RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 SNX2O60749 519 aa14.83□□□□□ -0.04
SPG11-210ENST00000558319 MMP1P03956 469 aa14.83□□□□□ -0.04
SPG11-210ENST00000558319 FGFR4P22455 802 aa14.83□□□□□ -0.04
SPG11-210ENST00000558319 GALNT17Q6IS24 598 aa14.83□□□□□ -0.04
SPG11-210ENST00000558319 SH3KBP1Q96B97 665 aa14.83□□□□□ -0.04
SPG11-210ENST00000558319 DDX47Q9H0S4 455 aaKnown RBP14.83□□□□□ -0.04
SPG11-210ENST00000558319 PCDHA6Q9UN73 950 aa14.83□□□□□ -0.04
SPG11-210ENST00000558319 PCDHA8Q9Y5H6 950 aa14.83□□□□□ -0.04
SPG11-210ENST00000558319 ARL4CP56559 192 aa14.82□□□□□ -0.04
SPG11-210ENST00000558319 ELMOD1Q8N336 334 aa14.82□□□□□ -0.04
SPG11-210ENST00000558319 PPHLN1Q8NEY8 458 aaKnown RBP14.82□□□□□ -0.04
SPG11-210ENST00000558319 NEDD4P46934 1319 aa14.82□□□□□ -0.04
SPG11-210ENST00000558319 GOLGA8RI6L899 631 aa14.82□□□□□ -0.04
SPG11-210ENST00000558319 TJP3O95049 919 aa14.82□□□□□ -0.04
SPG11-210ENST00000558319 CRKP46108 304 aa14.82□□□□□ -0.04
SPG11-210ENST00000558319 MTM1Q13496 603 aa14.82□□□□□ -0.04
SPG11-210ENST00000558319 ZMYM1Q5SVZ6 1142 aa14.82□□□□□ -0.04
SPG11-210ENST00000558319 FASTKD5Q7L8L6 764 aaKnown RBP14.82□□□□□ -0.04
SPG11-210ENST00000558319 SSH3Q8TE77 659 aa14.82□□□□□ -0.04
SPG11-210ENST00000558319 ATP6V1G3Q96LB4 118 aa14.82□□□□□ -0.04
SPG11-210ENST00000558319 SH3GL2Q99962 352 aa14.82□□□□□ -0.04
SPG11-210ENST00000558319 MAGEF1Q9HAY2 307 aa14.82□□□□□ -0.04
SPG11-210ENST00000558319 CFAP73A6NFT4 308 aa14.82□□□□□ -0.04
SPG11-210ENST00000558319 SEMA3EO15041 775 aa14.82□□□□□ -0.04
SPG11-210ENST00000558319 NLRP11P59045 1033 aaKnown RBP14.82□□□□□ -0.04
SPG11-210ENST00000558319 CCDC144BQ3MJ40 725 aa14.82□□□□□ -0.04
SPG11-210ENST00000558319 SH2D3CQ8N5H7 860 aa14.82□□□□□ -0.04
SPG11-210ENST00000558319 PI4KBQ9UBF8 816 aa14.82□□□□□ -0.04
SPG11-210ENST00000558319 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.82□□□□□ -0.04
SPG11-210ENST00000558319 RASGRF1Q13972 1273 aa14.82□□□□□ -0.04
SPG11-210ENST00000558319 GALNT4Q8N4A0 578 aa14.82□□□□□ -0.04
SPG11-210ENST00000558319 OSBPL9Q96SU4 736 aa14.82□□□□□ -0.04
SPG11-210ENST00000558319 CUEDC2Q9H467 287 aa14.82□□□□□ -0.04
SPG11-210ENST00000558319 ABCC10Q5T3U5 1492 aa14.82□□□□□ -0.04
SPG11-210ENST00000558319 ATP8B3O60423 1300 aa14.82□□□□□ -0.04
SPG11-210ENST00000558319 M0QYV0 167 aa14.82□□□□□ -0.04
SPG11-210ENST00000558319 RPS6P62753 249 aaKnown RBP14.82□□□□□ -0.04
SPG11-210ENST00000558319 COBLL1Q53SF7 1204 aa14.82□□□□□ -0.04
SPG11-210ENST00000558319 KANSL2Q9H9L4 492 aa14.82□□□□□ -0.04
SPG11-210ENST00000558319 PP2D1A8MPX8 630 aa14.81□□□□□ -0.04
SPG11-210ENST00000558319 THEMIS2Q5TEJ8 643 aa14.81□□□□□ -0.04
SPG11-210ENST00000558319 CASS4Q9NQ75 786 aa14.81□□□□□ -0.04
SPG11-210ENST00000558319 ECE2O60344 883 aa14.81□□□□□ -0.04
SPG11-210ENST00000558319 DDX42Q86XP3 938 aaKnown RBP eCLIP14.81□□□□□ -0.04
SPG11-210ENST00000558319 INPP5DQ92835 1189 aa14.81□□□□□ -0.04
SPG11-210ENST00000558319 PBXIP1Q96AQ6 731 aa14.81□□□□□ -0.04
SPG11-210ENST00000558319 RMDN3Q96TC7 470 aa14.81□□□□□ -0.04
SPG11-210ENST00000558319 CDV3Q9UKY7 258 aaKnown RBP14.81□□□□□ -0.04
SPG11-210ENST00000558319 DMC1Q14565 340 aa14.81□□□□□ -0.04
SPG11-210ENST00000558319 PGBD3Q8N328 593 aa14.81□□□□□ -0.04
SPG11-210ENST00000558319 C2orf69Q8N8R5 385 aa14.81□□□□□ -0.04
SPG11-210ENST00000558319 ZNF473Q8WTR7 871 aaKnown RBP14.81□□□□□ -0.04
SPG11-210ENST00000558319 CYGBQ8WWM9 190 aa14.81□□□□□ -0.04
SPG11-210ENST00000558319 LZICQ8WZA0 190 aa14.81□□□□□ -0.04
SPG11-210ENST00000558319 EGFL8Q99944 293 aa14.81□□□□□ -0.04
SPG11-210ENST00000558319 LEMD3Q9Y2U8 911 aa14.81□□□□□ -0.04
SPG11-210ENST00000558319 SERPINB3P29508 390 aa14.81□□□□□ -0.04
SPG11-210ENST00000558319 PRDX5P30044 214 aa14.81□□□□□ -0.04
SPG11-210ENST00000558319 PLD3Q8IV08 490 aa14.81□□□□□ -0.04
SPG11-210ENST00000558319 OXER1Q8TDS5 423 aa14.81□□□□□ -0.04
SPG11-210ENST00000558319 PIGBQ92521 554 aa14.81□□□□□ -0.04
SPG11-210ENST00000558319 MXD3Q9BW11 206 aa14.81□□□□□ -0.04
SPG11-210ENST00000558319 E5RI56 91 aa14.81□□□□□ -0.04
SPG11-210ENST00000558319 PRR29P0C7W0 189 aa14.81□□□□□ -0.04
SPG11-210ENST00000558319 CPB1P15086 417 aa14.81□□□□□ -0.04
SPG11-210ENST00000558319 RABGAP1LQ5R372 815 aa14.81□□□□□ -0.04
SPG11-210ENST00000558319 THEM5Q8N1Q8 247 aa14.81□□□□□ -0.04
SPG11-210ENST00000558319 USP33Q8TEY7 942 aa14.81□□□□□ -0.04
SPG11-210ENST00000558319 MAP4K1Q92918 833 aa14.81□□□□□ -0.04
SPG11-210ENST00000558319 RNPEPQ9H4A4 650 aa14.81□□□□□ -0.04
SPG11-210ENST00000558319 SH2B2O14492 632 aaPredicted RBP14.8□□□□□ -0.04
SPG11-210ENST00000558319 GAP43P17677 238 aa14.8□□□□□ -0.04
SPG11-210ENST00000558319 RESTQ13127 1097 aa14.8□□□□□ -0.04
SPG11-210ENST00000558319 GPATCH4Q5T3I0 446 aaKnown RBP14.8□□□□□ -0.04
SPG11-210ENST00000558319 ANKRD40Q6AI12 368 aa14.8□□□□□ -0.04
SPG11-210ENST00000558319 PDXDC1Q6P996 788 aa14.8□□□□□ -0.04
SPG11-210ENST00000558319 NLRP10Q86W26 655 aa14.8□□□□□ -0.04
SPG11-210ENST00000558319 FLAD1Q8NFF5 587 aa14.8□□□□□ -0.04
SPG11-210ENST00000558319 OR9Q1Q8NGQ5 310 aa14.8□□□□□ -0.04
SPG11-210ENST00000558319 FAM217BQ9NTX9 383 aaPredicted RBP14.8□□□□□ -0.04
SPG11-210ENST00000558319 FAM135BQ49AJ0 1406 aa14.8□□□□□ -0.04
SPG11-210ENST00000558319 ZNF185O15231 689 aa14.8□□□□□ -0.04
SPG11-210ENST00000558319 NCAPHQ15003 741 aa14.8□□□□□ -0.04
SPG11-210ENST00000558319 HIF1AQ16665 826 aa14.8□□□□□ -0.04
SPG11-210ENST00000558319 ZNF699Q32M78 642 aa14.8□□□□□ -0.04
SPG11-210ENST00000558319 DEPDC1Q5TB30 811 aa14.8□□□□□ -0.04
SPG11-210ENST00000558319 RCOR1Q9UKL0 485 aa14.8□□□□□ -0.04
SPG11-210ENST00000558319 PRR23AA6NEV1 266 aa14.8□□□□□ -0.04
SPG11-210ENST00000558319 NBPF26B4DH59 902 aa14.8□□□□□ -0.04
SPG11-210ENST00000558319 XPO1O14980 1071 aaKnown RBP14.8□□□□□ -0.04
SPG11-210ENST00000558319 CCNE1P24864 410 aa14.8□□□□□ -0.04
SPG11-210ENST00000558319 TEDDM1Q5T9Z0 273 aa14.8□□□□□ -0.04
SPG11-210ENST00000558319 ZBED8Q8IZ13 594 aa14.8□□□□□ -0.04
SPG11-210ENST00000558319 KIF2BQ8N4N8 673 aa14.8□□□□□ -0.04
SPG11-210ENST00000558319 NBPF15Q8N660 670 aa14.8□□□□□ -0.04
SPG11-210ENST00000558319 FAM95CA0A1B0GW59 222 aa14.8□□□□□ -0.04
SPG11-210ENST00000558319 KPNA7A9QM74 516 aa14.8□□□□□ -0.04
SPG11-210ENST00000558319 H0YC42 278 aa14.8□□□□□ -0.04
SPG11-210ENST00000558319 FOSP01100 380 aaPredicted RBP14.8□□□□□ -0.04
SPG11-210ENST00000558319 HOXB7P09629 217 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms