RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 TSPAN1O60635 241 aa20.98■□□□□ 0.95
CDC42BPB-206ENST00000559790 CTSAP10619 480 aa20.98■□□□□ 0.95
CDC42BPB-206ENST00000559790 GLB1LQ6UWU2 654 aa20.98■□□□□ 0.95
CDC42BPB-206ENST00000559790 DDX53Q86TM3 631 aaKnown RBP20.98■□□□□ 0.95
CDC42BPB-206ENST00000559790 IFNLR1Q8IU57 520 aaPredicted RBP20.98■□□□□ 0.95
CDC42BPB-206ENST00000559790 RSPH1Q8WYR4 309 aa20.98■□□□□ 0.95
CDC42BPB-206ENST00000559790 MTMR9Q96QG7 549 aa20.98■□□□□ 0.95
CDC42BPB-206ENST00000559790 EIF2AK1Q9BQI3 630 aaKnown RBP20.98■□□□□ 0.95
CDC42BPB-206ENST00000559790 TMEM60Q9H2L4 133 aa20.98■□□□□ 0.95
CDC42BPB-206ENST00000559790 TMEM221A6NGB7 291 aa20.97■□□□□ 0.95
CDC42BPB-206ENST00000559790 M0R296 226 aa20.97■□□□□ 0.95
CDC42BPB-206ENST00000559790 SRGAP2CP0DJJ0 459 aa20.97■□□□□ 0.95
CDC42BPB-206ENST00000559790 EPCAMP16422 314 aa20.97■□□□□ 0.95
CDC42BPB-206ENST00000559790 HOXB8P17481 243 aaPredicted RBP20.97■□□□□ 0.95
CDC42BPB-206ENST00000559790 ALDH7A1P49419 539 aaKnown RBP20.97■□□□□ 0.95
CDC42BPB-206ENST00000559790 NHLH1Q02575 133 aa20.97■□□□□ 0.95
CDC42BPB-206ENST00000559790 CAPSQ13938 189 aa20.97■□□□□ 0.95
CDC42BPB-206ENST00000559790 PTPN14Q15678 1187 aa20.97■□□□□ 0.95
CDC42BPB-206ENST00000559790 XKR9Q5GH70 373 aa20.97■□□□□ 0.95
CDC42BPB-206ENST00000559790 SLFN12Q8IYM2 578 aa20.97■□□□□ 0.95
CDC42BPB-206ENST00000559790 RNF149Q8NC42 400 aa20.97■□□□□ 0.95
CDC42BPB-206ENST00000559790 TMEM169Q96HH4 297 aa20.97■□□□□ 0.95
CDC42BPB-206ENST00000559790 EIF2AQ9BY44 585 aaKnown RBP20.97■□□□□ 0.95
CDC42BPB-206ENST00000559790 ZSWIM4Q9H7M6 989 aa20.97■□□□□ 0.95
CDC42BPB-206ENST00000559790 MARCH5Q9NX47 278 aa20.97■□□□□ 0.95
CDC42BPB-206ENST00000559790 MYH11P35749 1972 aa20.96■□□□□ 0.95
CDC42BPB-206ENST00000559790 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.96■□□□□ 0.95
CDC42BPB-206ENST00000559790 GAS2O43903 313 aaKnown RBP20.96■□□□□ 0.95
CDC42BPB-206ENST00000559790 LILRB3O75022 631 aa20.96■□□□□ 0.95
CDC42BPB-206ENST00000559790 WEE2P0C1S8 567 aa20.96■□□□□ 0.95
CDC42BPB-206ENST00000559790 SKIP12755 728 aa20.96■□□□□ 0.95
CDC42BPB-206ENST00000559790 XBP1P17861 261 aa20.96■□□□□ 0.95
CDC42BPB-206ENST00000559790 SP100P23497 879 aaPredicted RBP20.96■□□□□ 0.95
CDC42BPB-206ENST00000559790 FOSBP53539 338 aa20.96■□□□□ 0.95
CDC42BPB-206ENST00000559790 PTENP60484 403 aa20.96■□□□□ 0.95
CDC42BPB-206ENST00000559790 ANKRD1Q15327 319 aa20.96■□□□□ 0.95
CDC42BPB-206ENST00000559790 PTPN21Q16825 1174 aa20.96■□□□□ 0.95
CDC42BPB-206ENST00000559790 DIS3L2Q8IYB7 885 aaKnown RBP20.96■□□□□ 0.95
CDC42BPB-206ENST00000559790 RNF168Q8IYW5 571 aaPredicted RBP20.96■□□□□ 0.95
CDC42BPB-206ENST00000559790 C12orf76Q8N812 135 aaPredicted RBP20.96■□□□□ 0.95
CDC42BPB-206ENST00000559790 PRSS33Q8NF86 280 aa20.96■□□□□ 0.95
CDC42BPB-206ENST00000559790 CASP10Q92851 521 aa20.96■□□□□ 0.95
CDC42BPB-206ENST00000559790 NAP1L4Q99733 375 aaKnown RBP20.96■□□□□ 0.95
CDC42BPB-206ENST00000559790 RNF39Q9H2S5 420 aa20.96■□□□□ 0.95
CDC42BPB-206ENST00000559790 ADAM7Q9H2U9 754 aa20.96■□□□□ 0.95
CDC42BPB-206ENST00000559790 RSAD1Q9HA92 442 aa20.96■□□□□ 0.95
CDC42BPB-206ENST00000559790 PPP4R2Q9NY27 417 aa20.96■□□□□ 0.95
CDC42BPB-206ENST00000559790 USP34Q70CQ2 3546 aa20.95■□□□□ 0.94
CDC42BPB-206ENST00000559790 POTEMA6NI47 508 aa20.95■□□□□ 0.94
CDC42BPB-206ENST00000559790 F8W810 466 aa20.95■□□□□ 0.94
CDC42BPB-206ENST00000559790 DKC1O60832 514 aaKnown RBP eCLIP20.95■□□□□ 0.94
CDC42BPB-206ENST00000559790 NCLP19338 710 aaKnown RBP20.95■□□□□ 0.94
CDC42BPB-206ENST00000559790 MBTD1Q05BQ5 628 aa20.95■□□□□ 0.94
CDC42BPB-206ENST00000559790 IER5LQ5T953 404 aa20.95■□□□□ 0.94
CDC42BPB-206ENST00000559790 WASF1Q92558 559 aa20.95■□□□□ 0.94
CDC42BPB-206ENST00000559790 MTRQ99707 1265 aa20.95■□□□□ 0.94
CDC42BPB-206ENST00000559790 GBP3Q9H0R5 595 aa20.95■□□□□ 0.94
CDC42BPB-206ENST00000559790 NOTCH4Q99466 2003 aa20.94■□□□□ 0.94
CDC42BPB-206ENST00000559790 A0A087WWV3 80 aa20.94■□□□□ 0.94
CDC42BPB-206ENST00000559790 C2CD4DB7Z1M9 353 aa20.94■□□□□ 0.94
CDC42BPB-206ENST00000559790 CXCL14O95715 111 aa20.94■□□□□ 0.94
CDC42BPB-206ENST00000559790 SPATA31C1P0DKV0 1188 aa20.94■□□□□ 0.94
CDC42BPB-206ENST00000559790 SRGAP2BP0DMP2 458 aa20.94■□□□□ 0.94
CDC42BPB-206ENST00000559790 GLRA2P23416 452 aa20.94■□□□□ 0.94
CDC42BPB-206ENST00000559790 ARL2P36404 184 aa20.94■□□□□ 0.94
CDC42BPB-206ENST00000559790 RARRES1P49788 294 aa20.94■□□□□ 0.94
CDC42BPB-206ENST00000559790 DSC1Q08554 894 aa20.94■□□□□ 0.94
CDC42BPB-206ENST00000559790 CALCRLQ16602 461 aa20.94■□□□□ 0.94
CDC42BPB-206ENST00000559790 TPH2Q8IWU9 490 aa20.94■□□□□ 0.94
CDC42BPB-206ENST00000559790 CPB2Q96IY4 423 aa20.94■□□□□ 0.94
CDC42BPB-206ENST00000559790 KCNH6Q9H252 994 aa20.94■□□□□ 0.94
CDC42BPB-206ENST00000559790 SMOC2Q9H3U7 446 aa20.94■□□□□ 0.94
CDC42BPB-206ENST00000559790 TTC12Q9H892 705 aaPredicted RBP20.94■□□□□ 0.94
CDC42BPB-206ENST00000559790 MIOSQ9NXC5 875 aa20.94■□□□□ 0.94
CDC42BPB-206ENST00000559790 HES2Q9Y543 173 aa20.94■□□□□ 0.94
CDC42BPB-206ENST00000559790 IPPQ9Y573 584 aa20.94■□□□□ 0.94
CDC42BPB-206ENST00000559790 CNTNAP2Q9UHC6 1331 aa20.94■□□□□ 0.94
CDC42BPB-206ENST00000559790 CITO14578 2027 aa20.94■□□□□ 0.94
CDC42BPB-206ENST00000559790 B4GALT5O43286 388 aa20.93■□□□□ 0.94
CDC42BPB-206ENST00000559790 NEMFO60524 1076 aa20.93■□□□□ 0.94
CDC42BPB-206ENST00000559790 SIGLEC14Q08ET2 396 aa20.93■□□□□ 0.94
CDC42BPB-206ENST00000559790 COLGALT2Q8IYK4 626 aa20.93■□□□□ 0.94
CDC42BPB-206ENST00000559790 GSTCDQ8NEC7 633 aa20.93■□□□□ 0.94
CDC42BPB-206ENST00000559790 TCP11Q8WWU5 503 aa20.93■□□□□ 0.94
CDC42BPB-206ENST00000559790 ANKEF1Q9NU02 776 aa20.93■□□□□ 0.94
CDC42BPB-206ENST00000559790 PDGFBP01127 241 aaPredicted RBP20.92■□□□□ 0.94
CDC42BPB-206ENST00000559790 POMCP01189 267 aa20.92■□□□□ 0.94
CDC42BPB-206ENST00000559790 ARF4P18085 180 aaPredicted RBP20.92■□□□□ 0.94
CDC42BPB-206ENST00000559790 NEK4P51957 841 aa20.92■□□□□ 0.94
CDC42BPB-206ENST00000559790 VCPP55072 806 aaKnown RBP20.92■□□□□ 0.94
CDC42BPB-206ENST00000559790 ITIH3Q06033 890 aa20.92■□□□□ 0.94
CDC42BPB-206ENST00000559790 POU5F1BQ06416 359 aa20.92■□□□□ 0.94
CDC42BPB-206ENST00000559790 TPRNQ4KMQ1 711 aa20.92■□□□□ 0.94
CDC42BPB-206ENST00000559790 RARS2Q5T160 578 aaKnown RBP20.92■□□□□ 0.94
CDC42BPB-206ENST00000559790 KIAA1841Q6NSI8 718 aa20.92■□□□□ 0.94
CDC42BPB-206ENST00000559790 EXOC8Q8IYI6 725 aa20.92■□□□□ 0.94
CDC42BPB-206ENST00000559790 PIGOQ8TEQ8 1089 aa20.92■□□□□ 0.94
CDC42BPB-206ENST00000559790 PGBD4Q96DM1 585 aa20.92■□□□□ 0.94
CDC42BPB-206ENST00000559790 ZFP42Q96MM3 310 aa20.92■□□□□ 0.94
CDC42BPB-206ENST00000559790 PHOX2BQ99453 314 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms