RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 ZNF668Q96K58 619 aaPredicted RBP10.97□□□□□ -0.65
SMAD3-211ENST00000559460 MXRA8Q9BRK3 442 aa10.97□□□□□ -0.65
SMAD3-211ENST00000559460 GCOM2Q9BZD3 368 aaPredicted RBP10.97□□□□□ -0.65
SMAD3-211ENST00000559460 ADAMTS10Q9H324 1103 aa10.97□□□□□ -0.65
SMAD3-211ENST00000559460 HEBP1Q9NRV9 189 aa10.97□□□□□ -0.65
SMAD3-211ENST00000559460 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.97□□□□□ -0.65
SMAD3-211ENST00000559460 KANSL3Q9P2N6 904 aa10.97□□□□□ -0.65
SMAD3-211ENST00000559460 PIN4Q9Y237 131 aaKnown RBP10.97□□□□□ -0.65
SMAD3-211ENST00000559460 CHURC1-FNTBB4DL54 471 aa10.96□□□□□ -0.65
SMAD3-211ENST00000559460 TAF4O00268 1085 aa10.96□□□□□ -0.65
SMAD3-211ENST00000559460 AXIN1O15169 862 aa10.96□□□□□ -0.65
SMAD3-211ENST00000559460 XYLBO75191 536 aa10.96□□□□□ -0.65
SMAD3-211ENST00000559460 ATG7O95352 703 aa10.96□□□□□ -0.65
SMAD3-211ENST00000559460 OR1G1P47890 313 aa10.96□□□□□ -0.65
SMAD3-211ENST00000559460 FNTBP49356 437 aa10.96□□□□□ -0.65
SMAD3-211ENST00000559460 TRDNQ13061 729 aa10.96□□□□□ -0.65
SMAD3-211ENST00000559460 RNF43Q68DV7 783 aa10.96□□□□□ -0.65
SMAD3-211ENST00000559460 SWSAP1Q6NVH7 229 aa10.96□□□□□ -0.65
SMAD3-211ENST00000559460 LONP2Q86WA8 852 aa10.96□□□□□ -0.65
SMAD3-211ENST00000559460 CCDC60Q8IWA6 550 aaPredicted RBP10.96□□□□□ -0.65
SMAD3-211ENST00000559460 FAM160A2Q8N612 972 aaPredicted RBP10.96□□□□□ -0.65
SMAD3-211ENST00000559460 FGF13Q92913 245 aa10.96□□□□□ -0.65
SMAD3-211ENST00000559460 LSM14BQ9BX40 385 aaKnown RBP10.96□□□□□ -0.65
SMAD3-211ENST00000559460 ARRDC1-AS1Q9H2J1 176 aa10.96□□□□□ -0.65
SMAD3-211ENST00000559460 PCDHA6Q9UN73 950 aa10.96□□□□□ -0.65
SMAD3-211ENST00000559460 PRG3Q9Y2Y8 225 aaPredicted RBP10.96□□□□□ -0.65
SMAD3-211ENST00000559460 PCDHA8Q9Y5H6 950 aa10.96□□□□□ -0.65
SMAD3-211ENST00000559460 MYH15Q9Y2K3 1946 aa10.96□□□□□ -0.66
SMAD3-211ENST00000559460 COL4A3Q01955 1670 aa10.95□□□□□ -0.66
SMAD3-211ENST00000559460 IGKV6D-21A0A0A0MT36 114 aa10.95□□□□□ -0.66
SMAD3-211ENST00000559460 NRP1O14786 923 aa10.95□□□□□ -0.66
SMAD3-211ENST00000559460 TM4SF5O14894 197 aa10.95□□□□□ -0.66
SMAD3-211ENST00000559460 TGM5O43548 720 aa10.95□□□□□ -0.66
SMAD3-211ENST00000559460 OFD1O75665 1012 aa10.95□□□□□ -0.66
SMAD3-211ENST00000559460 ZMYND10O75800 440 aa10.95□□□□□ -0.66
SMAD3-211ENST00000559460 C1RP00736 705 aa10.95□□□□□ -0.66
SMAD3-211ENST00000559460 ZNF806P0C7X5 589 aa10.95□□□□□ -0.66
SMAD3-211ENST00000559460 TDGF1P13385 188 aa10.95□□□□□ -0.66
SMAD3-211ENST00000559460 SPINK2P20155 84 aa10.95□□□□□ -0.66
SMAD3-211ENST00000559460 ZNF76P36508 570 aa10.95□□□□□ -0.66
SMAD3-211ENST00000559460 GPC3P51654 580 aa10.95□□□□□ -0.66
SMAD3-211ENST00000559460 SART3Q15020 963 aaKnown RBP10.95□□□□□ -0.66
SMAD3-211ENST00000559460 UBE2SQ16763 222 aa10.95□□□□□ -0.66
SMAD3-211ENST00000559460 PPM1LQ5SGD2 360 aa10.95□□□□□ -0.66
SMAD3-211ENST00000559460 HEATR6Q6AI08 1181 aaKnown RBP10.95□□□□□ -0.66
SMAD3-211ENST00000559460 CATIPQ7Z7H3 387 aa10.95□□□□□ -0.66
SMAD3-211ENST00000559460 TICAM2Q86XR7 235 aa10.95□□□□□ -0.66
SMAD3-211ENST00000559460 ZNF280BQ86YH2 543 aa10.95□□□□□ -0.66
SMAD3-211ENST00000559460 LRRC71Q8N4P6 559 aa10.95□□□□□ -0.66
SMAD3-211ENST00000559460 CTCFLQ8NI51 663 aaPredicted RBP10.95□□□□□ -0.66
SMAD3-211ENST00000559460 OTUD7AQ8TE49 926 aaPredicted RBP10.95□□□□□ -0.66
SMAD3-211ENST00000559460 DNASE1L2Q92874 299 aa10.95□□□□□ -0.66
SMAD3-211ENST00000559460 MAP4K1Q92918 833 aa10.95□□□□□ -0.66
SMAD3-211ENST00000559460 FAM167AQ96KS9 214 aa10.95□□□□□ -0.66
SMAD3-211ENST00000559460 INO80BQ9C086 356 aaPredicted RBP10.95□□□□□ -0.66
SMAD3-211ENST00000559460 FAM105AQ9NUU6 356 aa10.95□□□□□ -0.66
SMAD3-211ENST00000559460 ZBTB42B2RXF5 422 aa10.94□□□□□ -0.66
SMAD3-211ENST00000559460 IFIT3O14879 490 aaKnown RBP10.94□□□□□ -0.66
SMAD3-211ENST00000559460 HRO43593 1189 aa10.94□□□□□ -0.66
SMAD3-211ENST00000559460 HNRNPA1P09651 372 aaKnown RBP eCLIP10.94□□□□□ -0.66
SMAD3-211ENST00000559460 NCLP19338 710 aaKnown RBP10.94□□□□□ -0.66
SMAD3-211ENST00000559460 DSG1Q02413 1049 aa10.94□□□□□ -0.66
SMAD3-211ENST00000559460 SRSF5Q13243 272 aaKnown RBP10.94□□□□□ -0.66
SMAD3-211ENST00000559460 SEC23AQ15436 765 aa10.94□□□□□ -0.66
SMAD3-211ENST00000559460 CCDC6Q16204 474 aa10.94□□□□□ -0.66
SMAD3-211ENST00000559460 SLC35G1Q2M3R5 365 aa10.94□□□□□ -0.66
SMAD3-211ENST00000559460 DAB2IPQ5VWQ8 1189 aa10.94□□□□□ -0.66
SMAD3-211ENST00000559460 ABHD15Q6UXT9 468 aa10.94□□□□□ -0.66
SMAD3-211ENST00000559460 MAMSTRQ6ZN01 415 aa10.94□□□□□ -0.66
SMAD3-211ENST00000559460 FAM3CQ92520 227 aa10.94□□□□□ -0.66
SMAD3-211ENST00000559460 RILPL2Q969X0 211 aa10.94□□□□□ -0.66
SMAD3-211ENST00000559460 TRAIPQ9BWF2 469 aa10.94□□□□□ -0.66
SMAD3-211ENST00000559460 BRD9Q9H8M2 597 aa10.94□□□□□ -0.66
SMAD3-211ENST00000559460 RSAD1Q9HA92 442 aa10.94□□□□□ -0.66
SMAD3-211ENST00000559460 LMAN1LQ9HAT1 526 aa10.94□□□□□ -0.66
SMAD3-211ENST00000559460 RXFP1Q9HBX9 757 aa10.94□□□□□ -0.66
SMAD3-211ENST00000559460 AGO4Q9HCK5 861 aaKnown RBP10.94□□□□□ -0.66
SMAD3-211ENST00000559460 CNTNAP2Q9UHC6 1331 aa10.93□□□□□ -0.66
SMAD3-211ENST00000559460 DDHD2O94830 711 aa10.93□□□□□ -0.66
SMAD3-211ENST00000559460 POMCP01189 267 aa10.93□□□□□ -0.66
SMAD3-211ENST00000559460 PSAPP07602 524 aa10.93□□□□□ -0.66
SMAD3-211ENST00000559460 NTHL1P78549 312 aa10.93□□□□□ -0.66
SMAD3-211ENST00000559460 CDC42EP1Q00587 391 aa10.93□□□□□ -0.66
SMAD3-211ENST00000559460 SATB1Q01826 763 aa10.93□□□□□ -0.66
SMAD3-211ENST00000559460 ITGB3BPQ13352 177 aaPredicted RBP10.93□□□□□ -0.66
SMAD3-211ENST00000559460 LRRC32Q14392 662 aa10.93□□□□□ -0.66
SMAD3-211ENST00000559460 CEP55Q53EZ4 464 aa10.93□□□□□ -0.66
SMAD3-211ENST00000559460 CATSPER4Q7RTX7 472 aa10.93□□□□□ -0.66
SMAD3-211ENST00000559460 LOXL4Q96JB6 756 aa10.93□□□□□ -0.66
SMAD3-211ENST00000559460 SCNM1Q9BWG6 230 aa10.93□□□□□ -0.66
SMAD3-211ENST00000559460 SPZ1Q9BXG8 430 aa10.93□□□□□ -0.66
SMAD3-211ENST00000559460 LY9Q9HBG7 655 aa10.93□□□□□ -0.66
SMAD3-211ENST00000559460 RXFP3Q9NSD7 469 aa10.93□□□□□ -0.66
SMAD3-211ENST00000559460 SAMM50Q9Y512 469 aa10.93□□□□□ -0.66
SMAD3-211ENST00000559460 DOCK8Q8NF50 2099 aa10.93□□□□□ -0.66
SMAD3-211ENST00000559460 MEIS3P2A8K0S8 358 aa10.92□□□□□ -0.66
SMAD3-211ENST00000559460 ECI2O75521 394 aa10.92□□□□□ -0.66
SMAD3-211ENST00000559460 CSDE1O75534 798 aaKnown RBP10.92□□□□□ -0.66
SMAD3-211ENST00000559460 PAPLNO95428 1278 aa10.92□□□□□ -0.66
SMAD3-211ENST00000559460 SEC24BO95487 1268 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms