RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 CHST13Q8NET6 341 aa10.54□□□□□ -0.72
RTF1-206ENST00000560447 DNERQ8NFT8 737 aa10.54□□□□□ -0.72
RTF1-206ENST00000560447 MORC4Q8TE76 937 aa10.54□□□□□ -0.72
RTF1-206ENST00000560447 AENQ8WTP8 325 aaKnown RBP10.54□□□□□ -0.72
RTF1-206ENST00000560447 ATG4CQ96DT6 458 aa10.54□□□□□ -0.72
RTF1-206ENST00000560447 TEX13BQ9BXU2 312 aa10.54□□□□□ -0.72
RTF1-206ENST00000560447 ACAD9Q9H845 621 aa10.54□□□□□ -0.72
RTF1-206ENST00000560447 TMOD4Q9NZQ9 345 aa10.54□□□□□ -0.72
RTF1-206ENST00000560447 STIM2Q9P246 746 aa10.54□□□□□ -0.72
RTF1-206ENST00000560447 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.54□□□□□ -0.72
RTF1-206ENST00000560447 DNAJC12Q9UKB3 198 aa10.54□□□□□ -0.72
RTF1-206ENST00000560447 TTC7AQ9ULT0 858 aaPredicted RBP10.54□□□□□ -0.72
RTF1-206ENST00000560447 COQ4Q9Y3A0 265 aa10.54□□□□□ -0.72
RTF1-206ENST00000560447 LCTP09848 1927 aa10.54□□□□□ -0.72
RTF1-206ENST00000560447 SSC5DA1L4H1 1573 aa10.53□□□□□ -0.72
RTF1-206ENST00000560447 ANKRD62A6NC57 917 aa10.53□□□□□ -0.72
RTF1-206ENST00000560447 DDX39AO00148 427 aaKnown RBP10.53□□□□□ -0.72
RTF1-206ENST00000560447 DDX3XO00571 662 aaKnown RBP eCLIP10.53□□□□□ -0.72
RTF1-206ENST00000560447 ZBTB39O15060 712 aa10.53□□□□□ -0.72
RTF1-206ENST00000560447 ZNF185O15231 689 aa10.53□□□□□ -0.72
RTF1-206ENST00000560447 BUB1O43683 1085 aa10.53□□□□□ -0.72
RTF1-206ENST00000560447 DGAT1O75907 488 aa10.53□□□□□ -0.72
RTF1-206ENST00000560447 KIF4AO95239 1232 aa10.53□□□□□ -0.72
RTF1-206ENST00000560447 ERCC3P19447 782 aa10.53□□□□□ -0.72
RTF1-206ENST00000560447 GARTP22102 1010 aa10.53□□□□□ -0.72
RTF1-206ENST00000560447 ICAM3P32942 547 aa10.53□□□□□ -0.72
RTF1-206ENST00000560447 APBA1Q02410 837 aa10.53□□□□□ -0.72
RTF1-206ENST00000560447 C2orf54Q08AI8 447 aa10.53□□□□□ -0.72
RTF1-206ENST00000560447 DMP1Q13316 513 aaPredicted RBP10.53□□□□□ -0.72
RTF1-206ENST00000560447 BAATQ14032 418 aaPredicted RBP10.53□□□□□ -0.72
RTF1-206ENST00000560447 DRAP1Q14919 205 aaPredicted RBP10.53□□□□□ -0.72
RTF1-206ENST00000560447 XKR9Q5GH70 373 aa10.53□□□□□ -0.72
RTF1-206ENST00000560447 NBPF12Q5TAG4 269 aaPredicted RBP10.53□□□□□ -0.72
RTF1-206ENST00000560447 C8orf74Q6P047 294 aa10.53□□□□□ -0.72
RTF1-206ENST00000560447 ENOSF1Q7L5Y1 443 aa10.53□□□□□ -0.72
RTF1-206ENST00000560447 RHOT2Q8IXI1 618 aa10.53□□□□□ -0.72
RTF1-206ENST00000560447 IFT20Q8IY31 132 aa10.53□□□□□ -0.72
RTF1-206ENST00000560447 TPCN2Q8NHX9 752 aa10.53□□□□□ -0.72
RTF1-206ENST00000560447 LMO3Q8TAP4 145 aa10.53□□□□□ -0.72
RTF1-206ENST00000560447 RFFLQ8WZ73 363 aa10.53□□□□□ -0.72
RTF1-206ENST00000560447 CAVIN3Q969G5 261 aa10.53□□□□□ -0.72
RTF1-206ENST00000560447 KLRG1Q96E93 195 aa10.53□□□□□ -0.72
RTF1-206ENST00000560447 FBXL18Q96ME1 805 aa10.53□□□□□ -0.72
RTF1-206ENST00000560447 KIAA1586Q9HCI6 787 aa10.53□□□□□ -0.72
RTF1-206ENST00000560447 HSPBP1Q9NZL4 362 aa10.53□□□□□ -0.72
RTF1-206ENST00000560447 FBXO40Q9UH90 709 aa10.53□□□□□ -0.72
RTF1-206ENST00000560447 TMEM59LQ9UK28 342 aa10.53□□□□□ -0.72
RTF1-206ENST00000560447 ZNF214Q9UL59 606 aaPredicted RBP10.53□□□□□ -0.72
RTF1-206ENST00000560447 CCDC66A2RUB6 948 aa10.52□□□□□ -0.73
RTF1-206ENST00000560447 ZC3H11AO75152 810 aaKnown RBP eCLIP10.52□□□□□ -0.73
RTF1-206ENST00000560447 TFRCP02786 760 aaKnown RBP10.52□□□□□ -0.73
RTF1-206ENST00000560447 MYCLP12524 364 aaPredicted RBP10.52□□□□□ -0.73
RTF1-206ENST00000560447 KCNA2P16389 499 aa10.52□□□□□ -0.73
RTF1-206ENST00000560447 TNFAIP3P21580 790 aa10.52□□□□□ -0.73
RTF1-206ENST00000560447 CYP2C19P33261 490 aa10.52□□□□□ -0.73
RTF1-206ENST00000560447 ARID5AQ03989 594 aa10.52□□□□□ -0.73
RTF1-206ENST00000560447 TBC1D10BQ4KMP7 808 aaPredicted RBP10.52□□□□□ -0.73
RTF1-206ENST00000560447 CBWD6Q4V339 395 aa10.52□□□□□ -0.73
RTF1-206ENST00000560447 CBWD3Q5JTY5 395 aa10.52□□□□□ -0.73
RTF1-206ENST00000560447 CBWD5Q5RIA9 395 aa10.52□□□□□ -0.73
RTF1-206ENST00000560447 ALS2CLQ60I27 953 aa10.52□□□□□ -0.73
RTF1-206ENST00000560447 SNRNP48Q6IEG0 339 aaKnown RBP10.52□□□□□ -0.73
RTF1-206ENST00000560447 NSMFQ6X4W1 530 aa10.52□□□□□ -0.73
RTF1-206ENST00000560447 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.52□□□□□ -0.73
RTF1-206ENST00000560447 ZNF771Q7L3S4 317 aaPredicted RBP10.52□□□□□ -0.73
RTF1-206ENST00000560447 SAMD7Q7Z3H4 446 aa10.52□□□□□ -0.73
RTF1-206ENST00000560447 RASGEF1CQ8N431 466 aa10.52□□□□□ -0.73
RTF1-206ENST00000560447 ANKRD13CQ8N6S4 541 aa10.52□□□□□ -0.73
RTF1-206ENST00000560447 USP38Q8NB14 1042 aa10.52□□□□□ -0.73
RTF1-206ENST00000560447 TMEM161BQ8NDZ6 487 aa10.52□□□□□ -0.73
RTF1-206ENST00000560447 CTNNBL1Q8WYA6 563 aaPredicted RBP10.52□□□□□ -0.73
RTF1-206ENST00000560447 DHX38Q92620 1227 aaKnown RBP10.52□□□□□ -0.73
RTF1-206ENST00000560447 WRNIP1Q96S55 665 aa10.52□□□□□ -0.73
RTF1-206ENST00000560447 KCNK17Q96T54 332 aa10.52□□□□□ -0.73
RTF1-206ENST00000560447 NAP1L3Q99457 506 aaPredicted RBP10.52□□□□□ -0.73
RTF1-206ENST00000560447 PDLIM7Q9NR12 457 aa10.52□□□□□ -0.73
RTF1-206ENST00000560447 HPCAL4Q9UM19 191 aa10.52□□□□□ -0.73
RTF1-206ENST00000560447 TBX20Q9UMR3 447 aa10.52□□□□□ -0.73
RTF1-206ENST00000560447 EMSYQ7Z589 1322 aa10.52□□□□□ -0.73
RTF1-206ENST00000560447 IGSF9BQ9UPX0 1349 aa10.52□□□□□ -0.73
RTF1-206ENST00000560447 TESPA1A2RU30 521 aaPredicted RBP10.51□□□□□ -0.73
RTF1-206ENST00000560447 A6NNZ2 444 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 MIF4GDA9UHW6 222 aaKnown RBP10.51□□□□□ -0.73
RTF1-206ENST00000560447 SPATA31C2B4DYI2 1134 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 PGRMC1O00264 195 aaKnown RBP10.51□□□□□ -0.73
RTF1-206ENST00000560447 BACH1O14867 736 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 MTA2O94776 668 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 CCNE2O96020 404 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 EGFRP00533 1210 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 GZMAP12544 262 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 HSPA6P17066 643 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 COPB2P35606 906 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 NOP2P46087 812 aaKnown RBP10.51□□□□□ -0.73
RTF1-206ENST00000560447 MXI1P50539 228 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 GALCP54803 685 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 MFAP3P55082 362 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 PAK2Q13177 524 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 TUBB8Q3ZCM7 444 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 BRDTQ58F21 947 aaPredicted RBP10.51□□□□□ -0.73
RTF1-206ENST00000560447 XKR3Q5GH77 459 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms