RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 F2P00734 622 aa7.42□□□□□ -1.22
LRRC28-209ENST00000558861 PDE6BP35913 854 aa7.42□□□□□ -1.22
LRRC28-209ENST00000558861 CDKN1CP49918 316 aaPredicted RBP7.42□□□□□ -1.22
LRRC28-209ENST00000558861 RRP1P56182 461 aaKnown RBP7.42□□□□□ -1.22
LRRC28-209ENST00000558861 DSG1Q02413 1049 aa7.42□□□□□ -1.22
LRRC28-209ENST00000558861 DHCR24Q15392 516 aa7.42□□□□□ -1.22
LRRC28-209ENST00000558861 EMC4Q5J8M3 183 aa7.42□□□□□ -1.22
LRRC28-209ENST00000558861 PAQR3Q6TCH7 311 aa7.42□□□□□ -1.22
LRRC28-209ENST00000558861 SLC4A10Q6U841 1118 aa7.42□□□□□ -1.22
LRRC28-209ENST00000558861 NBPF11Q86T75 865 aa7.42□□□□□ -1.22
LRRC28-209ENST00000558861 ZSWIM9Q86XI8 627 aa7.42□□□□□ -1.22
LRRC28-209ENST00000558861 DDX42Q86XP3 938 aaKnown RBP eCLIP7.42□□□□□ -1.22
LRRC28-209ENST00000558861 RPUSD2Q8IZ73 545 aaKnown RBP7.42□□□□□ -1.22
LRRC28-209ENST00000558861 Q8N3U1 123 aa7.42□□□□□ -1.22
LRRC28-209ENST00000558861 TTLL11Q8NHH1 800 aa7.42□□□□□ -1.22
LRRC28-209ENST00000558861 UHMK1Q8TAS1 419 aaKnown RBP7.42□□□□□ -1.22
LRRC28-209ENST00000558861 FRAT1Q92837 279 aaPredicted RBP7.42□□□□□ -1.22
LRRC28-209ENST00000558861 SUCLG2Q96I99 432 aa7.42□□□□□ -1.22
LRRC28-209ENST00000558861 MEIS3Q99687 375 aa7.42□□□□□ -1.22
LRRC28-209ENST00000558861 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.42□□□□□ -1.22
LRRC28-209ENST00000558861 B4GALT6Q9UBX8 382 aa7.42□□□□□ -1.22
LRRC28-209ENST00000558861 PALD1Q9ULE6 856 aa7.42□□□□□ -1.22
LRRC28-209ENST00000558861 SRPK3Q9UPE1 567 aa7.42□□□□□ -1.22
LRRC28-209ENST00000558861 ATP8A1Q9Y2Q0 1164 aa7.42□□□□□ -1.22
LRRC28-209ENST00000558861 HGSO14964 777 aaPredicted RBP7.41□□□□□ -1.22
LRRC28-209ENST00000558861 SLC27A2O14975 620 aa7.41□□□□□ -1.22
LRRC28-209ENST00000558861 MPOP05164 745 aa7.41□□□□□ -1.22
LRRC28-209ENST00000558861 GLI1P08151 1106 aa7.41□□□□□ -1.22
LRRC28-209ENST00000558861 NPR1P16066 1061 aa7.41□□□□□ -1.22
LRRC28-209ENST00000558861 YBX3P16989 372 aaKnown RBP eCLIP7.41□□□□□ -1.22
LRRC28-209ENST00000558861 CTSWP56202 376 aa7.41□□□□□ -1.22
LRRC28-209ENST00000558861 ANAPC15P60006 121 aa7.41□□□□□ -1.22
LRRC28-209ENST00000558861 IGBP1P78318 339 aa7.41□□□□□ -1.22
LRRC28-209ENST00000558861 RAB3GAP1Q15042 981 aa7.41□□□□□ -1.22
LRRC28-209ENST00000558861 KCNMB1Q16558 191 aa7.41□□□□□ -1.22
LRRC28-209ENST00000558861 PLEKHN1Q494U1 663 aaPredicted RBP7.41□□□□□ -1.22
LRRC28-209ENST00000558861 KIF18BQ86Y91 864 aa7.41□□□□□ -1.22
LRRC28-209ENST00000558861 C2CD5Q86YS7 1000 aa7.41□□□□□ -1.22
LRRC28-209ENST00000558861 ANKRD13AQ8IZ07 590 aa7.41□□□□□ -1.22
LRRC28-209ENST00000558861 OR2W6PQ8NHA6 318 aa7.41□□□□□ -1.22
LRRC28-209ENST00000558861 SEC14L1Q92503 715 aa7.41□□□□□ -1.22
LRRC28-209ENST00000558861 MASTLQ96GX5 879 aa7.41□□□□□ -1.22
LRRC28-209ENST00000558861 CRAMP1Q96RY5 1269 aa7.41□□□□□ -1.22
LRRC28-209ENST00000558861 AP5M1Q9H0R1 490 aa7.41□□□□□ -1.22
LRRC28-209ENST00000558861 SLC6A17Q9H1V8 727 aa7.41□□□□□ -1.22
LRRC28-209ENST00000558861 MYOTQ9UBF9 498 aa7.41□□□□□ -1.22
LRRC28-209ENST00000558861 TELO2Q9Y4R8 837 aa7.41□□□□□ -1.22
LRRC28-209ENST00000558861 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.4□□□□□ -1.22
LRRC28-209ENST00000558861 H0YIN7 160 aa7.4□□□□□ -1.22
LRRC28-209ENST00000558861 TADA3O75528 432 aa7.4□□□□□ -1.22
LRRC28-209ENST00000558861 KRT37O76014 449 aa7.4□□□□□ -1.22
LRRC28-209ENST00000558861 EYA4O95677 639 aa7.4□□□□□ -1.22
LRRC28-209ENST00000558861 LTFP02788 710 aa7.4□□□□□ -1.22
LRRC28-209ENST00000558861 ATP2A2P16615 1042 aaKnown RBP7.4□□□□□ -1.22
LRRC28-209ENST00000558861 ITGB5P18084 799 aa7.4□□□□□ -1.22
LRRC28-209ENST00000558861 ID4P47928 161 aa7.4□□□□□ -1.22
LRRC28-209ENST00000558861 RFX5P48382 616 aaPredicted RBP7.4□□□□□ -1.22
LRRC28-209ENST00000558861 SCNN1BP51168 640 aa7.4□□□□□ -1.22
LRRC28-209ENST00000558861 MTX1Q13505 466 aa7.4□□□□□ -1.22
LRRC28-209ENST00000558861 MVPQ14764 893 aaKnown RBP7.4□□□□□ -1.22
LRRC28-209ENST00000558861 HHIPL2Q6UWX4 724 aa7.4□□□□□ -1.22
LRRC28-209ENST00000558861 LHFPL2Q6ZUX7 228 aa7.4□□□□□ -1.22
LRRC28-209ENST00000558861 OTOP1Q7RTM1 612 aa7.4□□□□□ -1.22
LRRC28-209ENST00000558861 MILR1Q7Z6M3 343 aa7.4□□□□□ -1.22
LRRC28-209ENST00000558861 NOSTRINQ8IVI9 506 aa7.4□□□□□ -1.22
LRRC28-209ENST00000558861 PRPF38AQ8NAV1 312 aaKnown RBP7.4□□□□□ -1.22
LRRC28-209ENST00000558861 SMC1BQ8NDV3 1235 aa7.4□□□□□ -1.22
LRRC28-209ENST00000558861 CELF1Q92879 486 aaKnown RBP7.4□□□□□ -1.22
LRRC28-209ENST00000558861 USP7Q93009 1102 aa7.4□□□□□ -1.22
LRRC28-209ENST00000558861 PEX11GQ96HA9 241 aa7.4□□□□□ -1.22
LRRC28-209ENST00000558861 BICC1Q9H694 974 aaKnown RBP7.4□□□□□ -1.22
LRRC28-209ENST00000558861 BCAS3Q9H6U6 928 aa7.4□□□□□ -1.22
LRRC28-209ENST00000558861 GREM2Q9H772 168 aa7.4□□□□□ -1.22
LRRC28-209ENST00000558861 THG1LQ9NWX6 298 aaKnown RBP7.4□□□□□ -1.22
LRRC28-209ENST00000558861 H2AFY2Q9P0M6 372 aaPredicted RBP7.4□□□□□ -1.22
LRRC28-209ENST00000558861 MCM8Q9UJA3 840 aa7.4□□□□□ -1.22
LRRC28-209ENST00000558861 DBR1Q9UK59 544 aaKnown RBP7.4□□□□□ -1.22
LRRC28-209ENST00000558861 NUDT5Q9UKK9 219 aa7.4□□□□□ -1.22
LRRC28-209ENST00000558861 PCDHB4Q9Y5E5 795 aa7.4□□□□□ -1.22
LRRC28-209ENST00000558861 SLX4Q8IY92 1834 aa7.39□□□□□ -1.23
LRRC28-209ENST00000558861 OR14I1A6ND48 311 aa7.39□□□□□ -1.23
LRRC28-209ENST00000558861 BIN1O00499 593 aa7.39□□□□□ -1.23
LRRC28-209ENST00000558861 NEMP1O14524 444 aa7.39□□□□□ -1.23
LRRC28-209ENST00000558861 GAS7O60861 476 aa7.39□□□□□ -1.23
LRRC28-209ENST00000558861 BPIP17213 487 aa7.39□□□□□ -1.23
LRRC28-209ENST00000558861 ADCYAP1R1P41586 468 aa7.39□□□□□ -1.23
LRRC28-209ENST00000558861 PRELPP51888 382 aa7.39□□□□□ -1.23
LRRC28-209ENST00000558861 PRR5P85299 388 aa7.39□□□□□ -1.23
LRRC28-209ENST00000558861 IRF9Q00978 393 aa7.39□□□□□ -1.23
LRRC28-209ENST00000558861 FIGNQ5HY92 759 aa7.39□□□□□ -1.23
LRRC28-209ENST00000558861 CPZQ66K79 652 aa7.39□□□□□ -1.23
LRRC28-209ENST00000558861 CREB3L3Q68CJ9 461 aa7.39□□□□□ -1.23
LRRC28-209ENST00000558861 KCTD1Q719H9 257 aa7.39□□□□□ -1.23
LRRC28-209ENST00000558861 TTLL6Q8N841 843 aa7.39□□□□□ -1.23
LRRC28-209ENST00000558861 ATL2Q8NHH9 583 aa7.39□□□□□ -1.23
LRRC28-209ENST00000558861 CHTF18Q8WVB6 975 aa7.39□□□□□ -1.23
LRRC28-209ENST00000558861 GPR101Q96P66 508 aaPredicted RBP7.39□□□□□ -1.23
LRRC28-209ENST00000558861 BOCQ9BWV1 1114 aa7.39□□□□□ -1.23
LRRC28-209ENST00000558861 SMOC1Q9H4F8 434 aa7.39□□□□□ -1.23
LRRC28-209ENST00000558861 ZBTB40Q9NUA8 1239 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms