RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 KCNQ1P51787 676 aa13.34□□□□□ -0.27
TPM1-216ENST00000558910 CEBPZQ03701 1054 aaKnown RBP13.34□□□□□ -0.27
TPM1-216ENST00000558910 PTPROQ16827 1216 aa13.34□□□□□ -0.27
TPM1-216ENST00000558910 TMEM132AQ24JP5 1023 aa13.34□□□□□ -0.27
TPM1-216ENST00000558910 DTHD1Q6ZMT9 781 aa13.34□□□□□ -0.27
TPM1-216ENST00000558910 ZNF410Q86VK4 478 aa13.34□□□□□ -0.27
TPM1-216ENST00000558910 CMTR2Q8IYT2 770 aaKnown RBP13.34□□□□□ -0.27
TPM1-216ENST00000558910 MICAL1Q8TDZ2 1067 aa13.34□□□□□ -0.27
TPM1-216ENST00000558910 SAMD11Q96NU1 681 aa13.34□□□□□ -0.27
TPM1-216ENST00000558910 NACC1Q96RE7 527 aa13.34□□□□□ -0.27
TPM1-216ENST00000558910 IFT122Q9HBG6 1241 aa13.34□□□□□ -0.27
TPM1-216ENST00000558910 TUFT1Q9NNX1 390 aa13.34□□□□□ -0.27
TPM1-216ENST00000558910 ANKEF1Q9NU02 776 aa13.34□□□□□ -0.27
TPM1-216ENST00000558910 DDX19AQ9NUU7 478 aaKnown RBP13.34□□□□□ -0.27
TPM1-216ENST00000558910 RNF19AQ9NV58 838 aa13.34□□□□□ -0.27
TPM1-216ENST00000558910 TMEM161AQ9NX61 479 aa13.34□□□□□ -0.27
TPM1-216ENST00000558910 USP20Q9Y2K6 914 aa13.34□□□□□ -0.27
TPM1-216ENST00000558910 XIRP2A4UGR9 3374 aa13.34□□□□□ -0.27
TPM1-216ENST00000558910 MEIS3P2A8K0S8 358 aa13.33□□□□□ -0.28
TPM1-216ENST00000558910 NT5C1B-RDH14C9J2C7 533 aa13.33□□□□□ -0.28
TPM1-216ENST00000558910 E9PMD0 336 aa13.33□□□□□ -0.28
TPM1-216ENST00000558910 DGAT1O75907 488 aa13.33□□□□□ -0.28
TPM1-216ENST00000558910 ERLIN2O94905 339 aa13.33□□□□□ -0.28
TPM1-216ENST00000558910 GLRA2P23416 452 aa13.33□□□□□ -0.28
TPM1-216ENST00000558910 PHKA2P46019 1235 aa13.33□□□□□ -0.28
TPM1-216ENST00000558910 CDC42EP1Q00587 391 aa13.33□□□□□ -0.28
TPM1-216ENST00000558910 RAD51AP2Q09MP3 1159 aa13.33□□□□□ -0.28
TPM1-216ENST00000558910 CAPSQ13938 189 aa13.33□□□□□ -0.28
TPM1-216ENST00000558910 CLUL1Q15846 466 aa13.33□□□□□ -0.28
TPM1-216ENST00000558910 TCEAL5Q5H9L2 206 aa13.33□□□□□ -0.28
TPM1-216ENST00000558910 HAUS3Q68CZ6 603 aa13.33□□□□□ -0.28
TPM1-216ENST00000558910 FAM173BQ6P4H8 233 aa13.33□□□□□ -0.28
TPM1-216ENST00000558910 RBM23Q86U06 439 aaKnown RBP13.33□□□□□ -0.28
TPM1-216ENST00000558910 EXOC8Q8IYI6 725 aa13.33□□□□□ -0.28
TPM1-216ENST00000558910 THNSL1Q8IYQ7 743 aa13.33□□□□□ -0.28
TPM1-216ENST00000558910 MRPL38Q96DV4 380 aaKnown RBP13.33□□□□□ -0.28
TPM1-216ENST00000558910 C11orf84Q9BUA3 381 aaPredicted RBP13.33□□□□□ -0.28
TPM1-216ENST00000558910 POLR3CQ9BUI4 534 aaPredicted RBP13.33□□□□□ -0.28
TPM1-216ENST00000558910 COL25A1Q9BXS0 654 aaPredicted RBP13.33□□□□□ -0.28
TPM1-216ENST00000558910 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.33□□□□□ -0.28
TPM1-216ENST00000558910 LYPLA2O95372 231 aa13.32□□□□□ -0.28
TPM1-216ENST00000558910 ITGB1P05556 798 aa13.32□□□□□ -0.28
TPM1-216ENST00000558910 LINC00271P0C7V0 271 aa13.32□□□□□ -0.28
TPM1-216ENST00000558910 DNAJB1P25685 340 aa13.32□□□□□ -0.28
TPM1-216ENST00000558910 RPA1P27694 616 aa13.32□□□□□ -0.28
TPM1-216ENST00000558910 GTF2F1P35269 517 aaKnown RBP eCLIP13.32□□□□□ -0.28
TPM1-216ENST00000558910 IRS1P35568 1242 aa13.32□□□□□ -0.28
TPM1-216ENST00000558910 ORC2Q13416 577 aaPredicted RBP13.32□□□□□ -0.28
TPM1-216ENST00000558910 TFDP1Q14186 410 aa13.32□□□□□ -0.28
TPM1-216ENST00000558910 DHX8Q14562 1220 aaKnown RBP13.32□□□□□ -0.28
TPM1-216ENST00000558910 FOXD4L6Q3SYB3 417 aaPredicted RBP13.32□□□□□ -0.28
TPM1-216ENST00000558910 RILPL1Q5EBL4 403 aa13.32□□□□□ -0.28
TPM1-216ENST00000558910 CLLU1OSQ5K130 101 aa13.32□□□□□ -0.28
TPM1-216ENST00000558910 KRT79Q5XKE5 535 aa13.32□□□□□ -0.28
TPM1-216ENST00000558910 FOXD4L3Q6VB84 417 aaPredicted RBP13.32□□□□□ -0.28
TPM1-216ENST00000558910 CRIPAKQ8N1N5 446 aa13.32□□□□□ -0.28
TPM1-216ENST00000558910 POF1BQ8WVV4 589 aa13.32□□□□□ -0.28
TPM1-216ENST00000558910 HLA-CQ95604 372 aa13.32□□□□□ -0.28
TPM1-216ENST00000558910 NECAB3Q96P71 396 aaPredicted RBP13.32□□□□□ -0.28
TPM1-216ENST00000558910 CASD1Q96PB1 797 aa13.32□□□□□ -0.28
TPM1-216ENST00000558910 KIFC3Q9BVG8 833 aa13.32□□□□□ -0.28
TPM1-216ENST00000558910 BHMT2Q9H2M3 363 aa13.32□□□□□ -0.28
TPM1-216ENST00000558910 DACT1Q9NYF0 836 aa13.32□□□□□ -0.28
TPM1-216ENST00000558910 RWDD3Q9Y3V2 267 aa13.32□□□□□ -0.28
TPM1-216ENST00000558910 PCDHB12Q9Y5F1 795 aa13.32□□□□□ -0.28
TPM1-216ENST00000558910 A0A0U1RQF3 1178 aa13.31□□□□□ -0.28
TPM1-216ENST00000558910 H3BQ06 376 aaPredicted RBP13.31□□□□□ -0.28
TPM1-216ENST00000558910 K7ELQ4 463 aaPredicted RBP13.31□□□□□ -0.28
TPM1-216ENST00000558910 B4GALT5O43286 388 aa13.31□□□□□ -0.28
TPM1-216ENST00000558910 HSP90AA1P07900 732 aaKnown RBP13.31□□□□□ -0.28
TPM1-216ENST00000558910 ATF7P17544 494 aaPredicted RBP13.31□□□□□ -0.28
TPM1-216ENST00000558910 KCNA5P22460 613 aa13.31□□□□□ -0.28
TPM1-216ENST00000558910 ARL2P36404 184 aa13.31□□□□□ -0.28
TPM1-216ENST00000558910 FAM189BP81408 668 aa13.31□□□□□ -0.28
TPM1-216ENST00000558910 MRPS5P82675 430 aaKnown RBP13.31□□□□□ -0.28
TPM1-216ENST00000558910 CUL4AQ13619 759 aa13.31□□□□□ -0.28
TPM1-216ENST00000558910 LRRC55Q6ZSA7 311 aa13.31□□□□□ -0.28
TPM1-216ENST00000558910 SRGAP1Q7Z6B7 1085 aa13.31□□□□□ -0.28
TPM1-216ENST00000558910 GPIHBP1Q8IV16 184 aa13.31□□□□□ -0.28
TPM1-216ENST00000558910 COLGALT1Q8NBJ5 622 aa13.31□□□□□ -0.28
TPM1-216ENST00000558910 BSNDQ8WZ55 320 aa13.31□□□□□ -0.28
TPM1-216ENST00000558910 CLP1Q92989 425 aaKnown RBP13.31□□□□□ -0.28
TPM1-216ENST00000558910 EIF2AQ9BY44 585 aaKnown RBP13.31□□□□□ -0.28
TPM1-216ENST00000558910 RAB34Q9BZG1 259 aa13.31□□□□□ -0.28
TPM1-216ENST00000558910 TMEM117Q9H0C3 514 aa13.31□□□□□ -0.28
TPM1-216ENST00000558910 AGPAT5Q9NUQ2 364 aa13.31□□□□□ -0.28
TPM1-216ENST00000558910 FAM105AQ9NUU6 356 aa13.31□□□□□ -0.28
TPM1-216ENST00000558910 CLDND1Q9NY35 253 aa13.31□□□□□ -0.28
TPM1-216ENST00000558910 PLAGL2Q9UPG8 496 aa13.31□□□□□ -0.28
TPM1-216ENST00000558910 HES2Q9Y543 173 aa13.31□□□□□ -0.28
TPM1-216ENST00000558910 PPME1Q9Y570 386 aa13.31□□□□□ -0.28
TPM1-216ENST00000558910 PCDHB2Q9Y5E7 798 aa13.31□□□□□ -0.28
TPM1-216ENST00000558910 NLRC5Q86WI3 1866 aa13.3□□□□□ -0.28
TPM1-216ENST00000558910 RCCD1A6NED2 376 aa13.3□□□□□ -0.28
TPM1-216ENST00000558910 ASAP2O43150 1006 aa13.3□□□□□ -0.28
TPM1-216ENST00000558910 GAS2O43903 313 aaKnown RBP13.3□□□□□ -0.28
TPM1-216ENST00000558910 ZC3H11AO75152 810 aaKnown RBP eCLIP13.3□□□□□ -0.28
TPM1-216ENST00000558910 NPTXRO95502 500 aa13.3□□□□□ -0.28
TPM1-216ENST00000558910 RB1P06400 928 aa13.3□□□□□ -0.28
TPM1-216ENST00000558910 POU3F3P20264 500 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms