RNA–Protein interactions for RNA: ENST00000560379.1

USP8-210, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-210ENST00000560379 C4AP0C0L4 1744 aa7.11□□□□□ -1.27
USP8-210ENST00000560379 PMM2O15305 246 aa7.11□□□□□ -1.27
USP8-210ENST00000560379 PCDHGA12O60330 932 aa7.11□□□□□ -1.27
USP8-210ENST00000560379 LRIG2O94898 1065 aa7.11□□□□□ -1.27
USP8-210ENST00000560379 SOD2P04179 222 aa7.11□□□□□ -1.27
USP8-210ENST00000560379 CEACAM5P06731 702 aa7.11□□□□□ -1.27
USP8-210ENST00000560379 SRGAP2CP0DJJ0 459 aa7.11□□□□□ -1.27
USP8-210ENST00000560379 VCAM1P19320 739 aa7.11□□□□□ -1.27
USP8-210ENST00000560379 ITIH2P19823 946 aa7.11□□□□□ -1.27
USP8-210ENST00000560379 ATICP31939 592 aa7.11□□□□□ -1.27
USP8-210ENST00000560379 DDIT3P35638 169 aa7.11□□□□□ -1.27
USP8-210ENST00000560379 GPR85P60893 370 aa7.11□□□□□ -1.27
USP8-210ENST00000560379 KRT85P78386 507 aa7.11□□□□□ -1.27
USP8-210ENST00000560379 SNW1Q13573 536 aaKnown RBP7.11□□□□□ -1.27
USP8-210ENST00000560379 TXNRD1Q16881 649 aa7.11□□□□□ -1.27
USP8-210ENST00000560379 GJC2Q5T442 439 aaPredicted RBP7.11□□□□□ -1.27
USP8-210ENST00000560379 MFSD2AQ8NA29 543 aa7.11□□□□□ -1.27
USP8-210ENST00000560379 FRS2Q8WU20 508 aa7.11□□□□□ -1.27
USP8-210ENST00000560379 SLC5A5Q92911 643 aa7.11□□□□□ -1.27
USP8-210ENST00000560379 DUSP23Q9BVJ7 150 aa7.11□□□□□ -1.27
USP8-210ENST00000560379 PIDD1Q9HB75 910 aa7.11□□□□□ -1.27
USP8-210ENST00000560379 GFOD1Q9NXC2 390 aa7.11□□□□□ -1.27
USP8-210ENST00000560379 PGAP2Q9UHJ9 254 aa7.11□□□□□ -1.27
USP8-210ENST00000560379 ISY1Q9ULR0 285 aaKnown RBP7.11□□□□□ -1.27
USP8-210ENST00000560379 PHTF1Q9UMS5 762 aa7.11□□□□□ -1.27
USP8-210ENST00000560379 SF3B6Q9Y3B4 125 aaKnown RBP7.11□□□□□ -1.27
USP8-210ENST00000560379 IPPQ9Y573 584 aa7.11□□□□□ -1.27
USP8-210ENST00000560379 PCDHGA9Q9Y5G4 932 aaKnown RBP7.11□□□□□ -1.27
USP8-210ENST00000560379 PCDHGA8Q9Y5G5 932 aa7.11□□□□□ -1.27
USP8-210ENST00000560379 PCDHGA7Q9Y5G6 932 aa7.11□□□□□ -1.27
USP8-210ENST00000560379 PCDHGA6Q9Y5G7 932 aa7.11□□□□□ -1.27
USP8-210ENST00000560379 PCDHGA3Q9Y5H0 932 aa7.11□□□□□ -1.27
USP8-210ENST00000560379 PCDHGA2Q9Y5H1 932 aa7.11□□□□□ -1.27
USP8-210ENST00000560379 RNMTO43148 476 aaKnown RBP7.1□□□□□ -1.27
USP8-210ENST00000560379 TYRP1P17643 537 aa7.1□□□□□ -1.27
USP8-210ENST00000560379 MECP2P51608 486 aaKnown RBP7.1□□□□□ -1.27
USP8-210ENST00000560379 HTRA3P83110 453 aa7.1□□□□□ -1.27
USP8-210ENST00000560379 TAF11Q15544 211 aa7.1□□□□□ -1.27
USP8-210ENST00000560379 EZH2Q15910 746 aaKnown RBP7.1□□□□□ -1.27
USP8-210ENST00000560379 AOC3Q16853 763 aa7.1□□□□□ -1.27
USP8-210ENST00000560379 CFAP161Q6P656 301 aa7.1□□□□□ -1.27
USP8-210ENST00000560379 C16orf54Q6UWD8 224 aa7.1□□□□□ -1.27
USP8-210ENST00000560379 RSPO2Q6UXX9 243 aaPredicted RBP7.1□□□□□ -1.27
USP8-210ENST00000560379 RASSF3Q86WH2 238 aa7.1□□□□□ -1.27
USP8-210ENST00000560379 SMYD4Q8IYR2 804 aaPredicted RBP7.1□□□□□ -1.27
USP8-210ENST00000560379 CHCHD4Q8N4Q1 142 aa7.1□□□□□ -1.27
USP8-210ENST00000560379 PCDH19Q8TAB3 1148 aa7.1□□□□□ -1.27
USP8-210ENST00000560379 PARD3BQ8TEW8 1205 aa7.1□□□□□ -1.27
USP8-210ENST00000560379 PIGBQ92521 554 aa7.1□□□□□ -1.27
USP8-210ENST00000560379 RTF1Q92541 710 aaKnown RBP7.1□□□□□ -1.27
USP8-210ENST00000560379 GJA10Q969M2 543 aa7.1□□□□□ -1.27
USP8-210ENST00000560379 PGBD4Q96DM1 585 aa7.1□□□□□ -1.27
USP8-210ENST00000560379 PHACTR3Q96KR7 559 aa7.1□□□□□ -1.27
USP8-210ENST00000560379 ASPNQ9BXN1 380 aa7.1□□□□□ -1.27
USP8-210ENST00000560379 CELF4Q9BZC1 486 aaKnown RBP7.1□□□□□ -1.27
USP8-210ENST00000560379 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.1□□□□□ -1.27
USP8-210ENST00000560379 RIC8AQ9NPQ8 531 aa7.1□□□□□ -1.27
USP8-210ENST00000560379 PLCB1Q9NQ66 1216 aa7.1□□□□□ -1.27
USP8-210ENST00000560379 H2AFY2Q9P0M6 372 aaPredicted RBP7.1□□□□□ -1.27
USP8-210ENST00000560379 SCN7AQ01118 1682 aa7.09□□□□□ -1.27
USP8-210ENST00000560379 PTPDC1A2A3K4 754 aa7.09□□□□□ -1.27
USP8-210ENST00000560379 XPOTO43592 962 aaKnown RBP7.09□□□□□ -1.27
USP8-210ENST00000560379 MSCO60682 206 aa7.09□□□□□ -1.27
USP8-210ENST00000560379 THBDP07204 575 aa7.09□□□□□ -1.27
USP8-210ENST00000560379 HSPA6P17066 643 aa7.09□□□□□ -1.27
USP8-210ENST00000560379 ADCY1Q08828 1119 aa7.09□□□□□ -1.27
USP8-210ENST00000560379 TEFQ10587 303 aa7.09□□□□□ -1.27
USP8-210ENST00000560379 LRRC32Q14392 662 aa7.09□□□□□ -1.27
USP8-210ENST00000560379 KRT72Q14CN4 511 aa7.09□□□□□ -1.27
USP8-210ENST00000560379 IFI16Q16666 785 aaKnown RBP7.09□□□□□ -1.27
USP8-210ENST00000560379 DACT2Q5SW24 774 aa7.09□□□□□ -1.27
USP8-210ENST00000560379 BROXQ5VW32 411 aa7.09□□□□□ -1.27
USP8-210ENST00000560379 ARMC3Q5W041 872 aa7.09□□□□□ -1.27
USP8-210ENST00000560379 TSHZ3Q63HK5 1081 aa7.09□□□□□ -1.27
USP8-210ENST00000560379 LVRNQ6Q4G3 990 aa7.09□□□□□ -1.27
USP8-210ENST00000560379 FAM214BQ7L5A3 538 aa7.09□□□□□ -1.27
USP8-210ENST00000560379 PTF1AQ7RTS3 328 aa7.09□□□□□ -1.27
USP8-210ENST00000560379 CDH24Q86UP0 819 aa7.09□□□□□ -1.27
USP8-210ENST00000560379 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.09□□□□□ -1.27
USP8-210ENST00000560379 CLASRPQ8N2M8 674 aaKnown RBP7.09□□□□□ -1.27
USP8-210ENST00000560379 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.09□□□□□ -1.27
USP8-210ENST00000560379 RNF141Q8WVD5 230 aa7.09□□□□□ -1.27
USP8-210ENST00000560379 HEXIM2Q96MH2 286 aaKnown RBP7.09□□□□□ -1.27
USP8-210ENST00000560379 SCLT1Q96NL6 688 aa7.09□□□□□ -1.27
USP8-210ENST00000560379 DSCC1Q9BVC3 393 aa7.09□□□□□ -1.27
USP8-210ENST00000560379 MKNK2Q9HBH9 465 aa7.09□□□□□ -1.27
USP8-210ENST00000560379 NMRK2Q9NPI5 230 aa7.09□□□□□ -1.27
USP8-210ENST00000560379 GPRC5CQ9NQ84 441 aa7.09□□□□□ -1.27
USP8-210ENST00000560379 PRDM7Q9NQW5 492 aa7.09□□□□□ -1.27
USP8-210ENST00000560379 GPR27Q9NS67 375 aa7.09□□□□□ -1.27
USP8-210ENST00000560379 C1orf112Q9NSG2 853 aa7.09□□□□□ -1.27
USP8-210ENST00000560379 PRR13Q9NZ81 148 aa7.09□□□□□ -1.27
USP8-210ENST00000560379 CCNL1Q9UK58 526 aaPredicted RBP7.09□□□□□ -1.27
USP8-210ENST00000560379 ODF2LQ9ULJ1 636 aa7.09□□□□□ -1.27
USP8-210ENST00000560379 ZNF652Q9Y2D9 606 aa7.09□□□□□ -1.27
USP8-210ENST00000560379 NPFFR2Q9Y5X5 522 aa7.09□□□□□ -1.27
USP8-210ENST00000560379 SRCAPQ6ZRS2 3230 aa7.09□□□□□ -1.27
USP8-210ENST00000560379 CNTNAP4Q9C0A0 1308 aa7.08□□□□□ -1.28
USP8-210ENST00000560379 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.08□□□□□ -1.28
USP8-210ENST00000560379 hCG_1984214I3L0E3 225 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms