RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 EDN1P05305 212 aa9.99□□□□□ -0.81
CHD8-214ENST00000557727 GHRP10912 638 aa9.99□□□□□ -0.81
CHD8-214ENST00000557727 DARSP14868 501 aaKnown RBP9.99□□□□□ -0.81
CHD8-214ENST00000557727 EIF4BP23588 611 aaKnown RBP9.99□□□□□ -0.81
CHD8-214ENST00000557727 TMOD1P28289 359 aa9.99□□□□□ -0.81
CHD8-214ENST00000557727 STAT6P42226 847 aa9.99□□□□□ -0.81
CHD8-214ENST00000557727 RPIAP49247 311 aa9.99□□□□□ -0.81
CHD8-214ENST00000557727 POU5F1BQ06416 359 aa9.99□□□□□ -0.81
CHD8-214ENST00000557727 GIT2Q14161 759 aa9.99□□□□□ -0.81
CHD8-214ENST00000557727 AMHR2Q16671 573 aa9.99□□□□□ -0.81
CHD8-214ENST00000557727 LONRF3Q496Y0 759 aa9.99□□□□□ -0.81
CHD8-214ENST00000557727 CNNM4Q6P4Q7 775 aa9.99□□□□□ -0.81
CHD8-214ENST00000557727 TSHZ1Q6ZSZ6 1077 aa9.99□□□□□ -0.81
CHD8-214ENST00000557727 ZNF365Q70YC5 407 aa9.99□□□□□ -0.81
CHD8-214ENST00000557727 MAEAQ7L5Y9 396 aa9.99□□□□□ -0.81
CHD8-214ENST00000557727 DEFB128Q7Z7B8 93 aa9.99□□□□□ -0.81
CHD8-214ENST00000557727 RSPH3Q86UC2 560 aa9.99□□□□□ -0.81
CHD8-214ENST00000557727 ZNF410Q86VK4 478 aa9.99□□□□□ -0.81
CHD8-214ENST00000557727 FAM228AQ86W67 206 aa9.99□□□□□ -0.81
CHD8-214ENST00000557727 GPBP1Q86WP2 473 aa9.99□□□□□ -0.81
CHD8-214ENST00000557727 FMR1NBQ8N0W7 255 aaPredicted RBP9.99□□□□□ -0.81
CHD8-214ENST00000557727 CRIPAKQ8N1N5 446 aa9.99□□□□□ -0.81
CHD8-214ENST00000557727 TMEM199Q8N511 208 aa9.99□□□□□ -0.81
CHD8-214ENST00000557727 TCP11Q8WWU5 503 aa9.99□□□□□ -0.81
CHD8-214ENST00000557727 MRPS27Q92552 414 aaKnown RBP9.99□□□□□ -0.81
CHD8-214ENST00000557727 KCNN1Q92952 543 aa9.99□□□□□ -0.81
CHD8-214ENST00000557727 DHX58Q96C10 678 aa9.99□□□□□ -0.81
CHD8-214ENST00000557727 CDK5RAP3Q96JB5 506 aa9.99□□□□□ -0.81
CHD8-214ENST00000557727 MAP7D2Q96T17 732 aa9.99□□□□□ -0.81
CHD8-214ENST00000557727 REEP2Q9BRK0 252 aa9.99□□□□□ -0.81
CHD8-214ENST00000557727 FDXACB1Q9BRP7 624 aaPredicted RBP9.99□□□□□ -0.81
CHD8-214ENST00000557727 NFKBIZQ9BYH8 718 aa9.99□□□□□ -0.81
CHD8-214ENST00000557727 CCDC39Q9UFE4 941 aa9.99□□□□□ -0.81
CHD8-214ENST00000557727 PRKAG2Q9UGJ0 569 aa9.99□□□□□ -0.81
CHD8-214ENST00000557727 ANK1P16157 1881 aa9.99□□□□□ -0.81
CHD8-214ENST00000557727 PDCD11Q14690 1871 aaKnown RBP9.99□□□□□ -0.81
CHD8-214ENST00000557727 SZT2Q5T011 3432 aa9.98□□□□□ -0.81
CHD8-214ENST00000557727 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.98□□□□□ -0.81
CHD8-214ENST00000557727 FAM187AA6NFU0 413 aa9.98□□□□□ -0.81
CHD8-214ENST00000557727 ASAP2O43150 1006 aa9.98□□□□□ -0.81
CHD8-214ENST00000557727 MGEA5O60502 916 aa9.98□□□□□ -0.81
CHD8-214ENST00000557727 CSDE1O75534 798 aaKnown RBP9.98□□□□□ -0.81
CHD8-214ENST00000557727 CD52P31358 61 aa9.98□□□□□ -0.81
CHD8-214ENST00000557727 TXLNAP40222 546 aa9.98□□□□□ -0.81
CHD8-214ENST00000557727 DNM2P50570 870 aa9.98□□□□□ -0.81
CHD8-214ENST00000557727 PTENP60484 403 aa9.98□□□□□ -0.81
CHD8-214ENST00000557727 MBTD1Q05BQ5 628 aa9.98□□□□□ -0.81
CHD8-214ENST00000557727 EHHADHQ08426 723 aa9.98□□□□□ -0.81
CHD8-214ENST00000557727 RAD51AP2Q09MP3 1159 aa9.98□□□□□ -0.81
CHD8-214ENST00000557727 PPIGQ13427 754 aaKnown RBP eCLIP9.98□□□□□ -0.81
CHD8-214ENST00000557727 DSC3Q14574 896 aa9.98□□□□□ -0.81
CHD8-214ENST00000557727 MXD4Q14582 209 aaPredicted RBP9.98□□□□□ -0.81
CHD8-214ENST00000557727 FAM102BQ5T8I3 360 aa9.98□□□□□ -0.81
CHD8-214ENST00000557727 TAS1R3Q7RTX0 852 aa9.98□□□□□ -0.81
CHD8-214ENST00000557727 RTN4RL1Q86UN2 441 aaPredicted RBP9.98□□□□□ -0.81
CHD8-214ENST00000557727 FSIP1Q8NA03 581 aa9.98□□□□□ -0.81
CHD8-214ENST00000557727 RDH13Q8NBN7 331 aa9.98□□□□□ -0.81
CHD8-214ENST00000557727 RNF149Q8NC42 400 aa9.98□□□□□ -0.81
CHD8-214ENST00000557727 DBF4BQ8NFT6 615 aa9.98□□□□□ -0.81
CHD8-214ENST00000557727 HERVK_113Q902F9 699 aa9.98□□□□□ -0.81
CHD8-214ENST00000557727 STAMQ92783 540 aa9.98□□□□□ -0.81
CHD8-214ENST00000557727 THAP11Q96EK4 314 aa9.98□□□□□ -0.81
CHD8-214ENST00000557727 NLRP4Q96MN2 994 aa9.98□□□□□ -0.81
CHD8-214ENST00000557727 NTPCRQ9BSD7 190 aaKnown RBP9.98□□□□□ -0.81
CHD8-214ENST00000557727 CCDC113Q9H0I3 377 aa9.98□□□□□ -0.81
CHD8-214ENST00000557727 TNMDQ9H2S6 317 aa9.98□□□□□ -0.81
CHD8-214ENST00000557727 CUEDC2Q9H467 287 aa9.98□□□□□ -0.81
CHD8-214ENST00000557727 CXXC1Q9P0U4 656 aaPredicted RBP9.98□□□□□ -0.81
CHD8-214ENST00000557727 ARHGAP28Q9P2N2 729 aa9.98□□□□□ -0.81
CHD8-214ENST00000557727 SERTAD1Q9UHV2 236 aa9.98□□□□□ -0.81
CHD8-214ENST00000557727 PADI3Q9ULW8 664 aa9.98□□□□□ -0.81
CHD8-214ENST00000557727 CITO14578 2027 aa9.98□□□□□ -0.81
CHD8-214ENST00000557727 NLRC5Q86WI3 1866 aa9.98□□□□□ -0.81
CHD8-214ENST00000557727 MYO9BQ13459 2157 aa9.97□□□□□ -0.81
CHD8-214ENST00000557727 SFI1A8K8P3 1242 aa9.97□□□□□ -0.81
CHD8-214ENST00000557727 SSBP05455 408 aaKnown RBP eCLIP9.97□□□□□ -0.81
CHD8-214ENST00000557727 PFKMP08237 780 aa9.97□□□□□ -0.81
CHD8-214ENST00000557727 SLFN14P0C7P3 912 aa9.97□□□□□ -0.81
CHD8-214ENST00000557727 SRGAP2CP0DJJ0 459 aa9.97□□□□□ -0.81
CHD8-214ENST00000557727 LIG1P18858 919 aa9.97□□□□□ -0.81
CHD8-214ENST00000557727 FGFR4P22455 802 aa9.97□□□□□ -0.81
CHD8-214ENST00000557727 CASP1P29466 404 aa9.97□□□□□ -0.81
CHD8-214ENST00000557727 HOXA11P31270 313 aaPredicted RBP9.97□□□□□ -0.81
CHD8-214ENST00000557727 NAMPTP43490 491 aa9.97□□□□□ -0.81
CHD8-214ENST00000557727 NPTX2P47972 431 aa9.97□□□□□ -0.81
CHD8-214ENST00000557727 DHX8Q14562 1220 aaKnown RBP9.97□□□□□ -0.81
CHD8-214ENST00000557727 SHHQ15465 462 aa9.97□□□□□ -0.81
CHD8-214ENST00000557727 PRPF38BQ5VTL8 546 aaKnown RBP9.97□□□□□ -0.81
CHD8-214ENST00000557727 CNKSR3Q6P9H4 555 aa9.97□□□□□ -0.81
CHD8-214ENST00000557727 GRAMD1CQ8IYS0 662 aa9.97□□□□□ -0.81
CHD8-214ENST00000557727 IQUBQ8NA54 791 aa9.97□□□□□ -0.81
CHD8-214ENST00000557727 USP38Q8NB14 1042 aa9.97□□□□□ -0.81
CHD8-214ENST00000557727 RASSF8Q8NHQ8 419 aa9.97□□□□□ -0.81
CHD8-214ENST00000557727 NLRP7Q8WX94 980 aa9.97□□□□□ -0.81
CHD8-214ENST00000557727 KIFAP3Q92845 792 aa9.97□□□□□ -0.81
CHD8-214ENST00000557727 CCDC43Q96MW1 224 aaKnown RBP9.97□□□□□ -0.81
CHD8-214ENST00000557727 C7orf25Q9BPX7 421 aa9.97□□□□□ -0.81
CHD8-214ENST00000557727 LBHD1Q9BQE6 289 aaPredicted RBP9.97□□□□□ -0.81
CHD8-214ENST00000557727 KIFC3Q9BVG8 833 aa9.97□□□□□ -0.81
CHD8-214ENST00000557727 TIPINQ9BVW5 301 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms