35□□□□□ -0.43
SNX1-212ENST00000560861 UBXN1Q04323 297 aa12.35□□□□□ -0.43
SNX1-212ENST00000560861 MBTD1Q05BQ5 628 aa12.35□□□□□ -0.43
SNX1-212ENST00000560861 PPP2R3AQ06190 1150 aa12.35□□□□□ -0.43
SNX1-212ENST00000560861 TFDP1Q14186 410 aa12.35□□□□□ -0.43
SNX1-212ENST00000560861 AMHR2Q16671 573 aa12.35□□□□□ -0.43
SNX1-212ENST00000560861 FAM187BQ17R55 369 aa12.35□□□□□ -0.43
SNX1-212ENST00000560861 GNASQ5JWF2 1037 aa12.35□□□□□ -0.43
SNX1-212ENST00000560861 C1orf220Q5T0J3 134 aa12.35□□□□□ -0.43
SNX1-212ENST00000560861 CEP135Q66GS9 1140 aa12.35□□□□□ -0.43
SNX1-212ENST00000560861 NFRKBQ6P4R8 1299 aa12.35□□□□□ -0.43
SNX1-212ENST00000560861 ZPBP2Q6X784 338 aa12.35□□□□□ -0.43
SNX1-212ENST00000560861 RHPN2Q8IUC4 686 aa12.35□□□□□ -0.43
SNX1-212ENST00000560861 DRC7Q8IY82 874 aa12.35□□□□□ -0.43
SNX1-212ENST00000560861 FAM186BQ8IYM0 893 aa12.35□□□□□ -0.43
SNX1-212ENST00000560861 XXYLT1Q8NBI6 393 aa12.35□□□□□ -0.43
SNX1-212ENST00000560861 RNF149Q8NC42 400 aa12.35□□□□□ -0.43
SNX1-212ENST00000560861 PLEKHO2Q8TD55 490 aa12.35□□□□□ -0.43
SNX1-212ENST00000560861 CACTINQ8WUQ7 758 aaKnown RBP12.35□□□□□ -0.43
SNX1-212ENST00000560861 BEGAINQ9BUH8 593 aa12.35□□□□□ -0.43
SNX1-212ENST00000560861 TTYH3Q9C0H2 523 aa12.35□□□□□ -0.43
SNX1-212ENST00000560861 ADAMTS10Q9H324 1103 aa12.35□□□□□ -0.43
SNX1-212ENST00000560861 MINDY3Q9H8M7 445 aa12.35□□□□□ -0.43
SNX1-212ENST00000560861 HDAC6Q9UBN7 1215 aa12.35□□□□□ -0.43
SNX1-212ENST00000560861 ANK1P16157 1881 aa12.35□□□□□ -0.43
SNX1-212ENST00000560861 A0A0B4J269 797 aa12.34□□□□□ -0.43
SNX1-212ENST00000560861 RNF225M0QZC1 329 aaPredicted RBP12.34□□□□□ -0.43
SNX1-212ENST00000560861 FAM189A1O60320 539 aa12.34□□□□□ -0.43
SNX1-212ENST00000560861 EXOC3O60645 756 aa12.34□□□□□ -0.43
SNX1-212ENST00000560861 GYPCP04921 128 aa12.34□□□□□ -0.43
SNX1-212ENST00000560861 SRGAP2CP0DJJ0 459 aa12.34□□□□□ -0.43
SNX1-212ENST00000560861 PROZP22891 400 aa12.34□□□□□ -0.43
SNX1-212ENST00000560861 GRK4P32298 578 aa12.34□□□□□ -0.43
SNX1-212ENST00000560861 GPC3P51654 580 aa12.34□□□□□ -0.43
SNX1-212ENST00000560861 GSDMDP57764 484 aa12.34□□□□□ -0.43
SNX1-212ENST00000560861 ENPEPQ07075 957 aa12.34□□□□□ -0.43
SNX1-212ENST00000560861 KCNMA1Q12791 1236 aa12.34□□□□□ -0.43
SNX1-212ENST00000560861 SYCP1Q15431 976 aa12.34□□□□□ -0.43
SNX1-212ENST00000560861 LHX8Q68G74 356 aa12.34□□□□□ -0.43
SNX1-212ENST00000560861 CXCL17Q6UXB2 119 aa12.34□□□□□ -0.43
SNX1-212ENST00000560861 RUFY4Q6ZNE9 571 aa12.34□□□□□ -0.43
SNX1-212ENST00000560861 SESTD1Q86VW0 696 aa12.34□□□□□ -0.43
SNX1-212ENST00000560861 METTL13Q8N6R0 699 aa12.34□□□□□ -0.43
SNX1-212ENST00000560861 TC2NQ8N9U0 490 aa12.34□□□□□ -0.43
SNX1-212ENST00000560861 PPP1R13LQ8WUF5 828 aa12.34□□□□□ -0.43
SNX1-212ENST00000560861 TARS2Q9BW92 718 aaKnown RBP12.34□□□□□ -0.43
SNX1-212ENST00000560861 PCIF1Q9H4Z3 704 aa12.34□□□□□ -0.43
SNX1-212ENST00000560861 SPC25Q9HBM1 224 aa12.34□□□□□ -0.43
SNX1-212ENST00000560861 USP20Q9Y2K6 914 aa12.34□□□□□ -0.43
SNX1-212ENST00000560861 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.34□□□□□ -0.43
SNX1-212ENST00000560861 GRIN2DO15399 1336 aa12.34□□□□□ -0.43
SNX1-212ENST00000560861 A0A087WZ62 844 aa12.33□□□□□ -0.44
SNX1-212ENST00000560861 C17orf102A2RUQ5 167 aa12.33□□□□□ -0.44
SNX1-212ENST00000560861 ACKR2O00590 384 aa12.33□□□□□ -0.44
SNX1-212ENST00000560861 HNRNPDLO14979 420 aaKnown RBP12.33□□□□□ -0.44
SNX1-212ENST00000560861 KIAA0391O15091 583 aaKnown RBP12.33□□□□□ -0.44
SNX1-212ENST00000560861 TNRC18O15417 2968 aaPredicted RBP12.33□□□□□ -0.44
SNX1-212ENST00000560861 TREHO43280 583 aa12.33□□□□□ -0.44
SNX1-212ENST00000560861 VTNP04004 478 aa12.33□□□□□ -0.44
SNX1-212ENST00000560861 PRKCBP05771 671 aa12.33□□□□□ -0.44
SNX1-212ENST00000560861 PTMAP06454 111 aaKnown RBP12.33□□□□□ -0.44
SNX1-212ENST00000560861 IQCF3P0C7M6 154 aa12.33□□□□□ -0.44
SNX1-212ENST00000560861 FECHP22830 423 aa12.33□□□□□ -0.44
SNX1-212ENST00000560861 TMOD1P28289 359 aa12.33□□□□□ -0.44
SNX1-212ENST00000560861 PHKA2P46019 1235 aa12.33□□□□□ -0.44
SNX1-212ENST00000560861 KLK7P49862 253 aa12.33□□□□□ -0.44
SNX1-212ENST00000560861 CCZ1BP86790 482 aa12.33□□□□□ -0.44
SNX1-212ENST00000560861 CCZ1P86791 482 aaPredicted RBP12.33□□□□□ -0.44
SNX1-212ENST00000560861 ZNF200P98182 395 aaPredicted RBP12.33□□□□□ -0.44
SNX1-212ENST00000560861 KCNH2Q12809 1159 aa12.33□□□□□ -0.44
SNX1-212ENST00000560861 STRN3Q13033 797 aa12.33□□□□□ -0.44
SNX1-212ENST00000560861 FIGNQ5HY92 759 aa12.33□□□□□ -0.44
SNX1-212ENST00000560861 ZNF410Q86VK4 478 aa12.33□□□□□ -0.44
SNX1-212ENST00000560861 CBWD2Q8IUF1 395 aa12.33□□□□□ -0.44
SNX1-212ENST00000560861 CREBRFQ8IUR6 639 aa12.33□□□□□ -0.44
SNX1-212ENST00000560861 ZBTB8OSQ8IWT0 167 aa12.33□□□□□ -0.44
SNX1-212ENST00000560861 LRRC8AQ8IWT6 810 aa12.33□□□□□ -0.44
SNX1-212ENST00000560861 CCDC150Q8NCX0 1101 aa12.33□□□□□ -0.44
SNX1-212ENST00000560861 ZBTB45Q96K62 511 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms