RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 FNDC1Q4ZHG4 1894 aaPredicted RBP17.1■□□□□ 0.33
LYSMD2-204ENST00000560491 LCHNA4D1U4 455 aa17.09■□□□□ 0.33
LYSMD2-204ENST00000560491 GOLGA6L4A6NEF3 574 aa17.09■□□□□ 0.33
LYSMD2-204ENST00000560491 GADD45BO75293 160 aaPredicted RBP17.09■□□□□ 0.33
LYSMD2-204ENST00000560491 IDEP14735 1019 aa17.09■□□□□ 0.33
LYSMD2-204ENST00000560491 DNAJB2P25686 324 aa17.09■□□□□ 0.33
LYSMD2-204ENST00000560491 GATMP50440 423 aa17.09■□□□□ 0.33
LYSMD2-204ENST00000560491 FXR1P51114 621 aaKnown RBP eCLIP17.09■□□□□ 0.33
LYSMD2-204ENST00000560491 EFNA5P52803 228 aa17.09■□□□□ 0.33
LYSMD2-204ENST00000560491 NCKAP1LP55160 1127 aa17.09■□□□□ 0.33
LYSMD2-204ENST00000560491 PCBP1Q15365 356 aaKnown RBP eCLIP17.09■□□□□ 0.33
LYSMD2-204ENST00000560491 FAM187BQ17R55 369 aa17.09■□□□□ 0.33
LYSMD2-204ENST00000560491 UBXN11Q5T124 520 aa17.09■□□□□ 0.33
LYSMD2-204ENST00000560491 SFR1Q86XK3 245 aa17.09■□□□□ 0.33
LYSMD2-204ENST00000560491 NPAS4Q8IUM7 802 aa17.09■□□□□ 0.33
LYSMD2-204ENST00000560491 CEP57L1Q8IYX8 460 aa17.09■□□□□ 0.33
LYSMD2-204ENST00000560491 CRIPAKQ8N1N5 446 aa17.09■□□□□ 0.33
LYSMD2-204ENST00000560491 TMEM161BQ8NDZ6 487 aa17.09■□□□□ 0.33
LYSMD2-204ENST00000560491 NTPCRQ9BSD7 190 aaKnown RBP17.09■□□□□ 0.33
LYSMD2-204ENST00000560491 TRIM9Q9C026 710 aa17.09■□□□□ 0.33
LYSMD2-204ENST00000560491 BLZF1Q9H2G9 400 aa17.09■□□□□ 0.33
LYSMD2-204ENST00000560491 NKX2-4Q9H2Z4 354 aa17.09■□□□□ 0.33
LYSMD2-204ENST00000560491 MAGEF1Q9HAY2 307 aa17.09■□□□□ 0.33
LYSMD2-204ENST00000560491 DACT1Q9NYF0 836 aa17.09■□□□□ 0.33
LYSMD2-204ENST00000560491 LRFN2Q9ULH4 789 aa17.09■□□□□ 0.33
LYSMD2-204ENST00000560491 KIAA1671Q9BY89 1806 aa17.08■□□□□ 0.33
LYSMD2-204ENST00000560491 K7ENM7 598 aa17.08■□□□□ 0.32
LYSMD2-204ENST00000560491 K7ERI5 159 aa17.08■□□□□ 0.32
LYSMD2-204ENST00000560491 ACKR2O00590 384 aa17.08■□□□□ 0.32
LYSMD2-204ENST00000560491 TRAK2O60296 914 aa17.08■□□□□ 0.32
LYSMD2-204ENST00000560491 ARHGEF15O94989 841 aa17.08■□□□□ 0.32
LYSMD2-204ENST00000560491 CA3P07451 260 aa17.08■□□□□ 0.32
LYSMD2-204ENST00000560491 SLFN14P0C7P3 912 aa17.08■□□□□ 0.32
LYSMD2-204ENST00000560491 MAPTP10636 758 aaKnown RBP17.08■□□□□ 0.32
LYSMD2-204ENST00000560491 ATF7P17544 494 aaPredicted RBP17.08■□□□□ 0.32
LYSMD2-204ENST00000560491 NMT1P30419 496 aaKnown RBP17.08■□□□□ 0.32
LYSMD2-204ENST00000560491 SMTNP53814 917 aa17.08■□□□□ 0.32
LYSMD2-204ENST00000560491 FAM189BP81408 668 aa17.08■□□□□ 0.32
LYSMD2-204ENST00000560491 PRPF4BQ13523 1007 aaKnown RBP17.08■□□□□ 0.32
LYSMD2-204ENST00000560491 RAB30Q15771 203 aa17.08■□□□□ 0.32
LYSMD2-204ENST00000560491 CSPP1Q1MSJ5 1256 aa17.08■□□□□ 0.32
LYSMD2-204ENST00000560491 NT5DC1Q5TFE4 455 aa17.08■□□□□ 0.32
LYSMD2-204ENST00000560491 NOTUMQ6P988 496 aa17.08■□□□□ 0.32
LYSMD2-204ENST00000560491 FAM43BQ6ZT52 329 aaPredicted RBP17.08■□□□□ 0.32
LYSMD2-204ENST00000560491 ECHDC2Q86YB7 292 aa17.08■□□□□ 0.32
LYSMD2-204ENST00000560491 FAM178BQ8IXR5 827 aa17.08■□□□□ 0.32
LYSMD2-204ENST00000560491 RNF169Q8NCN4 708 aa17.08■□□□□ 0.32
LYSMD2-204ENST00000560491 PRIMPOLQ96LW4 560 aa17.08■□□□□ 0.32
LYSMD2-204ENST00000560491 FIZ1Q96SL8 496 aa17.08■□□□□ 0.32
LYSMD2-204ENST00000560491 YME1L1Q96TA2 773 aa17.08■□□□□ 0.32
LYSMD2-204ENST00000560491 EIF2AQ9BY44 585 aaKnown RBP17.08■□□□□ 0.32
LYSMD2-204ENST00000560491 TMEM134Q9H6X4 195 aa17.08■□□□□ 0.32
LYSMD2-204ENST00000560491 FAM105AQ9NUU6 356 aa17.08■□□□□ 0.32
LYSMD2-204ENST00000560491 TBC1D7Q9P0N9 293 aa17.08■□□□□ 0.32
LYSMD2-204ENST00000560491 MSRAQ9UJ68 235 aa17.08■□□□□ 0.32
LYSMD2-204ENST00000560491 PCDHB7Q9Y5E2 793 aa17.08■□□□□ 0.32
LYSMD2-204ENST00000560491 PCDHA11Q9Y5I1 949 aa17.08■□□□□ 0.32
LYSMD2-204ENST00000560491 A0A0U1RQF3 1178 aa17.07■□□□□ 0.32
LYSMD2-204ENST00000560491 FRMD3A2A2Y4 597 aa17.07■□□□□ 0.32
LYSMD2-204ENST00000560491 STAG3L1P0CL83 205 aa17.07■□□□□ 0.32
LYSMD2-204ENST00000560491 AXLP30530 894 aa17.07■□□□□ 0.32
LYSMD2-204ENST00000560491 ASIC1P78348 528 aa17.07■□□□□ 0.32
LYSMD2-204ENST00000560491 HTRA4P83105 476 aaPredicted RBP17.07■□□□□ 0.32
LYSMD2-204ENST00000560491 AMPD3Q01432 767 aa17.07■□□□□ 0.32
LYSMD2-204ENST00000560491 NCBP1Q09161 790 aaKnown RBP17.07■□□□□ 0.32
LYSMD2-204ENST00000560491 CUL4BQ13620 913 aa17.07■□□□□ 0.32
LYSMD2-204ENST00000560491 TMEM132AQ24JP5 1023 aa17.07■□□□□ 0.32
LYSMD2-204ENST00000560491 HAUS6Q7Z4H7 955 aa17.07■□□□□ 0.32
LYSMD2-204ENST00000560491 TMEM87AQ8NBN3 555 aa17.07■□□□□ 0.32
LYSMD2-204ENST00000560491 LPPQ93052 612 aa17.07■□□□□ 0.32
LYSMD2-204ENST00000560491 TIFAQ96CG3 184 aa17.07■□□□□ 0.32
LYSMD2-204ENST00000560491 PAGE5Q96GU1 130 aa17.07■□□□□ 0.32
LYSMD2-204ENST00000560491 RAD9AQ99638 391 aa17.07■□□□□ 0.32
LYSMD2-204ENST00000560491 C7orf25Q9BPX7 421 aa17.07■□□□□ 0.32
LYSMD2-204ENST00000560491 LRRC27Q9C0I9 530 aa17.07■□□□□ 0.32
LYSMD2-204ENST00000560491 PDZD7Q9H5P4 517 aa17.07■□□□□ 0.32
LYSMD2-204ENST00000560491 RC3H2Q9HBD1 1191 aaKnown RBP17.07■□□□□ 0.32
LYSMD2-204ENST00000560491 PANK4Q9NVE7 773 aa17.07■□□□□ 0.32
LYSMD2-204ENST00000560491 TMEM161AQ9NX61 479 aa17.07■□□□□ 0.32
LYSMD2-204ENST00000560491 PCDHB2Q9Y5E7 798 aa17.07■□□□□ 0.32
LYSMD2-204ENST00000560491 SZT2Q5T011 3432 aa17.07■□□□□ 0.32
LYSMD2-204ENST00000560491 NLRC5Q86WI3 1866 aa17.07■□□□□ 0.32
LYSMD2-204ENST00000560491 A0A1B0GUA9 196 aa17.06■□□□□ 0.32
LYSMD2-204ENST00000560491 MEIS3P2A8K0S8 358 aa17.06■□□□□ 0.32
LYSMD2-204ENST00000560491 DGKIO75912 1065 aa17.06■□□□□ 0.32
LYSMD2-204ENST00000560491 ZNF202O95125 648 aa17.06■□□□□ 0.32
LYSMD2-204ENST00000560491 NPTXRO95502 500 aa17.06■□□□□ 0.32
LYSMD2-204ENST00000560491 FGFR1P11362 822 aa17.06■□□□□ 0.32
LYSMD2-204ENST00000560491 GAP43P17677 238 aa17.06■□□□□ 0.32
LYSMD2-204ENST00000560491 COASYQ13057 564 aa17.06■□□□□ 0.32
LYSMD2-204ENST00000560491 EEF1DP3Q658K8 133 aa17.06■□□□□ 0.32
LYSMD2-204ENST00000560491 KRBA2Q6ZNG9 492 aa17.06■□□□□ 0.32
LYSMD2-204ENST00000560491 ZNF598Q86UK7 904 aaKnown RBP17.06■□□□□ 0.32
LYSMD2-204ENST00000560491 HPS3Q969F9 1004 aa17.06■□□□□ 0.32
LYSMD2-204ENST00000560491 CCDC51Q96ER9 411 aa17.06■□□□□ 0.32
LYSMD2-204ENST00000560491 TRAIPQ9BWF2 469 aa17.06■□□□□ 0.32
LYSMD2-204ENST00000560491 FGFBP2Q9BYJ0 223 aa17.06■□□□□ 0.32
LYSMD2-204ENST00000560491 ELAC1Q9H777 363 aaKnown RBP17.06■□□□□ 0.32
LYSMD2-204ENST00000560491 RNF19AQ9NV58 838 aa17.06■□□□□ 0.32
LYSMD2-204ENST00000560491 USP25Q9UHP3 1055 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms