RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 ZNF623O75123 536 aa16.85■□□□□ 0.29
SNRPA1-210ENST00000560383 CSPG5O95196 566 aa16.85■□□□□ 0.29
SNRPA1-210ENST00000560383 GLRA2P23416 452 aa16.85■□□□□ 0.29
SNRPA1-210ENST00000560383 HOXA11P31270 313 aaPredicted RBP16.85■□□□□ 0.29
SNRPA1-210ENST00000560383 CCT6AP40227 531 aaKnown RBP16.85■□□□□ 0.29
SNRPA1-210ENST00000560383 PHKA2P46019 1235 aa16.85■□□□□ 0.29
SNRPA1-210ENST00000560383 NRIP1P48552 1158 aa16.85■□□□□ 0.29
SNRPA1-210ENST00000560383 COASYQ13057 564 aa16.85■□□□□ 0.29
SNRPA1-210ENST00000560383 THNSL1Q8IYQ7 743 aa16.85■□□□□ 0.29
SNRPA1-210ENST00000560383 SMRP1Q8NCR6 262 aa16.85■□□□□ 0.29
SNRPA1-210ENST00000560383 ASAP3Q8TDY4 903 aa16.85■□□□□ 0.29
SNRPA1-210ENST00000560383 CASD1Q96PB1 797 aa16.85■□□□□ 0.29
SNRPA1-210ENST00000560383 MMTAG2Q9BU76 263 aaKnown RBP16.85■□□□□ 0.29
SNRPA1-210ENST00000560383 IGFLR1Q9H665 355 aa16.85■□□□□ 0.29
SNRPA1-210ENST00000560383 HCN4Q9Y3Q4 1203 aa16.85■□□□□ 0.29
SNRPA1-210ENST00000560383 PRR33A8MZF0 331 aa16.84■□□□□ 0.29
SNRPA1-210ENST00000560383 DCXO43602 365 aa16.84■□□□□ 0.29
SNRPA1-210ENST00000560383 USO1O60763 962 aaKnown RBP16.84■□□□□ 0.29
SNRPA1-210ENST00000560383 GLP2RO95838 553 aa16.84■□□□□ 0.29
SNRPA1-210ENST00000560383 CYP11B2P19099 503 aa16.84■□□□□ 0.29
SNRPA1-210ENST00000560383 SYT1P21579 422 aa16.84■□□□□ 0.29
SNRPA1-210ENST00000560383 CAPSQ13938 189 aa16.84■□□□□ 0.29
SNRPA1-210ENST00000560383 TFDP1Q14186 410 aa16.84■□□□□ 0.29
SNRPA1-210ENST00000560383 KRT79Q5XKE5 535 aa16.84■□□□□ 0.29
SNRPA1-210ENST00000560383 PADI6Q6TGC4 694 aa16.84■□□□□ 0.29
SNRPA1-210ENST00000560383 SNX29Q8TEQ0 813 aa16.84■□□□□ 0.29
SNRPA1-210ENST00000560383 CLEC1BQ9P126 229 aa16.84■□□□□ 0.29
SNRPA1-210ENST00000560383 HCSTQ9UBK5 93 aa16.84■□□□□ 0.29
SNRPA1-210ENST00000560383 PIN4Q9Y237 131 aaKnown RBP16.84■□□□□ 0.29
SNRPA1-210ENST00000560383 ARHGEF35A5YM69 484 aa16.83■□□□□ 0.28
SNRPA1-210ENST00000560383 CARNS1A5YM72 827 aa16.83■□□□□ 0.28
SNRPA1-210ENST00000560383 PP2D1A8MPX8 630 aa16.83■□□□□ 0.28
SNRPA1-210ENST00000560383 FSCN2O14926 492 aa16.83■□□□□ 0.28
SNRPA1-210ENST00000560383 BMP15O95972 392 aa16.83■□□□□ 0.28
SNRPA1-210ENST00000560383 SKIP12755 728 aa16.83■□□□□ 0.28
SNRPA1-210ENST00000560383 PLA2G5P39877 138 aa16.83■□□□□ 0.28
SNRPA1-210ENST00000560383 RAB27AP51159 221 aa16.83■□□□□ 0.28
SNRPA1-210ENST00000560383 CLUL1Q15846 466 aa16.83■□□□□ 0.28
SNRPA1-210ENST00000560383 CLLU1OSQ5K130 101 aa16.83■□□□□ 0.28
SNRPA1-210ENST00000560383 HYIQ5T013 277 aa16.83■□□□□ 0.28
SNRPA1-210ENST00000560383 TWF2Q6IBS0 349 aaKnown RBP16.83■□□□□ 0.28
SNRPA1-210ENST00000560383 LRRC55Q6ZSA7 311 aa16.83■□□□□ 0.28
SNRPA1-210ENST00000560383 KCTD17Q8N5Z5 321 aa16.83■□□□□ 0.28
SNRPA1-210ENST00000560383 MRPS27Q92552 414 aaKnown RBP16.83■□□□□ 0.28
SNRPA1-210ENST00000560383 ZNF558Q96NG5 402 aa16.83■□□□□ 0.28
SNRPA1-210ENST00000560383 MRPL9Q9BYD2 267 aaKnown RBP16.83■□□□□ 0.28
SNRPA1-210ENST00000560383 POLR3FQ9H1D9 316 aaPredicted RBP16.83■□□□□ 0.28
SNRPA1-210ENST00000560383 TLE6Q9H808 572 aa16.83■□□□□ 0.28
SNRPA1-210ENST00000560383 GPRC5CQ9NQ84 441 aa16.83■□□□□ 0.28
SNRPA1-210ENST00000560383 FAM105AQ9NUU6 356 aa16.83■□□□□ 0.28
SNRPA1-210ENST00000560383 DDX19AQ9NUU7 478 aaKnown RBP16.83■□□□□ 0.28
SNRPA1-210ENST00000560383 RAPGEFL1Q9UHV5 662 aa16.83■□□□□ 0.28
SNRPA1-210ENST00000560383 PUF60Q9UHX1 559 aaKnown RBP16.83■□□□□ 0.28
SNRPA1-210ENST00000560383 KIAA1024Q9UPX6 916 aa16.83■□□□□ 0.28
SNRPA1-210ENST00000560383 VPS37CA5D8V6 355 aaPredicted RBP16.82■□□□□ 0.28
SNRPA1-210ENST00000560383 TSPAN1O60635 241 aa16.82■□□□□ 0.28
SNRPA1-210ENST00000560383 CDC25AP30304 524 aa16.82■□□□□ 0.28
SNRPA1-210ENST00000560383 AXLP30530 894 aa16.82■□□□□ 0.28
SNRPA1-210ENST00000560383 MBTD1Q05BQ5 628 aa16.82■□□□□ 0.28
SNRPA1-210ENST00000560383 AMHR2Q16671 573 aa16.82■□□□□ 0.28
SNRPA1-210ENST00000560383 DUSP6Q16828 381 aa16.82■□□□□ 0.28
SNRPA1-210ENST00000560383 KCNT2Q6UVM3 1135 aa16.82■□□□□ 0.28
SNRPA1-210ENST00000560383 MRPL10Q7Z7H8 261 aaKnown RBP16.82■□□□□ 0.28
SNRPA1-210ENST00000560383 MICAL1Q8TDZ2 1067 aa16.82■□□□□ 0.28
SNRPA1-210ENST00000560383 BHMT2Q9H2M3 363 aa16.82■□□□□ 0.28
SNRPA1-210ENST00000560383 NGRNQ9NPE2 291 aaKnown RBP16.82■□□□□ 0.28
SNRPA1-210ENST00000560383 FAM86C2PA6NEL3 165 aa16.81■□□□□ 0.28
SNRPA1-210ENST00000560383 SRGAP2BP0DMP2 458 aa16.81■□□□□ 0.28
SNRPA1-210ENST00000560383 ERVFC1P60507 584 aa16.81■□□□□ 0.28
SNRPA1-210ENST00000560383 KRT17Q04695 432 aa16.81■□□□□ 0.28
SNRPA1-210ENST00000560383 RESTQ13127 1097 aa16.81■□□□□ 0.28
SNRPA1-210ENST00000560383 UBXN11Q5T124 520 aa16.81■□□□□ 0.28
SNRPA1-210ENST00000560383 CDCA2Q69YH5 1023 aaPredicted RBP16.81■□□□□ 0.28
SNRPA1-210ENST00000560383 TMEM184AQ6ZMB5 413 aa16.81■□□□□ 0.28
SNRPA1-210ENST00000560383 RBM23Q86U06 439 aaKnown RBP16.81■□□□□ 0.28
SNRPA1-210ENST00000560383 CCDC51Q96ER9 411 aa16.81■□□□□ 0.28
SNRPA1-210ENST00000560383 AK8Q96MA6 479 aa16.81■□□□□ 0.28
SNRPA1-210ENST00000560383 BARX2Q9UMQ3 279 aaPredicted RBP16.81■□□□□ 0.28
SNRPA1-210ENST00000560383 DNM3Q9UQ16 869 aa16.81■□□□□ 0.28
SNRPA1-210ENST00000560383 PCDHGC5Q9Y5F6 944 aa16.81■□□□□ 0.28
SNRPA1-210ENST00000560383 VWA3AA6NCI4 1184 aa16.8■□□□□ 0.28
SNRPA1-210ENST00000560383 INO80B-WBP1J3KQ70 363 aa16.8■□□□□ 0.28
SNRPA1-210ENST00000560383 SLC26A4O43511 780 aa16.8■□□□□ 0.28
SNRPA1-210ENST00000560383 ERLIN2O94905 339 aa16.8■□□□□ 0.28
SNRPA1-210ENST00000560383 KCNC3Q14003 757 aa16.8■□□□□ 0.28
SNRPA1-210ENST00000560383 MAEAQ7L5Y9 396 aa16.8■□□□□ 0.28
SNRPA1-210ENST00000560383 RNF169Q8NCN4 708 aa16.8■□□□□ 0.28
SNRPA1-210ENST00000560383 BSNDQ8WZ55 320 aa16.8■□□□□ 0.28
SNRPA1-210ENST00000560383 TCF25Q9BQ70 676 aa16.8■□□□□ 0.28
SNRPA1-210ENST00000560383 SPG21Q9NZD8 308 aa16.8■□□□□ 0.28
SNRPA1-210ENST00000560383 MTMR6Q9Y217 621 aa16.8■□□□□ 0.28
SNRPA1-210ENST00000560383 PCDHB2Q9Y5E7 798 aa16.8■□□□□ 0.28
SNRPA1-210ENST00000560383 WDFY4Q6ZS81 3184 aa16.8■□□□□ 0.28
SNRPA1-210ENST00000560383 E9PMD0 336 aa16.79■□□□□ 0.28
SNRPA1-210ENST00000560383 SF3A1Q15459 793 aaKnown RBP16.79■□□□□ 0.28
SNRPA1-210ENST00000560383 FAM187BQ17R55 369 aa16.79■□□□□ 0.28
SNRPA1-210ENST00000560383 HERC4Q5GLZ8 1057 aaPredicted RBP16.79■□□□□ 0.28
SNRPA1-210ENST00000560383 NOTUMQ6P988 496 aa16.79■□□□□ 0.28
SNRPA1-210ENST00000560383 KCNK18Q7Z418 384 aa16.79■□□□□ 0.28
SNRPA1-210ENST00000560383 SLC39A11Q8N1S5 342 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms