RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 SYT1P21579 422 aa9.06□□□□□ -0.96
SNX1-207ENST00000559401 HOXA11P31270 313 aaPredicted RBP9.06□□□□□ -0.96
SNX1-207ENST00000559401 GTF2F1P35269 517 aaKnown RBP eCLIP9.06□□□□□ -0.96
SNX1-207ENST00000559401 IRS1P35568 1242 aa9.06□□□□□ -0.96
SNX1-207ENST00000559401 NAMPTP43490 491 aa9.06□□□□□ -0.96
SNX1-207ENST00000559401 NRIP1P48552 1158 aa9.06□□□□□ -0.96
SNX1-207ENST00000559401 ALDH7A1P49419 539 aaKnown RBP9.06□□□□□ -0.96
SNX1-207ENST00000559401 NDUFV1P49821 464 aa9.06□□□□□ -0.96
SNX1-207ENST00000559401 KRT17Q04695 432 aa9.06□□□□□ -0.96
SNX1-207ENST00000559401 UBE3AQ05086 875 aa9.06□□□□□ -0.96
SNX1-207ENST00000559401 POU5F1BQ06416 359 aa9.06□□□□□ -0.96
SNX1-207ENST00000559401 CLUL1Q15846 466 aa9.06□□□□□ -0.96
SNX1-207ENST00000559401 IL17AQ16552 155 aa9.06□□□□□ -0.96
SNX1-207ENST00000559401 NOMO2Q5JPE7 1267 aa9.06□□□□□ -0.96
SNX1-207ENST00000559401 UBXN11Q5T124 520 aa9.06□□□□□ -0.96
SNX1-207ENST00000559401 PLPP4Q5VZY2 271 aa9.06□□□□□ -0.96
SNX1-207ENST00000559401 ARL6IP4Q66PJ3 421 aaKnown RBP9.06□□□□□ -0.96
SNX1-207ENST00000559401 RBM23Q86U06 439 aaKnown RBP9.06□□□□□ -0.96
SNX1-207ENST00000559401 CABP7Q86V35 215 aa9.06□□□□□ -0.96
SNX1-207ENST00000559401 IFNLR1Q8IU57 520 aaPredicted RBP9.06□□□□□ -0.96
SNX1-207ENST00000559401 HACE1Q8IYU2 909 aa9.06□□□□□ -0.96
SNX1-207ENST00000559401 CNNM3Q8NE01 707 aa9.06□□□□□ -0.96
SNX1-207ENST00000559401 BSNDQ8WZ55 320 aa9.06□□□□□ -0.96
SNX1-207ENST00000559401 KIFAP3Q92845 792 aa9.06□□□□□ -0.96
SNX1-207ENST00000559401 CCDC51Q96ER9 411 aa9.06□□□□□ -0.96
SNX1-207ENST00000559401 TMEM169Q96HH4 297 aa9.06□□□□□ -0.96
SNX1-207ENST00000559401 FAM193BQ96PV7 902 aaPredicted RBP9.06□□□□□ -0.96
SNX1-207ENST00000559401 UHRF1Q96T88 793 aaPredicted RBP9.06□□□□□ -0.96
SNX1-207ENST00000559401 TRAIPQ9BWF2 469 aa9.06□□□□□ -0.96
SNX1-207ENST00000559401 EIF2AQ9BY44 585 aaKnown RBP9.06□□□□□ -0.96
SNX1-207ENST00000559401 NT5C3AQ9H0P0 336 aa9.06□□□□□ -0.96
SNX1-207ENST00000559401 CSRNP2Q9H175 543 aa9.06□□□□□ -0.96
SNX1-207ENST00000559401 C2orf40Q9H1Z8 148 aa9.06□□□□□ -0.96
SNX1-207ENST00000559401 TBC1D13Q9NVG8 400 aa9.06□□□□□ -0.96
SNX1-207ENST00000559401 PRMT7Q9NVM4 692 aaPredicted RBP9.06□□□□□ -0.96
SNX1-207ENST00000559401 SPG21Q9NZD8 308 aa9.06□□□□□ -0.96
SNX1-207ENST00000559401 HES2Q9Y543 173 aa9.06□□□□□ -0.96
SNX1-207ENST00000559401 IPPQ9Y573 584 aa9.06□□□□□ -0.96
SNX1-207ENST00000559401 PCDHGC5Q9Y5F6 944 aa9.06□□□□□ -0.96
SNX1-207ENST00000559401 CNTNAP2Q9UHC6 1331 aa9.05□□□□□ -0.96
SNX1-207ENST00000559401 MYO7AQ13402 2215 aa9.05□□□□□ -0.96
SNX1-207ENST00000559401 CCDC169A6NNP5 214 aa9.05□□□□□ -0.96
SNX1-207ENST00000559401 NCK2O43639 380 aa9.05□□□□□ -0.96
SNX1-207ENST00000559401 ZNF623O75123 536 aa9.05□□□□□ -0.96
SNX1-207ENST00000559401 OFD1O75665 1012 aa9.05□□□□□ -0.96
SNX1-207ENST00000559401 POMCP01189 267 aa9.05□□□□□ -0.96
SNX1-207ENST00000559401 PRKCBP05771 671 aa9.05□□□□□ -0.96
SNX1-207ENST00000559401 NCLP19338 710 aaKnown RBP9.05□□□□□ -0.96
SNX1-207ENST00000559401 MLH1P40692 756 aa9.05□□□□□ -0.96
SNX1-207ENST00000559401 UBA7P41226 1012 aa9.05□□□□□ -0.96
SNX1-207ENST00000559401 BCAR1P56945 870 aa9.05□□□□□ -0.96
SNX1-207ENST00000559401 CEBPZQ03701 1054 aaKnown RBP9.05□□□□□ -0.96
SNX1-207ENST00000559401 RAD51AP2Q09MP3 1159 aa9.05□□□□□ -0.96
SNX1-207ENST00000559401 HYAL1Q12794 435 aa9.05□□□□□ -0.96
SNX1-207ENST00000559401 PRPF4BQ13523 1007 aaKnown RBP9.05□□□□□ -0.96
SNX1-207ENST00000559401 CAMK1Q14012 370 aa9.05□□□□□ -0.96
SNX1-207ENST00000559401 SF3A1Q15459 793 aaKnown RBP9.05□□□□□ -0.96
SNX1-207ENST00000559401 MAPK6Q16659 721 aa9.05□□□□□ -0.96
SNX1-207ENST00000559401 AMHR2Q16671 573 aa9.05□□□□□ -0.96
SNX1-207ENST00000559401 SLC27A1Q6PCB7 646 aa9.05□□□□□ -0.96
SNX1-207ENST00000559401 AGMOQ6ZNB7 445 aa9.05□□□□□ -0.96
SNX1-207ENST00000559401 TMC7Q7Z402 723 aa9.05□□□□□ -0.96
SNX1-207ENST00000559401 ADGRD2Q7Z7M1 963 aa9.05□□□□□ -0.96
SNX1-207ENST00000559401 RSPH1Q8WYR4 309 aa9.05□□□□□ -0.96
SNX1-207ENST00000559401 MRPS27Q92552 414 aaKnown RBP9.05□□□□□ -0.96
SNX1-207ENST00000559401 PABPC5Q96DU9 382 aaKnown RBP9.05□□□□□ -0.96
SNX1-207ENST00000559401 CALML4Q96GE6 196 aa9.05□□□□□ -0.96
SNX1-207ENST00000559401 INTS4Q96HW7 963 aaKnown RBP9.05□□□□□ -0.96
SNX1-207ENST00000559401 PRIMPOLQ96LW4 560 aa9.05□□□□□ -0.96
SNX1-207ENST00000559401 DRC1Q96MC2 740 aa9.05□□□□□ -0.96
SNX1-207ENST00000559401 NECAB3Q96P71 396 aaPredicted RBP9.05□□□□□ -0.96
SNX1-207ENST00000559401 TCF25Q9BQ70 676 aa9.05□□□□□ -0.96
SNX1-207ENST00000559401 KIFC3Q9BVG8 833 aa9.05□□□□□ -0.96
SNX1-207ENST00000559401 NFKBIZQ9BYH8 718 aa9.05□□□□□ -0.96
SNX1-207ENST00000559401 NXF3Q9H4D5 531 aaKnown RBP9.05□□□□□ -0.96
SNX1-207ENST00000559401 TLE6Q9H808 572 aa9.05□□□□□ -0.96
SNX1-207ENST00000559401 UBN1Q9NPG3 1134 aa9.05□□□□□ -0.96
SNX1-207ENST00000559401 PARP2Q9UGN5 583 aa9.05□□□□□ -0.96
SNX1-207ENST00000559401 BRWD1Q9NSI6 2320 aa9.05□□□□□ -0.96
SNX1-207ENST00000559401 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.04□□□□□ -0.96
SNX1-207ENST00000559401 N4BP3O15049 544 aa9.04□□□□□ -0.96
SNX1-207ENST00000559401 PER2O15055 1255 aa9.04□□□□□ -0.96
SNX1-207ENST00000559401 LINC01565O15544 149 aa9.04□□□□□ -0.96
SNX1-207ENST00000559401 HIP1RO75146 1068 aa9.04□□□□□ -0.96
SNX1-207ENST00000559401 BMP1P13497 986 aa9.04□□□□□ -0.96
SNX1-207ENST00000559401 AKAP5P24588 427 aa9.04□□□□□ -0.96
SNX1-207ENST00000559401 PEX3P56589 373 aa9.04□□□□□ -0.96
SNX1-207ENST00000559401 ERVFC1P60507 584 aa9.04□□□□□ -0.96
SNX1-207ENST00000559401 PLCB3Q01970 1234 aa9.04□□□□□ -0.96
SNX1-207ENST00000559401 RESTQ13127 1097 aa9.04□□□□□ -0.96
SNX1-207ENST00000559401 DHX8Q14562 1220 aaKnown RBP9.04□□□□□ -0.96
SNX1-207ENST00000559401 BMS1Q14692 1282 aaKnown RBP9.04□□□□□ -0.96
SNX1-207ENST00000559401 LEXMQ3ZCV2 418 aa9.04□□□□□ -0.96
SNX1-207ENST00000559401 CDCA2Q69YH5 1023 aaPredicted RBP9.04□□□□□ -0.96
SNX1-207ENST00000559401 PTCRAQ6ISU1 281 aaPredicted RBP9.04□□□□□ -0.96
SNX1-207ENST00000559401 FAM173BQ6P4H8 233 aa9.04□□□□□ -0.96
SNX1-207ENST00000559401 PPP4R3CPQ6ZMV5 832 aa9.04□□□□□ -0.96
SNX1-207ENST00000559401 KCNK18Q7Z418 384 aa9.04□□□□□ -0.96
SNX1-207ENST00000559401 MRPL10Q7Z7H8 261 aaKnown RBP9.04□□□□□ -0.96
SNX1-207ENST00000559401 SLC39A11Q8N1S5 342 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms