RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 K7ENM7 598 aa9.9□□□□□ -0.82
SPG11-207ENST00000558138 K7ERI5 159 aa9.9□□□□□ -0.82
SPG11-207ENST00000558138 TULP1O00294 542 aaPredicted RBP9.9□□□□□ -0.82
SPG11-207ENST00000558138 N4BP3O15049 544 aa9.9□□□□□ -0.82
SPG11-207ENST00000558138 SLC16A4O15374 487 aa9.9□□□□□ -0.82
SPG11-207ENST00000558138 B4GALT5O43286 388 aa9.9□□□□□ -0.82
SPG11-207ENST00000558138 BRD1O95696 1058 aa9.9□□□□□ -0.82
SPG11-207ENST00000558138 EOMESO95936 686 aa9.9□□□□□ -0.82
SPG11-207ENST00000558138 PLS3P13797 630 aa9.9□□□□□ -0.82
SPG11-207ENST00000558138 ARF4P18085 180 aaPredicted RBP9.9□□□□□ -0.82
SPG11-207ENST00000558138 GUCY2CP25092 1073 aa9.9□□□□□ -0.82
SPG11-207ENST00000558138 CA8P35219 290 aa9.9□□□□□ -0.82
SPG11-207ENST00000558138 SLC12A3P55017 1021 aa9.9□□□□□ -0.82
SPG11-207ENST00000558138 ERVK-21P61565 698 aa9.9□□□□□ -0.82
SPG11-207ENST00000558138 POU5F1BQ06416 359 aa9.9□□□□□ -0.82
SPG11-207ENST00000558138 GPM6BQ13491 265 aa9.9□□□□□ -0.82
SPG11-207ENST00000558138 CCDC85BQ15834 202 aaPredicted RBP9.9□□□□□ -0.82
SPG11-207ENST00000558138 PTPROQ16827 1216 aa9.9□□□□□ -0.82
SPG11-207ENST00000558138 EPC2Q52LR7 807 aa9.9□□□□□ -0.82
SPG11-207ENST00000558138 GLB1LQ6UWU2 654 aa9.9□□□□□ -0.82
SPG11-207ENST00000558138 C1orf186Q6ZWK4 172 aa9.9□□□□□ -0.82
SPG11-207ENST00000558138 USP49Q70CQ1 688 aa9.9□□□□□ -0.82
SPG11-207ENST00000558138 DYMQ7RTS9 669 aa9.9□□□□□ -0.82
SPG11-207ENST00000558138 SPRED2Q7Z698 418 aa9.9□□□□□ -0.82
SPG11-207ENST00000558138 CDR2LQ86X02 465 aaPredicted RBP9.9□□□□□ -0.82
SPG11-207ENST00000558138 LRRC43Q8N309 656 aa9.9□□□□□ -0.82
SPG11-207ENST00000558138 CNNM3Q8NE01 707 aa9.9□□□□□ -0.82
SPG11-207ENST00000558138 MAFAQ8NHW3 353 aaPredicted RBP9.9□□□□□ -0.82
SPG11-207ENST00000558138 SP7Q8TDD2 431 aaPredicted RBP9.9□□□□□ -0.82
SPG11-207ENST00000558138 LPPQ93052 612 aa9.9□□□□□ -0.82
SPG11-207ENST00000558138 DHX58Q96C10 678 aa9.9□□□□□ -0.82
SPG11-207ENST00000558138 CCDC51Q96ER9 411 aa9.9□□□□□ -0.82
SPG11-207ENST00000558138 PRIMPOLQ96LW4 560 aa9.9□□□□□ -0.82
SPG11-207ENST00000558138 FAM193BQ96PV7 902 aaPredicted RBP9.9□□□□□ -0.82
SPG11-207ENST00000558138 RPS6KC1Q96S38 1066 aa9.9□□□□□ -0.82
SPG11-207ENST00000558138 MRPL9Q9BYD2 267 aaKnown RBP9.9□□□□□ -0.82
SPG11-207ENST00000558138 NFKBIZQ9BYH8 718 aa9.9□□□□□ -0.82
SPG11-207ENST00000558138 TMEM117Q9H0C3 514 aa9.9□□□□□ -0.82
SPG11-207ENST00000558138 GBP3Q9H0R5 595 aa9.9□□□□□ -0.82
SPG11-207ENST00000558138 LARSQ9P2J5 1176 aaKnown RBP9.9□□□□□ -0.82
SPG11-207ENST00000558138 PARP2Q9UGN5 583 aa9.9□□□□□ -0.82
SPG11-207ENST00000558138 STXBP5LQ9Y2K9 1186 aa9.9□□□□□ -0.82
SPG11-207ENST00000558138 PCDHB2Q9Y5E7 798 aa9.9□□□□□ -0.82
SPG11-207ENST00000558138 PCDHB12Q9Y5F1 795 aa9.9□□□□□ -0.82
SPG11-207ENST00000558138 MRPL42Q9Y6G3 142 aaKnown RBP9.9□□□□□ -0.82
SPG11-207ENST00000558138 TTC3P53804 2025 aa9.9□□□□□ -0.82
SPG11-207ENST00000558138 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.89□□□□□ -0.83
SPG11-207ENST00000558138 H0YCG3 227 aa9.89□□□□□ -0.83
SPG11-207ENST00000558138 HARSP12081 509 aaKnown RBP9.89□□□□□ -0.83
SPG11-207ENST00000558138 IDEP14735 1019 aa9.89□□□□□ -0.83
SPG11-207ENST00000558138 LAG3P18627 525 aa9.89□□□□□ -0.83
SPG11-207ENST00000558138 DDIT3P35638 169 aa9.89□□□□□ -0.83
SPG11-207ENST00000558138 NPTX2P47972 431 aa9.89□□□□□ -0.83
SPG11-207ENST00000558138 CDCA2Q69YH5 1023 aaPredicted RBP9.89□□□□□ -0.83
SPG11-207ENST00000558138 SLC27A1Q6PCB7 646 aa9.89□□□□□ -0.83
SPG11-207ENST00000558138 IFNLR1Q8IU57 520 aaPredicted RBP9.89□□□□□ -0.83
SPG11-207ENST00000558138 THNSL1Q8IYQ7 743 aa9.89□□□□□ -0.83
SPG11-207ENST00000558138 ZNF689Q96CS4 500 aaPredicted RBP9.89□□□□□ -0.83
SPG11-207ENST00000558138 REEP2Q9BRK0 252 aa9.89□□□□□ -0.83
SPG11-207ENST00000558138 TCHPQ9BT92 498 aa9.89□□□□□ -0.83
SPG11-207ENST00000558138 C11orf84Q9BUA3 381 aaPredicted RBP9.89□□□□□ -0.83
SPG11-207ENST00000558138 EIF2AQ9BY44 585 aaKnown RBP9.89□□□□□ -0.83
SPG11-207ENST00000558138 LRRC27Q9C0I9 530 aa9.89□□□□□ -0.83
SPG11-207ENST00000558138 RSAD1Q9HA92 442 aa9.89□□□□□ -0.83
SPG11-207ENST00000558138 C17orf75Q9HAS0 396 aa9.89□□□□□ -0.83
SPG11-207ENST00000558138 PARVGQ9HBI0 331 aa9.89□□□□□ -0.83
SPG11-207ENST00000558138 ODF2LQ9ULJ1 636 aa9.89□□□□□ -0.83
SPG11-207ENST00000558138 LAMA3Q16787 3333 aa9.89□□□□□ -0.83
SPG11-207ENST00000558138 MYH11P35749 1972 aa9.88□□□□□ -0.83
SPG11-207ENST00000558138 CNTNAP2Q9UHC6 1331 aa9.88□□□□□ -0.83
SPG11-207ENST00000558138 NLRC5Q86WI3 1866 aa9.88□□□□□ -0.83
SPG11-207ENST00000558138 GOLGA6L4A6NEF3 574 aa9.88□□□□□ -0.83
SPG11-207ENST00000558138 EPOPA6NHQ4 379 aa9.88□□□□□ -0.83
SPG11-207ENST00000558138 ACKR2O00590 384 aa9.88□□□□□ -0.83
SPG11-207ENST00000558138 ZC3H11AO75152 810 aaKnown RBP eCLIP9.88□□□□□ -0.83
SPG11-207ENST00000558138 SLC34A2O95436 690 aa9.88□□□□□ -0.83
SPG11-207ENST00000558138 BMPR1AP36894 532 aa9.88□□□□□ -0.83
SPG11-207ENST00000558138 FAM189BP81408 668 aa9.88□□□□□ -0.83
SPG11-207ENST00000558138 AMPD3Q01432 767 aa9.88□□□□□ -0.83
SPG11-207ENST00000558138 DCAF4L1Q3SXM0 396 aa9.88□□□□□ -0.83
SPG11-207ENST00000558138 ZNF568Q3ZCX4 644 aa9.88□□□□□ -0.83
SPG11-207ENST00000558138 ATF7IP2Q5U623 682 aa9.88□□□□□ -0.83
SPG11-207ENST00000558138 PPP4R3CPQ6ZMV5 832 aa9.88□□□□□ -0.83
SPG11-207ENST00000558138 EP400NLQ6ZTU2 488 aa9.88□□□□□ -0.83
SPG11-207ENST00000558138 FAM178BQ8IXR5 827 aa9.88□□□□□ -0.83
SPG11-207ENST00000558138 CEP57L1Q8IYX8 460 aa9.88□□□□□ -0.83
SPG11-207ENST00000558138 IQUBQ8NA54 791 aa9.88□□□□□ -0.83
SPG11-207ENST00000558138 ZNF558Q96NG5 402 aa9.88□□□□□ -0.83
SPG11-207ENST00000558138 MRPL4Q9BYD3 311 aaKnown RBP9.88□□□□□ -0.83
SPG11-207ENST00000558138 SCAND2PQ9GZW5 306 aaPredicted RBP9.88□□□□□ -0.83
SPG11-207ENST00000558138 UBN1Q9NPG3 1134 aa9.88□□□□□ -0.83
SPG11-207ENST00000558138 BLOC1S4Q9NUP1 217 aa9.88□□□□□ -0.83
SPG11-207ENST00000558138 TYW1Q9NV66 732 aaKnown RBP9.88□□□□□ -0.83
SPG11-207ENST00000558138 ANKFY1Q9P2R3 1169 aa9.88□□□□□ -0.83
SPG11-207ENST00000558138 PCDHA7Q9UN72 937 aa9.88□□□□□ -0.83
SPG11-207ENST00000558138 USP20Q9Y2K6 914 aa9.88□□□□□ -0.83
SPG11-207ENST00000558138 RBM19Q9Y4C8 960 aaKnown RBP9.88□□□□□ -0.83
SPG11-207ENST00000558138 HES2Q9Y543 173 aa9.88□□□□□ -0.83
SPG11-207ENST00000558138 IPPQ9Y573 584 aa9.88□□□□□ -0.83
SPG11-207ENST00000558138 MORC2Q9Y6X9 1032 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms