RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 FGFR4P22455 802 aa11.39□□□□□ -0.59
TPM1-212ENST00000558347 EIF4BP23588 611 aaKnown RBP11.39□□□□□ -0.59
TPM1-212ENST00000558347 LONP1P36776 959 aaKnown RBP11.39□□□□□ -0.59
TPM1-212ENST00000558347 NPEPPSP55786 919 aa11.39□□□□□ -0.59
TPM1-212ENST00000558347 EPHA7Q15375 998 aa11.39□□□□□ -0.59
TPM1-212ENST00000558347 ODR4Q5SWX8 454 aa11.39□□□□□ -0.59
TPM1-212ENST00000558347 FAM102BQ5T8I3 360 aa11.39□□□□□ -0.59
TPM1-212ENST00000558347 SLC24A5Q71RS6 500 aa11.39□□□□□ -0.59
TPM1-212ENST00000558347 SLFN12Q8IYM2 578 aa11.39□□□□□ -0.59
TPM1-212ENST00000558347 ZNF710Q8N1W2 664 aa11.39□□□□□ -0.59
TPM1-212ENST00000558347 HLA-CQ95604 372 aa11.39□□□□□ -0.59
TPM1-212ENST00000558347 DYDC2Q96IM9 177 aa11.39□□□□□ -0.59
TPM1-212ENST00000558347 LXNQ9BS40 222 aa11.39□□□□□ -0.59
TPM1-212ENST00000558347 C1orf112Q9NSG2 853 aa11.39□□□□□ -0.59
TPM1-212ENST00000558347 RGL1Q9NZL6 768 aa11.39□□□□□ -0.59
TPM1-212ENST00000558347 LRFN2Q9ULH4 789 aa11.39□□□□□ -0.59
TPM1-212ENST00000558347 COG5Q9UP83 839 aa11.39□□□□□ -0.59
TPM1-212ENST00000558347 PCDHB7Q9Y5E2 793 aa11.39□□□□□ -0.59
TPM1-212ENST00000558347 ARID2Q68CP9 1835 aa11.38□□□□□ -0.59
TPM1-212ENST00000558347 TTC28Q96AY4 2481 aa11.38□□□□□ -0.59
TPM1-212ENST00000558347 GRM6O15303 877 aa11.38□□□□□ -0.59
TPM1-212ENST00000558347 NRDCO43847 1150 aa11.38□□□□□ -0.59
TPM1-212ENST00000558347 RB1P06400 928 aa11.38□□□□□ -0.59
TPM1-212ENST00000558347 BMP1P13497 986 aa11.38□□□□□ -0.59
TPM1-212ENST00000558347 DARSP14868 501 aaKnown RBP11.38□□□□□ -0.59
TPM1-212ENST00000558347 CYP4A11Q02928 519 aa11.38□□□□□ -0.59
TPM1-212ENST00000558347 GRIN1Q05586 938 aa11.38□□□□□ -0.59
TPM1-212ENST00000558347 CTTNQ14247 550 aaKnown RBP11.38□□□□□ -0.59
TPM1-212ENST00000558347 IL17AQ16552 155 aa11.38□□□□□ -0.59
TPM1-212ENST00000558347 PTPROQ16827 1216 aa11.38□□□□□ -0.59
TPM1-212ENST00000558347 TPD52L1Q16890 204 aaPredicted RBP11.38□□□□□ -0.59
TPM1-212ENST00000558347 DTHD1Q6ZMT9 781 aa11.38□□□□□ -0.59
TPM1-212ENST00000558347 FAM43BQ6ZT52 329 aaPredicted RBP11.38□□□□□ -0.59
TPM1-212ENST00000558347 ADAMTS19Q8TE59 1207 aa11.38□□□□□ -0.59
TPM1-212ENST00000558347 NLRP7Q8WX94 980 aa11.38□□□□□ -0.59
TPM1-212ENST00000558347 SCLT1Q96NL6 688 aa11.38□□□□□ -0.59
TPM1-212ENST00000558347 CSRNP2Q9H175 543 aa11.38□□□□□ -0.59
TPM1-212ENST00000558347 CYP26B1Q9NR63 512 aa11.38□□□□□ -0.59
TPM1-212ENST00000558347 RWDD3Q9Y3V2 267 aa11.38□□□□□ -0.59
TPM1-212ENST00000558347 A0A087WZ62 844 aa11.37□□□□□ -0.59
TPM1-212ENST00000558347 VWA3AA6NCI4 1184 aa11.37□□□□□ -0.59
TPM1-212ENST00000558347 ZBTB39O15060 712 aa11.37□□□□□ -0.59
TPM1-212ENST00000558347 CBFA2T2O43439 604 aa11.37□□□□□ -0.59
TPM1-212ENST00000558347 SLITRK3O94933 977 aa11.37□□□□□ -0.59
TPM1-212ENST00000558347 FGFR1P11362 822 aa11.37□□□□□ -0.59
TPM1-212ENST00000558347 SYKP43405 635 aa11.37□□□□□ -0.59
TPM1-212ENST00000558347 FXR2P51116 673 aaKnown RBP eCLIP11.37□□□□□ -0.59
TPM1-212ENST00000558347 FAM189BP81408 668 aa11.37□□□□□ -0.59
TPM1-212ENST00000558347 CCZ1BP86790 482 aa11.37□□□□□ -0.59
TPM1-212ENST00000558347 CCZ1P86791 482 aaPredicted RBP11.37□□□□□ -0.59
TPM1-212ENST00000558347 CALCRLQ16602 461 aa11.37□□□□□ -0.59
TPM1-212ENST00000558347 RHPN2Q8IUC4 686 aa11.37□□□□□ -0.59
TPM1-212ENST00000558347 KSR1Q8IVT5 923 aa11.37□□□□□ -0.59
TPM1-212ENST00000558347 C4orf19Q8IY42 314 aa11.37□□□□□ -0.59
TPM1-212ENST00000558347 CEP170P1Q96L14 293 aa11.37□□□□□ -0.59
TPM1-212ENST00000558347 AK8Q96MA6 479 aa11.37□□□□□ -0.59
TPM1-212ENST00000558347 FDXACB1Q9BRP7 624 aaPredicted RBP11.37□□□□□ -0.59
TPM1-212ENST00000558347 C11orf84Q9BUA3 381 aaPredicted RBP11.37□□□□□ -0.59
TPM1-212ENST00000558347 ALG13Q9NP73 1137 aaKnown RBP11.37□□□□□ -0.59
TPM1-212ENST00000558347 BMP2KQ9NSY1 1161 aaPredicted RBP11.37□□□□□ -0.59
TPM1-212ENST00000558347 SUCLA2Q9P2R7 463 aaPredicted RBP11.37□□□□□ -0.59
TPM1-212ENST00000558347 HCSTQ9UBK5 93 aa11.37□□□□□ -0.59
TPM1-212ENST00000558347 HOOK1Q9UJC3 728 aaKnown RBP11.37□□□□□ -0.59
TPM1-212ENST00000558347 BRWD1Q9NSI6 2320 aa11.37□□□□□ -0.59
TPM1-212ENST00000558347 PLXNA4Q9HCM2 1894 aa11.36□□□□□ -0.59
TPM1-212ENST00000558347 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.36□□□□□ -0.59
TPM1-212ENST00000558347 TBKBP1A7MCY6 615 aa11.36□□□□□ -0.59
TPM1-212ENST00000558347 DKC1O60832 514 aaKnown RBP eCLIP11.36□□□□□ -0.59
TPM1-212ENST00000558347 CSPG5O95196 566 aa11.36□□□□□ -0.59
TPM1-212ENST00000558347 SKILP12757 684 aa11.36□□□□□ -0.59
TPM1-212ENST00000558347 YWHABP31946 246 aaKnown RBP11.36□□□□□ -0.59
TPM1-212ENST00000558347 TXKP42681 527 aa11.36□□□□□ -0.59
TPM1-212ENST00000558347 DNM2P50570 870 aa11.36□□□□□ -0.59
TPM1-212ENST00000558347 CAMK1Q14012 370 aa11.36□□□□□ -0.59
TPM1-212ENST00000558347 PDIA5Q14554 519 aa11.36□□□□□ -0.59
TPM1-212ENST00000558347 AAK1Q2M2I8 961 aa11.36□□□□□ -0.59
TPM1-212ENST00000558347 DPCR1Q3MIW9 517 aa11.36□□□□□ -0.59
TPM1-212ENST00000558347 TIGD5Q53EQ6 642 aa11.36□□□□□ -0.59
TPM1-212ENST00000558347 TCEAL5Q5H9L2 206 aa11.36□□□□□ -0.59
TPM1-212ENST00000558347 CEP135Q66GS9 1140 aa11.36□□□□□ -0.59
TPM1-212ENST00000558347 NYAP1Q6ZVC0 841 aa11.36□□□□□ -0.59
TPM1-212ENST00000558347 IGSF22Q8N9C0 903 aa11.36□□□□□ -0.59
TPM1-212ENST00000558347 P2RX5Q93086 422 aa11.36□□□□□ -0.59
TPM1-212ENST00000558347 EIF2AK1Q9BQI3 630 aaKnown RBP11.36□□□□□ -0.59
TPM1-212ENST00000558347 PLVAPQ9BX97 442 aa11.36□□□□□ -0.59
TPM1-212ENST00000558347 GCOM2Q9BZD3 368 aaPredicted RBP11.36□□□□□ -0.59
TPM1-212ENST00000558347 DHX33Q9H6R0 707 aaKnown RBP11.36□□□□□ -0.59
TPM1-212ENST00000558347 ELAC1Q9H777 363 aaKnown RBP11.36□□□□□ -0.59
TPM1-212ENST00000558347 UBE2ZQ9H832 354 aaPredicted RBP11.36□□□□□ -0.59
TPM1-212ENST00000558347 RNF19AQ9NV58 838 aa11.36□□□□□ -0.59
TPM1-212ENST00000558347 TMEM161AQ9NX61 479 aa11.36□□□□□ -0.59
TPM1-212ENST00000558347 KCNH3Q9ULD8 1083 aa11.36□□□□□ -0.59
TPM1-212ENST00000558347 PCDHA12Q9UN75 941 aa11.36□□□□□ -0.59
TPM1-212ENST00000558347 BDP1A6H8Y1 2624 aa11.35□□□□□ -0.59
TPM1-212ENST00000558347 POTEMA6NI47 508 aa11.35□□□□□ -0.59
TPM1-212ENST00000558347 CCP110O43303 1012 aa11.35□□□□□ -0.59
TPM1-212ENST00000558347 ITGB1P05556 798 aa11.35□□□□□ -0.59
TPM1-212ENST00000558347 ZSCAN20P17040 1043 aaPredicted RBP11.35□□□□□ -0.59
TPM1-212ENST00000558347 DNAJB1P25685 340 aa11.35□□□□□ -0.59
TPM1-212ENST00000558347 NCAPHQ15003 741 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms