RNA–Protein interactions for RNA: ENST00000558534.5

RABGGTA-205, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-205ENST00000558534 EPC2Q52LR7 807 aa17.42■□□□□ 0.38
RABGGTA-205ENST00000558534 SLC27A1Q6PCB7 646 aa17.42■□□□□ 0.38
RABGGTA-205ENST00000558534 GPBP1Q86WP2 473 aa17.42■□□□□ 0.38
RABGGTA-205ENST00000558534 RNF169Q8NCN4 708 aa17.42■□□□□ 0.38
RABGGTA-205ENST00000558534 URGCPQ8TCY9 931 aa17.42■□□□□ 0.38
RABGGTA-205ENST00000558534 P2RX5Q93086 422 aa17.42■□□□□ 0.38
RABGGTA-205ENST00000558534 CUEDC2Q9H467 287 aa17.42■□□□□ 0.38
RABGGTA-205ENST00000558534 TMEM134Q9H6X4 195 aa17.42■□□□□ 0.38
RABGGTA-205ENST00000558534 MINDY3Q9H8M7 445 aa17.42■□□□□ 0.38
RABGGTA-205ENST00000558534 KMT5AQ9NQR1 393 aa17.42■□□□□ 0.38
RABGGTA-205ENST00000558534 FAM13BQ9NYF5 915 aa17.42■□□□□ 0.38
RABGGTA-205ENST00000558534 KANSL3Q9P2N6 904 aa17.42■□□□□ 0.38
RABGGTA-205ENST00000558534 CHD9Q3L8U1 2897 aa17.42■□□□□ 0.38
RABGGTA-205ENST00000558534 COL4A4P53420 1690 aaPredicted RBP17.42■□□□□ 0.38
RABGGTA-205ENST00000558534 ACKR2O00590 384 aa17.41■□□□□ 0.38
RABGGTA-205ENST00000558534 PRKCBP05771 671 aa17.41■□□□□ 0.38
RABGGTA-205ENST00000558534 PLS3P13797 630 aa17.41■□□□□ 0.38
RABGGTA-205ENST00000558534 IGFBP4P22692 258 aa17.41■□□□□ 0.38
RABGGTA-205ENST00000558534 PPM1AP35813 382 aa17.41■□□□□ 0.38
RABGGTA-205ENST00000558534 BMPR1AP36894 532 aa17.41■□□□□ 0.38
RABGGTA-205ENST00000558534 STAT6P42226 847 aa17.41■□□□□ 0.38
RABGGTA-205ENST00000558534 ME1P48163 572 aa17.41■□□□□ 0.38
RABGGTA-205ENST00000558534 PEX3P56589 373 aa17.41■□□□□ 0.38
RABGGTA-205ENST00000558534 STRN3Q13033 797 aa17.41■□□□□ 0.38
RABGGTA-205ENST00000558534 FOXD4L5Q5VV16 416 aaPredicted RBP17.41■□□□□ 0.38
RABGGTA-205ENST00000558534 SV2BQ7L1I2 683 aa17.41■□□□□ 0.38
RABGGTA-205ENST00000558534 KCNK18Q7Z418 384 aa17.41■□□□□ 0.38
RABGGTA-205ENST00000558534 SPIRE2Q8WWL2 714 aa17.41■□□□□ 0.38
RABGGTA-205ENST00000558534 FOXD4L4Q8WXT5 416 aaPredicted RBP17.41■□□□□ 0.38
RABGGTA-205ENST00000558534 PLIN2Q99541 437 aa17.41■□□□□ 0.38
RABGGTA-205ENST00000558534 RUSC1Q9BVN2 902 aa17.41■□□□□ 0.38
RABGGTA-205ENST00000558534 SCAND2PQ9GZW5 306 aaPredicted RBP17.41■□□□□ 0.38
RABGGTA-205ENST00000558534 FZD8Q9H461 694 aa17.41■□□□□ 0.38
RABGGTA-205ENST00000558534 STK39Q9UEW8 545 aa17.41■□□□□ 0.38
RABGGTA-205ENST00000558534 PCDHB2Q9Y5E7 798 aa17.41■□□□□ 0.38
RABGGTA-205ENST00000558534 KIAA1671Q9BY89 1806 aa17.4■□□□□ 0.38
RABGGTA-205ENST00000558534 A0A1B0GUA9 196 aa17.4■□□□□ 0.38
RABGGTA-205ENST00000558534 H3BNC9 293 aa17.4■□□□□ 0.38
RABGGTA-205ENST00000558534 FAM13AO94988 1023 aa17.4■□□□□ 0.38
RABGGTA-205ENST00000558534 ITGA4P13612 1032 aa17.4■□□□□ 0.38
RABGGTA-205ENST00000558534 NCLP19338 710 aaKnown RBP17.4■□□□□ 0.38
RABGGTA-205ENST00000558534 HOXA11P31270 313 aaPredicted RBP17.4■□□□□ 0.38
RABGGTA-205ENST00000558534 AMPD3Q01432 767 aa17.4■□□□□ 0.38
RABGGTA-205ENST00000558534 GPM6BQ13491 265 aa17.4■□□□□ 0.38
RABGGTA-205ENST00000558534 DCAF4L1Q3SXM0 396 aa17.4■□□□□ 0.38
RABGGTA-205ENST00000558534 PAN2Q504Q3 1202 aaKnown RBP17.4■□□□□ 0.38
RABGGTA-205ENST00000558534 MRPL10Q7Z7H8 261 aaKnown RBP17.4■□□□□ 0.38
RABGGTA-205ENST00000558534 ZNF598Q86UK7 904 aaKnown RBP17.4■□□□□ 0.38
RABGGTA-205ENST00000558534 MAFAQ8NHW3 353 aaPredicted RBP17.4■□□□□ 0.38
RABGGTA-205ENST00000558534 PPP2R3CQ969Q6 453 aa17.4■□□□□ 0.38
RABGGTA-205ENST00000558534 EPSTI1Q96J88 318 aa17.4■□□□□ 0.38
RABGGTA-205ENST00000558534 NTPCRQ9BSD7 190 aaKnown RBP17.4■□□□□ 0.38
RABGGTA-205ENST00000558534 CERS4Q9HA82 394 aa17.4■□□□□ 0.38
RABGGTA-205ENST00000558534 MAGEF1Q9HAY2 307 aa17.4■□□□□ 0.38
RABGGTA-205ENST00000558534 PARVGQ9HBI0 331 aa17.4■□□□□ 0.38
RABGGTA-205ENST00000558534 TFIP11Q9UBB9 837 aaKnown RBP17.4■□□□□ 0.38
RABGGTA-205ENST00000558534 MTUS1Q9ULD2 1270 aa17.4■□□□□ 0.38
RABGGTA-205ENST00000558534 TRANK1O15050 2925 aa17.4■□□□□ 0.38
RABGGTA-205ENST00000558534 CDH23Q9H251 3354 aa17.39■□□□□ 0.37
RABGGTA-205ENST00000558534 ARF4P18085 180 aaPredicted RBP17.39■□□□□ 0.37
RABGGTA-205ENST00000558534 ANP32AP39687 249 aaKnown RBP17.39■□□□□ 0.37
RABGGTA-205ENST00000558534 NPTX2P47972 431 aa17.39■□□□□ 0.37
RABGGTA-205ENST00000558534 UBE3AQ05086 875 aa17.39■□□□□ 0.37
RABGGTA-205ENST00000558534 GRIN1Q05586 938 aa17.39■□□□□ 0.37
RABGGTA-205ENST00000558534 TIGD5Q53EQ6 642 aa17.39■□□□□ 0.37
RABGGTA-205ENST00000558534 CLIC6Q96NY7 704 aa17.39■□□□□ 0.37
RABGGTA-205ENST00000558534 C17orf80Q9BSJ5 609 aa17.39■□□□□ 0.37
RABGGTA-205ENST00000558534 MRPL4Q9BYD3 311 aaKnown RBP17.39■□□□□ 0.37
RABGGTA-205ENST00000558534 RSAD1Q9HA92 442 aa17.39■□□□□ 0.37
RABGGTA-205ENST00000558534 MRPL42Q9Y6G3 142 aaKnown RBP17.39■□□□□ 0.37
RABGGTA-205ENST00000558534 FGFR1P11362 822 aa17.38■□□□□ 0.37
RABGGTA-205ENST00000558534 DNM1Q05193 864 aaKnown RBP17.38■□□□□ 0.37
RABGGTA-205ENST00000558534 RNASELQ05823 741 aaKnown RBP17.38■□□□□ 0.37
RABGGTA-205ENST00000558534 DHX8Q14562 1220 aaKnown RBP17.38■□□□□ 0.37
RABGGTA-205ENST00000558534 BMS1Q14692 1282 aaKnown RBP17.38■□□□□ 0.37
RABGGTA-205ENST00000558534 AMHR2Q16671 573 aa17.38■□□□□ 0.37
RABGGTA-205ENST00000558534 SPECC1Q5M775 1068 aa17.38■□□□□ 0.37
RABGGTA-205ENST00000558534 IQUBQ8NA54 791 aa17.38■□□□□ 0.37
RABGGTA-205ENST00000558534 HELQQ8TDG4 1101 aa17.38■□□□□ 0.37
RABGGTA-205ENST00000558534 SPATA32Q96LK8 384 aa17.38■□□□□ 0.37
RABGGTA-205ENST00000558534 CASD1Q96PB1 797 aa17.38■□□□□ 0.37
RABGGTA-205ENST00000558534 FAM193BQ96PV7 902 aaPredicted RBP17.38■□□□□ 0.37
RABGGTA-205ENST00000558534 CCDC113Q9H0I3 377 aa17.38■□□□□ 0.37
RABGGTA-205ENST00000558534 BLOC1S4Q9NUP1 217 aa17.38■□□□□ 0.37
RABGGTA-205ENST00000558534 ARHGAP28Q9P2N2 729 aa17.38■□□□□ 0.37
RABGGTA-205ENST00000558534 SEL1LQ9UBV2 794 aa17.38■□□□□ 0.37
RABGGTA-205ENST00000558534 RCOR1Q9UKL0 485 aa17.38■□□□□ 0.37
RABGGTA-205ENST00000558534 GIT1Q9Y2X7 761 aa17.38■□□□□ 0.37
RABGGTA-205ENST00000558534 TDRD15B5MCY1 1934 aaKnown RBP17.37■□□□□ 0.37
RABGGTA-205ENST00000558534 FSD2A1L4K1 749 aa17.37■□□□□ 0.37
RABGGTA-205ENST00000558534 NR1I2O75469 434 aa17.37■□□□□ 0.37
RABGGTA-205ENST00000558534 GAP43P17677 238 aa17.37■□□□□ 0.37
RABGGTA-205ENST00000558534 KRT17Q04695 432 aa17.37■□□□□ 0.37
RABGGTA-205ENST00000558534 MCM6Q14566 821 aa17.37■□□□□ 0.37
RABGGTA-205ENST00000558534 FOXD4L6Q3SYB3 417 aaPredicted RBP17.37■□□□□ 0.37
RABGGTA-205ENST00000558534 NOMO2Q5JPE7 1267 aa17.37■□□□□ 0.37
RABGGTA-205ENST00000558534 FOXD4L3Q6VB84 417 aaPredicted RBP17.37■□□□□ 0.37
RABGGTA-205ENST00000558534 DAW1Q8N136 415 aa17.37■□□□□ 0.37
RABGGTA-205ENST00000558534 MYCT1Q8N699 235 aa17.37■□□□□ 0.37
RABGGTA-205ENST00000558534 GDPD5Q8WTR4 605 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms