RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 DNAJC12Q9UKB3 198 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 HPCAL4Q9UM19 191 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 TFR2Q9UP52 801 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 ZHX2Q9Y6X8 837 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 KIF13BQ9NQT8 1826 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 NCANO14594 1321 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 ANKRD62A6NC57 917 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 GOLGA6BA6NDN3 693 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 MIF4GDA9UHW6 222 aaKnown RBP9.02□□□□□ -0.97
SPG11-209ENST00000558253 K7ENM7 598 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 PGRMC1O00264 195 aaKnown RBP9.02□□□□□ -0.97
SPG11-209ENST00000558253 HSF2BPO75031 334 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 ZC3H11AO75152 810 aaKnown RBP eCLIP9.02□□□□□ -0.97
SPG11-209ENST00000558253 ACTN1P12814 892 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 ALAS1P13196 640 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 POLD1P28340 1107 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 YWHABP31946 246 aaKnown RBP9.02□□□□□ -0.97
SPG11-209ENST00000558253 CASP4P49662 377 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 VAMP7P51809 220 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 NCKAP1LP55160 1127 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 ARID5AQ03989 594 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 C2orf54Q08AI8 447 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 MAPK7Q13164 816 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 DRAP1Q14919 205 aaPredicted RBP9.02□□□□□ -0.97
SPG11-209ENST00000558253 PGM5Q15124 567 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 MUM1L1Q5H9M0 696 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 ARHGEF16Q5VV41 709 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 PPP1R2P3Q6NXS1 205 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 LEKR1Q6ZMV7 388 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 PEX26Q7Z412 305 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 MAATS1Q7Z4T9 603 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 VSIG10LQ86VR7 867 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 CCDC125Q86Z20 511 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 APOBEC3FQ8IUX4 373 aaKnown RBP9.02□□□□□ -0.97
SPG11-209ENST00000558253 SCYL3Q8IZE3 742 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 RASGEF1CQ8N431 466 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 ANKRD13CQ8N6S4 541 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 USP38Q8NB14 1042 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 MCPH1Q8NEM0 835 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 TPCN2Q8NHX9 752 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 CCDC26Q8TAB7 109 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 NSUN6Q8TEA1 469 aaKnown RBP9.02□□□□□ -0.97
SPG11-209ENST00000558253 SCFD2Q8WU76 684 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 CTNNBL1Q8WYA6 563 aaPredicted RBP9.02□□□□□ -0.97
SPG11-209ENST00000558253 RFFLQ8WZ73 363 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 DHX38Q92620 1227 aaKnown RBP9.02□□□□□ -0.97
SPG11-209ENST00000558253 INPP4AQ96PE3 977 aaPredicted RBP9.02□□□□□ -0.97
SPG11-209ENST00000558253 RMDN3Q96TC7 470 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.02□□□□□ -0.97
SPG11-209ENST00000558253 LRRC1Q9BTT6 524 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 SLITRK6Q9H5Y7 841 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 PXMP2Q9NR77 195 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 PICK1Q9NRD5 415 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 SALL4Q9UJQ4 1053 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 ADAMTS5Q9UNA0 930 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 SAMM50Q9Y512 469 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 PPME1Q9Y570 386 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 PCDHA10Q9Y5I2 948 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 NFASCO94856 1347 aa9.02□□□□□ -0.97
SPG11-209ENST00000558253 LRRIQ3A6PVS8 624 aaPredicted RBP9.01□□□□□ -0.97
SPG11-209ENST00000558253 SFI1A8K8P3 1242 aa9.01□□□□□ -0.97
SPG11-209ENST00000558253 H3BQF6 201 aa9.01□□□□□ -0.97
SPG11-209ENST00000558253 VWA5AO00534 786 aa9.01□□□□□ -0.97
SPG11-209ENST00000558253 BUB1O43683 1085 aa9.01□□□□□ -0.97
SPG11-209ENST00000558253 PSAPP07602 524 aa9.01□□□□□ -0.97
SPG11-209ENST00000558253 GZMAP12544 262 aa9.01□□□□□ -0.97
SPG11-209ENST00000558253 GBP1P32455 592 aa9.01□□□□□ -0.97
SPG11-209ENST00000558253 CYP2J2P51589 502 aa9.01□□□□□ -0.97
SPG11-209ENST00000558253 MFAP3P55082 362 aa9.01□□□□□ -0.97
SPG11-209ENST00000558253 BACE1P56817 501 aa9.01□□□□□ -0.97
SPG11-209ENST00000558253 RPS6P62753 249 aaKnown RBP9.01□□□□□ -0.97
SPG11-209ENST00000558253 MRPS9P82933 396 aaKnown RBP9.01□□□□□ -0.97
SPG11-209ENST00000558253 ZYXQ15942 572 aaKnown RBP9.01□□□□□ -0.97
SPG11-209ENST00000558253 NBPF9Q3BBW0 867 aa9.01□□□□□ -0.97
SPG11-209ENST00000558253 ZC2HC1CQ53FD0 456 aaPredicted RBP9.01□□□□□ -0.97
SPG11-209ENST00000558253 SPDYCQ5MJ68 293 aa9.01□□□□□ -0.97
SPG11-209ENST00000558253 HAUS6Q7Z4H7 955 aa9.01□□□□□ -0.97
SPG11-209ENST00000558253 CD302Q8IX05 232 aa9.01□□□□□ -0.97
SPG11-209ENST00000558253 EFCAB13Q8IY85 973 aa9.01□□□□□ -0.97
SPG11-209ENST00000558253 ZNF280CQ8ND82 737 aa9.01□□□□□ -0.97
SPG11-209ENST00000558253 BANK1Q8NDB2 785 aa9.01□□□□□ -0.97
SPG11-209ENST00000558253 RUNDC3BQ96NL0 473 aa9.01□□□□□ -0.97
SPG11-209ENST00000558253 TRERF1Q96PN7 1200 aa9.01□□□□□ -0.97
SPG11-209ENST00000558253 UIMC1Q96RL1 719 aa9.01□□□□□ -0.97
SPG11-209ENST00000558253 RUFY1Q96T51 708 aa9.01□□□□□ -0.97
SPG11-209ENST00000558253 PDCD2LQ9BRP1 358 aa9.01□□□□□ -0.97
SPG11-209ENST00000558253 SYT11Q9BT88 431 aa9.01□□□□□ -0.97
SPG11-209ENST00000558253 MOV10L1Q9BXT6 1211 aaKnown RBP9.01□□□□□ -0.97
SPG11-209ENST00000558253 FBXO28Q9NVF7 368 aa9.01□□□□□ -0.97
SPG11-209ENST00000558253 HOXC10Q9NYD6 342 aa9.01□□□□□ -0.97
SPG11-209ENST00000558253 VPS18Q9P253 973 aa9.01□□□□□ -0.97
SPG11-209ENST00000558253 AMFRQ9UKV5 643 aa9.01□□□□□ -0.97
SPG11-209ENST00000558253 STXBP5LQ9Y2K9 1186 aa9.01□□□□□ -0.97
SPG11-209ENST00000558253 GOLGA6L10A0A0M3HER8 536 aa9□□□□□ -0.97
SPG11-209ENST00000558253 DDX3XO00571 662 aaKnown RBP eCLIP9□□□□□ -0.97
SPG11-209ENST00000558253 NFIBO00712 420 aa9□□□□□ -0.97
SPG11-209ENST00000558253 KCNK3O14649 394 aa9□□□□□ -0.97
SPG11-209ENST00000558253 MTA2O94776 668 aa9□□□□□ -0.97
SPG11-209ENST00000558253 ERLIN2O94905 339 aa9□□□□□ -0.97
SPG11-209ENST00000558253 GGPS1O95749 300 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms