RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 LMBR1Q8WVP7 490 aa7.54□□□□□ -1.2
HERC1-208ENST00000560462 ZC3H10Q96K80 434 aaKnown RBP7.54□□□□□ -1.2
HERC1-208ENST00000560462 ASB16Q96NS5 453 aa7.54□□□□□ -1.2
HERC1-208ENST00000560462 SPSB2Q99619 263 aa7.54□□□□□ -1.2
HERC1-208ENST00000560462 DNMT3LQ9UJW3 386 aa7.54□□□□□ -1.2
HERC1-208ENST00000560462 PRR12Q9ULL5 1215 aa7.54□□□□□ -1.2
HERC1-208ENST00000560462 KIAA1024Q9UPX6 916 aa7.54□□□□□ -1.2
HERC1-208ENST00000560462 MRVI1Q9Y6F6 885 aa7.54□□□□□ -1.2
HERC1-208ENST00000560462 LRRK2Q5S007 2527 aa7.54□□□□□ -1.2
HERC1-208ENST00000560462 COL5A1P20908 1838 aaPredicted RBP7.53□□□□□ -1.2
HERC1-208ENST00000560462 LAMA4Q16363 1823 aa7.53□□□□□ -1.2
HERC1-208ENST00000560462 MYH15Q9Y2K3 1946 aa7.53□□□□□ -1.2
HERC1-208ENST00000560462 M0R2N6 131 aa7.53□□□□□ -1.2
HERC1-208ENST00000560462 ERVH48-1M5A8F1 160 aa7.53□□□□□ -1.2
HERC1-208ENST00000560462 INPPL1O15357 1258 aa7.53□□□□□ -1.2
HERC1-208ENST00000560462 PRMT3O60678 531 aa7.53□□□□□ -1.2
HERC1-208ENST00000560462 CFBP00751 764 aa7.53□□□□□ -1.2
HERC1-208ENST00000560462 CTSAP10619 480 aa7.53□□□□□ -1.2
HERC1-208ENST00000560462 C6P13671 934 aa7.53□□□□□ -1.2
HERC1-208ENST00000560462 ITPKBP27987 946 aa7.53□□□□□ -1.2
HERC1-208ENST00000560462 RPS6P62753 249 aaKnown RBP7.53□□□□□ -1.2
HERC1-208ENST00000560462 CYP4F3Q08477 520 aa7.53□□□□□ -1.2
HERC1-208ENST00000560462 TSGA10IPQ3SY00 556 aa7.53□□□□□ -1.2
HERC1-208ENST00000560462 CCDC158Q5M9N0 1113 aa7.53□□□□□ -1.2
HERC1-208ENST00000560462 SLFN13Q68D06 897 aa7.53□□□□□ -1.2
HERC1-208ENST00000560462 ZNF574Q6ZN55 896 aaPredicted RBP7.53□□□□□ -1.2
HERC1-208ENST00000560462 LRRC55Q6ZSA7 311 aa7.53□□□□□ -1.2
HERC1-208ENST00000560462 GPR155Q7Z3F1 870 aa7.53□□□□□ -1.2
HERC1-208ENST00000560462 PRICKLE2Q7Z3G6 844 aa7.53□□□□□ -1.2
HERC1-208ENST00000560462 PIP4P1Q86T03 277 aa7.53□□□□□ -1.2
HERC1-208ENST00000560462 GLYCTKQ8IVS8 523 aa7.53□□□□□ -1.2
HERC1-208ENST00000560462 LRRC43Q8N309 656 aa7.53□□□□□ -1.2
HERC1-208ENST00000560462 TMEM169Q96HH4 297 aa7.53□□□□□ -1.2
HERC1-208ENST00000560462 EMILIN2Q9BXX0 1053 aa7.53□□□□□ -1.2
HERC1-208ENST00000560462 ADAMTS10Q9H324 1103 aa7.53□□□□□ -1.2
HERC1-208ENST00000560462 PIDD1Q9HB75 910 aa7.53□□□□□ -1.2
HERC1-208ENST00000560462 MAN1C1Q9NR34 630 aa7.53□□□□□ -1.2
HERC1-208ENST00000560462 SYNPO2Q9UMS6 1093 aa7.53□□□□□ -1.2
HERC1-208ENST00000560462 SQORQ9Y6N5 450 aa7.53□□□□□ -1.2
HERC1-208ENST00000560462 ZMYM2Q9UBW7 1377 aa7.53□□□□□ -1.2
HERC1-208ENST00000560462 CACNA1EQ15878 2313 aa7.53□□□□□ -1.2
HERC1-208ENST00000560462 MGAQ8IWI9 3026 aa7.53□□□□□ -1.2
HERC1-208ENST00000560462 FNDC1Q4ZHG4 1894 aaPredicted RBP7.53□□□□□ -1.2
HERC1-208ENST00000560462 UTP20O75691 2785 aaKnown RBP7.52□□□□□ -1.21
HERC1-208ENST00000560462 DOCK8Q8NF50 2099 aa7.52□□□□□ -1.21
HERC1-208ENST00000560462 NBPF19A0A087WUL8 3843 aa7.52□□□□□ -1.21
HERC1-208ENST00000560462 CYP2D7A0A087X1C5 515 aa7.52□□□□□ -1.21
HERC1-208ENST00000560462 BCLAF3A2AJT9 711 aaKnown RBP7.52□□□□□ -1.21
HERC1-208ENST00000560462 DENND3A2RUS2 1198 aa7.52□□□□□ -1.21
HERC1-208ENST00000560462 SORBS3O60504 671 aa7.52□□□□□ -1.21
HERC1-208ENST00000560462 ABL1P00519 1130 aa7.52□□□□□ -1.21
HERC1-208ENST00000560462 HMGB1P09429 215 aaKnown RBP7.52□□□□□ -1.21
HERC1-208ENST00000560462 SCNN1AP37088 669 aa7.52□□□□□ -1.21
HERC1-208ENST00000560462 POLGP54098 1239 aaPredicted RBP7.52□□□□□ -1.21
HERC1-208ENST00000560462 USP4Q13107 963 aa7.52□□□□□ -1.21
HERC1-208ENST00000560462 LY6DQ14210 128 aa7.52□□□□□ -1.21
HERC1-208ENST00000560462 GAS6Q14393 721 aa7.52□□□□□ -1.21
HERC1-208ENST00000560462 ELF2Q15723 593 aa7.52□□□□□ -1.21
HERC1-208ENST00000560462 STXBP2Q15833 593 aa7.52□□□□□ -1.21
HERC1-208ENST00000560462 C12orf60Q5U649 245 aa7.52□□□□□ -1.21
HERC1-208ENST00000560462 ADAMTS14Q8WXS8 1223 aa7.52□□□□□ -1.21
HERC1-208ENST00000560462 MKL1Q969V6 931 aa7.52□□□□□ -1.21
HERC1-208ENST00000560462 LIN37Q96GY3 246 aaPredicted RBP7.52□□□□□ -1.21
HERC1-208ENST00000560462 HS3ST6Q96QI5 342 aa7.52□□□□□ -1.21
HERC1-208ENST00000560462 KXD1Q9BQD3 176 aa7.52□□□□□ -1.21
HERC1-208ENST00000560462 PHF20Q9BVI0 1012 aa7.52□□□□□ -1.21
HERC1-208ENST00000560462 TMEM117Q9H0C3 514 aa7.52□□□□□ -1.21
HERC1-208ENST00000560462 TMX1Q9H3N1 280 aa7.52□□□□□ -1.21
HERC1-208ENST00000560462 ATP6V0A4Q9HBG4 840 aa7.52□□□□□ -1.21
HERC1-208ENST00000560462 DPP7Q9UHL4 492 aa7.52□□□□□ -1.21
HERC1-208ENST00000560462 DCTN4Q9UJW0 460 aa7.52□□□□□ -1.21
HERC1-208ENST00000560462 PCDHGA11Q9Y5H2 935 aa7.52□□□□□ -1.21
HERC1-208ENST00000560462 LRBAP50851 2863 aa7.51□□□□□ -1.21
HERC1-208ENST00000560462 A0A1B0GTL3 188 aa7.51□□□□□ -1.21
HERC1-208ENST00000560462 UPK3BL1B0FP48 263 aa7.51□□□□□ -1.21
HERC1-208ENST00000560462 UPK3BL2E5RIL1 263 aa7.51□□□□□ -1.21
HERC1-208ENST00000560462 PLA2G6O60733 806 aa7.51□□□□□ -1.21
HERC1-208ENST00000560462 RFPL2O75678 378 aa7.51□□□□□ -1.21
HERC1-208ENST00000560462 AKAP3O75969 853 aa7.51□□□□□ -1.21
HERC1-208ENST00000560462 LGALS2P05162 132 aa7.51□□□□□ -1.21
HERC1-208ENST00000560462 WEE1P30291 646 aa7.51□□□□□ -1.21
HERC1-208ENST00000560462 ZNF76P36508 570 aa7.51□□□□□ -1.21
HERC1-208ENST00000560462 IL12RB1P42701 662 aa7.51□□□□□ -1.21
HERC1-208ENST00000560462 SLC1A4P43007 532 aa7.51□□□□□ -1.21
HERC1-208ENST00000560462 METAP2P50579 478 aaKnown RBP eCLIP7.51□□□□□ -1.21
HERC1-208ENST00000560462 FAM193AP78312 1265 aa7.51□□□□□ -1.21
HERC1-208ENST00000560462 MRPS6P82932 125 aaKnown RBP7.51□□□□□ -1.21
HERC1-208ENST00000560462 PLK5Q496M5 336 aa7.51□□□□□ -1.21
HERC1-208ENST00000560462 OXLD1Q5BKU9 147 aa7.51□□□□□ -1.21
HERC1-208ENST00000560462 CELF3Q5SZQ8 465 aaKnown RBP7.51□□□□□ -1.21
HERC1-208ENST00000560462 IER5Q5VY09 327 aa7.51□□□□□ -1.21
HERC1-208ENST00000560462 ADGRD1Q6QNK2 874 aa7.51□□□□□ -1.21
HERC1-208ENST00000560462 SLC24A5Q71RS6 500 aa7.51□□□□□ -1.21
HERC1-208ENST00000560462 FMNL3Q8IVF7 1028 aa7.51□□□□□ -1.21
HERC1-208ENST00000560462 ABI1Q8IZP0 508 aa7.51□□□□□ -1.21
HERC1-208ENST00000560462 TPCN2Q8NHX9 752 aa7.51□□□□□ -1.21
HERC1-208ENST00000560462 DNAJB3Q8WWF6 145 aa7.51□□□□□ -1.21
HERC1-208ENST00000560462 CLEC4DQ8WXI8 215 aa7.51□□□□□ -1.21
HERC1-208ENST00000560462 ZNF707Q96C28 371 aaPredicted RBP7.51□□□□□ -1.21
HERC1-208ENST00000560462 WBP1Q96G27 269 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms