RNA–Protein interactions for RNA: ENST00000559642.1

BMP4-208, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-208ENST00000559642 TBC1D13Q9NVG8 400 aa14.27□□□□□ -0.13
BMP4-208ENST00000559642 USP20Q9Y2K6 914 aa14.27□□□□□ -0.13
BMP4-208ENST00000559642 HES2Q9Y543 173 aa14.27□□□□□ -0.13
BMP4-208ENST00000559642 IPPQ9Y573 584 aa14.27□□□□□ -0.13
BMP4-208ENST00000559642 MYO7AQ13402 2215 aa14.27□□□□□ -0.13
BMP4-208ENST00000559642 TCF20Q9UGU0 1960 aaKnown RBP14.27□□□□□ -0.13
BMP4-208ENST00000559642 CNTNAP2Q9UHC6 1331 aa14.26□□□□□ -0.13
BMP4-208ENST00000559642 MYH11P35749 1972 aa14.26□□□□□ -0.13
BMP4-208ENST00000559642 STX6O43752 255 aa14.26□□□□□ -0.13
BMP4-208ENST00000559642 B4GALT3O60512 393 aa14.26□□□□□ -0.13
BMP4-208ENST00000559642 HIP1RO75146 1068 aa14.26□□□□□ -0.13
BMP4-208ENST00000559642 ZC3H11AO75152 810 aaKnown RBP eCLIP14.26□□□□□ -0.13
BMP4-208ENST00000559642 OFD1O75665 1012 aa14.26□□□□□ -0.13
BMP4-208ENST00000559642 NPTXRO95502 500 aa14.26□□□□□ -0.13
BMP4-208ENST00000559642 BMP15O95972 392 aa14.26□□□□□ -0.13
BMP4-208ENST00000559642 EDN1P05305 212 aa14.26□□□□□ -0.13
BMP4-208ENST00000559642 NCLP19338 710 aaKnown RBP14.26□□□□□ -0.13
BMP4-208ENST00000559642 AXLP30530 894 aa14.26□□□□□ -0.13
BMP4-208ENST00000559642 GTF2F1P35269 517 aaKnown RBP eCLIP14.26□□□□□ -0.132e-6■■■□□ 18.3
BMP4-208ENST00000559642 NAMPTP43490 491 aa14.26□□□□□ -0.13
BMP4-208ENST00000559642 AFF1P51825 1210 aaKnown RBP14.26□□□□□ -0.13
BMP4-208ENST00000559642 CEBPZQ03701 1054 aaKnown RBP14.26□□□□□ -0.13
BMP4-208ENST00000559642 RAD51AP2Q09MP3 1159 aa14.26□□□□□ -0.13
BMP4-208ENST00000559642 PTPAQ15257 358 aa14.26□□□□□ -0.13
BMP4-208ENST00000559642 PCBP1Q15365 356 aaKnown RBP eCLIP14.26□□□□□ -0.13
BMP4-208ENST00000559642 NOMO2Q5JPE7 1267 aa14.26□□□□□ -0.13
BMP4-208ENST00000559642 MRPL10Q7Z7H8 261 aaKnown RBP14.26□□□□□ -0.13
BMP4-208ENST00000559642 ADGRD2Q7Z7M1 963 aa14.26□□□□□ -0.13
BMP4-208ENST00000559642 DAW1Q8N136 415 aa14.26□□□□□ -0.13
BMP4-208ENST00000559642 DEPTORQ8TB45 409 aa14.26□□□□□ -0.13
BMP4-208ENST00000559642 LRRC15Q8TF66 581 aa14.26□□□□□ -0.13
BMP4-208ENST00000559642 PGBD4Q96DM1 585 aa14.26□□□□□ -0.13
BMP4-208ENST00000559642 CCDC51Q96ER9 411 aa14.26□□□□□ -0.13
BMP4-208ENST00000559642 CDK5RAP3Q96JB5 506 aa14.26□□□□□ -0.13
BMP4-208ENST00000559642 CCDC113Q9H0I3 377 aa14.26□□□□□ -0.13
BMP4-208ENST00000559642 GBP3Q9H0R5 595 aa14.26□□□□□ -0.13
BMP4-208ENST00000559642 CSRNP2Q9H175 543 aa14.26□□□□□ -0.13
BMP4-208ENST00000559642 C2orf40Q9H1Z8 148 aa14.26□□□□□ -0.13
BMP4-208ENST00000559642 RNF39Q9H2S5 420 aa14.26□□□□□ -0.13
BMP4-208ENST00000559642 NXF3Q9H4D5 531 aaKnown RBP14.26□□□□□ -0.13
BMP4-208ENST00000559642 RSAD1Q9HA92 442 aa14.26□□□□□ -0.13
BMP4-208ENST00000559642 COG5Q9UP83 839 aa14.26□□□□□ -0.13
BMP4-208ENST00000559642 NT5C1B-RDH14C9J2C7 533 aa14.25□□□□□ -0.13
BMP4-208ENST00000559642 PRKCBP05771 671 aa14.25□□□□□ -0.13
BMP4-208ENST00000559642 KCNA5P22460 613 aa14.25□□□□□ -0.13
BMP4-208ENST00000559642 MARCKSP29966 332 aaPredicted RBP14.25□□□□□ -0.13
BMP4-208ENST00000559642 BCAR1P56945 870 aa14.25□□□□□ -0.13
BMP4-208ENST00000559642 HYAL1Q12794 435 aa14.25□□□□□ -0.13
BMP4-208ENST00000559642 MAPK7Q13164 816 aa14.25□□□□□ -0.13
BMP4-208ENST00000559642 PPP2R5AQ15172 486 aa14.25□□□□□ -0.13
BMP4-208ENST00000559642 FOXD4L5Q5VV16 416 aaPredicted RBP14.25□□□□□ -0.13
BMP4-208ENST00000559642 RINT1Q6NUQ1 792 aa14.25□□□□□ -0.13
BMP4-208ENST00000559642 PPP4R3CPQ6ZMV5 832 aa14.25□□□□□ -0.13
BMP4-208ENST00000559642 EP400NLQ6ZTU2 488 aa14.25□□□□□ -0.13
BMP4-208ENST00000559642 C1orf186Q6ZWK4 172 aa14.25□□□□□ -0.13
BMP4-208ENST00000559642 SLC39A11Q8N1S5 342 aa14.25□□□□□ -0.13
BMP4-208ENST00000559642 SPRYD3Q8NCJ5 442 aa14.25□□□□□ -0.13
BMP4-208ENST00000559642 FOXD4L4Q8WXT5 416 aaPredicted RBP14.25□□□□□ -0.13
BMP4-208ENST00000559642 KIFAP3Q92845 792 aa14.25□□□□□ -0.13
BMP4-208ENST00000559642 IFT74Q96LB3 600 aa14.25□□□□□ -0.13
BMP4-208ENST00000559642 AK8Q96MA6 479 aa14.25□□□□□ -0.13
BMP4-208ENST00000559642 TRIM6Q9C030 488 aaPredicted RBP14.25□□□□□ -0.13
BMP4-208ENST00000559642 NT5C3AQ9H0P0 336 aa14.25□□□□□ -0.13
BMP4-208ENST00000559642 FZD8Q9H461 694 aa14.25□□□□□ -0.13
BMP4-208ENST00000559642 PRMT7Q9NVM4 692 aaPredicted RBP14.25□□□□□ -0.13
BMP4-208ENST00000559642 TDRD15B5MCY1 1934 aaKnown RBP14.25□□□□□ -0.13
BMP4-208ENST00000559642 XIRP2A4UGR9 3374 aa14.25□□□□□ -0.13
BMP4-208ENST00000559642 BRWD1Q9NSI6 2320 aa14.24□□□□□ -0.13
BMP4-208ENST00000559642 NPHP3-ACAD11A0A0J9YXS1 232 aa14.24□□□□□ -0.13
BMP4-208ENST00000559642 CCDC169A6NNP5 214 aa14.24□□□□□ -0.13
BMP4-208ENST00000559642 LINC01565O15544 149 aa14.24□□□□□ -0.13
BMP4-208ENST00000559642 POMCP01189 267 aa14.24□□□□□ -0.13
BMP4-208ENST00000559642 HSP90AA1P07900 732 aaKnown RBP14.24□□□□□ -0.13
BMP4-208ENST00000559642 PLA2G4BP0C869 781 aa14.24□□□□□ -0.13
BMP4-208ENST00000559642 ITGA4P13612 1032 aa14.24□□□□□ -0.13
BMP4-208ENST00000559642 LONP1P36776 959 aaKnown RBP14.24□□□□□ -0.13
BMP4-208ENST00000559642 MLH1P40692 756 aa14.24□□□□□ -0.13
BMP4-208ENST00000559642 UBA7P41226 1012 aa14.24□□□□□ -0.13
BMP4-208ENST00000559642 PEX3P56589 373 aa14.24□□□□□ -0.13
BMP4-208ENST00000559642 ERVFC1P60507 584 aa14.24□□□□□ -0.13
BMP4-208ENST00000559642 RNASELQ05823 741 aaKnown RBP14.24□□□□□ -0.13
BMP4-208ENST00000559642 NCBP1Q09161 790 aaKnown RBP14.24□□□□□ -0.13
BMP4-208ENST00000559642 PRPF4BQ13523 1007 aaKnown RBP14.24□□□□□ -0.13
BMP4-208ENST00000559642 KARSQ15046 597 aaKnown RBP14.24□□□□□ -0.13
BMP4-208ENST00000559642 MAPK6Q16659 721 aa14.24□□□□□ -0.13
BMP4-208ENST00000559642 FAM187BQ17R55 369 aa14.24□□□□□ -0.13
BMP4-208ENST00000559642 CSPP1Q1MSJ5 1256 aa14.24□□□□□ -0.13
BMP4-208ENST00000559642 TMEM132AQ24JP5 1023 aa14.24□□□□□ -0.13
BMP4-208ENST00000559642 SPECC1Q5M775 1068 aa14.24□□□□□ -0.13
BMP4-208ENST00000559642 PLPP4Q5VZY2 271 aa14.24□□□□□ -0.13
BMP4-208ENST00000559642 SLC27A1Q6PCB7 646 aa14.24□□□□□ -0.13
BMP4-208ENST00000559642 TMEM173Q86WV6 379 aaPredicted RBP14.24□□□□□ -0.13
BMP4-208ENST00000559642 ZNF280BQ86YH2 543 aa14.24□□□□□ -0.13
BMP4-208ENST00000559642 URGCPQ8TCY9 931 aa14.24□□□□□ -0.13
BMP4-208ENST00000559642 MRPS27Q92552 414 aaKnown RBP14.24□□□□□ -0.13
BMP4-208ENST00000559642 PRIMPOLQ96LW4 560 aa14.24□□□□□ -0.13
BMP4-208ENST00000559642 USP28Q96RU2 1077 aa14.24□□□□□ -0.13
BMP4-208ENST00000559642 PDZD7Q9H5P4 517 aa14.24□□□□□ -0.13
BMP4-208ENST00000559642 IGFLR1Q9H665 355 aa14.24□□□□□ -0.13
BMP4-208ENST00000559642 NRDE2Q9H7Z3 1164 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms