RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 TRIM67Q6ZTA4 783 aa16.65■□□□□ 0.26
LRRC28-213ENST00000559399 PIAS4Q8N2W9 510 aaPredicted RBP16.65■□□□□ 0.26
LRRC28-213ENST00000559399 BCL7CQ8WUZ0 217 aaPredicted RBP16.65■□□□□ 0.26
LRRC28-213ENST00000559399 CCDC43Q96MW1 224 aaKnown RBP16.65■□□□□ 0.26
LRRC28-213ENST00000559399 KCNH6Q9H252 994 aa16.65■□□□□ 0.26
LRRC28-213ENST00000559399 ADAM7Q9H2U9 754 aa16.65■□□□□ 0.26
LRRC28-213ENST00000559399 TTC12Q9H892 705 aaPredicted RBP16.65■□□□□ 0.26
LRRC28-213ENST00000559399 RSAD1Q9HA92 442 aa16.65■□□□□ 0.26
LRRC28-213ENST00000559399 LOXHD1Q8IVV2 1947 aa16.64■□□□□ 0.26
LRRC28-213ENST00000559399 CTSAP10619 480 aa16.64■□□□□ 0.25
LRRC28-213ENST00000559399 SLC11A1P49279 550 aa16.64■□□□□ 0.25
LRRC28-213ENST00000559399 FOSBP53539 338 aa16.64■□□□□ 0.25
LRRC28-213ENST00000559399 ZXDAP98168 799 aa16.64■□□□□ 0.25
LRRC28-213ENST00000559399 ITIH3Q06033 890 aa16.64■□□□□ 0.25
LRRC28-213ENST00000559399 TFDP1Q14186 410 aa16.64■□□□□ 0.25
LRRC28-213ENST00000559399 UBXN11Q5T124 520 aa16.64■□□□□ 0.25
LRRC28-213ENST00000559399 MRPL10Q7Z7H8 261 aaKnown RBP16.64■□□□□ 0.25
LRRC28-213ENST00000559399 NECTIN4Q96NY8 510 aa16.64■□□□□ 0.25
LRRC28-213ENST00000559399 HSD17B14Q9BPX1 270 aa16.64■□□□□ 0.25
LRRC28-213ENST00000559399 XPNPEP1Q9NQW7 623 aa16.64■□□□□ 0.25
LRRC28-213ENST00000559399 ANKEF1Q9NU02 776 aa16.64■□□□□ 0.25
LRRC28-213ENST00000559399 DZANK1Q9NVP4 752 aa16.64■□□□□ 0.25
LRRC28-213ENST00000559399 KANSL3Q9P2N6 904 aa16.64■□□□□ 0.25
LRRC28-213ENST00000559399 DNAJB4Q9UDY4 337 aa16.64■□□□□ 0.25
LRRC28-213ENST00000559399 STK39Q9UEW8 545 aa16.64■□□□□ 0.25
LRRC28-213ENST00000559399 IRAK3Q9Y616 596 aa16.64■□□□□ 0.25
LRRC28-213ENST00000559399 MYH9P35579 1960 aaKnown RBP16.64■□□□□ 0.25
LRRC28-213ENST00000559399 C5orf42Q9H799 3197 aa16.63■□□□□ 0.25
LRRC28-213ENST00000559399 TMEM221A6NGB7 291 aa16.63■□□□□ 0.25
LRRC28-213ENST00000559399 M0R296 226 aa16.63■□□□□ 0.25
LRRC28-213ENST00000559399 B4GALT3O60512 393 aa16.63■□□□□ 0.25
LRRC28-213ENST00000559399 TSPAN1O60635 241 aa16.63■□□□□ 0.25
LRRC28-213ENST00000559399 DGAT1O75907 488 aa16.63■□□□□ 0.25
LRRC28-213ENST00000559399 NCLP19338 710 aaKnown RBP16.63■□□□□ 0.25
LRRC28-213ENST00000559399 TXKP42681 527 aa16.63■□□□□ 0.25
LRRC28-213ENST00000559399 PTENP60484 403 aa16.63■□□□□ 0.25
LRRC28-213ENST00000559399 NCBP1Q09161 790 aaKnown RBP16.63■□□□□ 0.25
LRRC28-213ENST00000559399 BMP8AQ7Z5Y6 402 aa16.63■□□□□ 0.25
LRRC28-213ENST00000559399 ZNF280BQ86YH2 543 aa16.63■□□□□ 0.25
LRRC28-213ENST00000559399 CNNM3Q8NE01 707 aa16.63■□□□□ 0.25
LRRC28-213ENST00000559399 AUTS2Q8WXX7 1259 aa16.63■□□□□ 0.25
LRRC28-213ENST00000559399 CCDC51Q96ER9 411 aa16.63■□□□□ 0.25
LRRC28-213ENST00000559399 TMEM175Q9BSA9 504 aa16.63■□□□□ 0.25
LRRC28-213ENST00000559399 NR2E1Q9Y466 385 aa16.63■□□□□ 0.25
LRRC28-213ENST00000559399 EVPLQ92817 2033 aa16.63■□□□□ 0.25
LRRC28-213ENST00000559399 INO80B-WBP1J3KQ70 363 aa16.62■□□□□ 0.25
LRRC28-213ENST00000559399 WNT7AO00755 349 aa16.62■□□□□ 0.25
LRRC28-213ENST00000559399 SP100P23497 879 aaPredicted RBP16.62■□□□□ 0.25
LRRC28-213ENST00000559399 AXLP30530 894 aa16.62■□□□□ 0.25
LRRC28-213ENST00000559399 RARRES1P49788 294 aa16.62■□□□□ 0.25
LRRC28-213ENST00000559399 AFF1P51825 1210 aaKnown RBP16.62■□□□□ 0.25
LRRC28-213ENST00000559399 PTPN21Q16825 1174 aa16.62■□□□□ 0.25
LRRC28-213ENST00000559399 NOTUMQ6P988 496 aa16.62■□□□□ 0.25
LRRC28-213ENST00000559399 IFNLR1Q8IU57 520 aaPredicted RBP16.62■□□□□ 0.25
LRRC28-213ENST00000559399 FAM193BQ96PV7 902 aaPredicted RBP16.62■□□□□ 0.25
LRRC28-213ENST00000559399 MTMR9Q96QG7 549 aa16.62■□□□□ 0.25
LRRC28-213ENST00000559399 VN1R3Q9BXE9 311 aa16.62■□□□□ 0.25
LRRC28-213ENST00000559399 UBN1Q9NPG3 1134 aa16.62■□□□□ 0.25
LRRC28-213ENST00000559399 TSHZ2Q9NRE2 1034 aa16.62■□□□□ 0.25
LRRC28-213ENST00000559399 CDH22Q9UJ99 828 aa16.62■□□□□ 0.25
LRRC28-213ENST00000559399 IPPQ9Y573 584 aa16.62■□□□□ 0.25
LRRC28-213ENST00000559399 DDHD2O94830 711 aa16.61■□□□□ 0.25
LRRC28-213ENST00000559399 POMCP01189 267 aa16.61■□□□□ 0.25
LRRC28-213ENST00000559399 ITGA4P13612 1032 aa16.61■□□□□ 0.25
LRRC28-213ENST00000559399 MTHFRP42898 656 aa16.61■□□□□ 0.25
LRRC28-213ENST00000559399 POU5F1BQ06416 359 aa16.61■□□□□ 0.25
LRRC28-213ENST00000559399 SIGLEC14Q08ET2 396 aa16.61■□□□□ 0.25
LRRC28-213ENST00000559399 ST3GAL1Q11201 340 aa16.61■□□□□ 0.25
LRRC28-213ENST00000559399 CAPSQ13938 189 aa16.61■□□□□ 0.25
LRRC28-213ENST00000559399 SAFBQ15424 915 aaKnown RBP eCLIP16.61■□□□□ 0.25
LRRC28-213ENST00000559399 PTPN14Q15678 1187 aa16.61■□□□□ 0.25
LRRC28-213ENST00000559399 ZBTB33Q86T24 672 aa16.61■□□□□ 0.25
LRRC28-213ENST00000559399 PPFIBP1Q86W92 1011 aa16.61■□□□□ 0.25
LRRC28-213ENST00000559399 SMG8Q8ND04 991 aaKnown RBP16.61■□□□□ 0.25
LRRC28-213ENST00000559399 ASAP3Q8TDY4 903 aa16.61■□□□□ 0.25
LRRC28-213ENST00000559399 PBXIP1Q96AQ6 731 aa16.61■□□□□ 0.25
LRRC28-213ENST00000559399 FBXL18Q96ME1 805 aa16.61■□□□□ 0.25
LRRC28-213ENST00000559399 RIPOR3Q96MK2 946 aa16.61■□□□□ 0.25
LRRC28-213ENST00000559399 EIF2AQ9BY44 585 aaKnown RBP16.61■□□□□ 0.25
LRRC28-213ENST00000559399 POMKQ9H5K3 350 aa16.61■□□□□ 0.25
LRRC28-213ENST00000559399 POTEMA6NI47 508 aa16.6■□□□□ 0.25
LRRC28-213ENST00000559399 ALDH2P05091 517 aa16.6■□□□□ 0.25
LRRC28-213ENST00000559399 EPCAMP16422 314 aa16.6■□□□□ 0.25
LRRC28-213ENST00000559399 ARL2P36404 184 aa16.6■□□□□ 0.25
LRRC28-213ENST00000559399 MLH1P40692 756 aa16.6■□□□□ 0.25
LRRC28-213ENST00000559399 MBTD1Q05BQ5 628 aa16.6■□□□□ 0.25
LRRC28-213ENST00000559399 RARS2Q5T160 578 aaKnown RBP16.6■□□□□ 0.25
LRRC28-213ENST00000559399 CABP7Q86V35 215 aa16.6■□□□□ 0.25
LRRC28-213ENST00000559399 SUGP1Q8IWZ8 645 aaKnown RBP16.6■□□□□ 0.25
LRRC28-213ENST00000559399 HACE1Q8IYU2 909 aa16.6■□□□□ 0.25
LRRC28-213ENST00000559399 PIGOQ8TEQ8 1089 aa16.6■□□□□ 0.25
LRRC28-213ENST00000559399 SLC22A17Q8WUG5 538 aa16.6■□□□□ 0.25
LRRC28-213ENST00000559399 CPB2Q96IY4 423 aa16.6■□□□□ 0.25
LRRC28-213ENST00000559399 EMILIN2Q9BXX0 1053 aa16.6■□□□□ 0.25
LRRC28-213ENST00000559399 NFKBIZQ9BYH8 718 aa16.6■□□□□ 0.25
LRRC28-213ENST00000559399 TRIM6Q9C030 488 aaPredicted RBP16.6■□□□□ 0.25
LRRC28-213ENST00000559399 CSRNP2Q9H175 543 aa16.6■□□□□ 0.25
LRRC28-213ENST00000559399 FAN1Q9Y2M0 1017 aa16.6■□□□□ 0.25
LRRC28-213ENST00000559399 NRP1O14786 923 aa16.59■□□□□ 0.25
LRRC28-213ENST00000559399 INPPL1O15357 1258 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms