RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 DRC1Q96MC2 740 aa13.82□□□□□ -0.2
SLIRP-211ENST00000557623 PLIN2Q99541 437 aa13.82□□□□□ -0.2
SLIRP-211ENST00000557623 CSRNP2Q9H175 543 aa13.82□□□□□ -0.2
SLIRP-211ENST00000557623 MINDY3Q9H8M7 445 aa13.82□□□□□ -0.2
SLIRP-211ENST00000557623 FAM105AQ9NUU6 356 aa13.82□□□□□ -0.2
SLIRP-211ENST00000557623 DAXXQ9UER7 740 aaPredicted RBP13.82□□□□□ -0.2
SLIRP-211ENST00000557623 KCNG1Q9UIX4 513 aa13.82□□□□□ -0.2
SLIRP-211ENST00000557623 MTUS1Q9ULD2 1270 aa13.82□□□□□ -0.2
SLIRP-211ENST00000557623 PCDHGA4Q9Y5G9 962 aa13.82□□□□□ -0.2
SLIRP-211ENST00000557623 TBKBP1A7MCY6 615 aa13.81□□□□□ -0.2
SLIRP-211ENST00000557623 ZNF623O75123 536 aa13.81□□□□□ -0.2
SLIRP-211ENST00000557623 PPP6R2O75170 966 aa13.81□□□□□ -0.2
SLIRP-211ENST00000557623 YEATS4O95619 227 aa13.81□□□□□ -0.2
SLIRP-211ENST00000557623 SSBP05455 408 aaKnown RBP eCLIP13.81□□□□□ -0.2
SLIRP-211ENST00000557623 RB1P06400 928 aa13.81□□□□□ -0.2
SLIRP-211ENST00000557623 PLA2G4BP0C869 781 aa13.81□□□□□ -0.2
SLIRP-211ENST00000557623 POU3F3P20264 500 aaPredicted RBP13.81□□□□□ -0.2
SLIRP-211ENST00000557623 IGFBP4P22692 258 aa13.81□□□□□ -0.2
SLIRP-211ENST00000557623 GUCY2CP25092 1073 aa13.81□□□□□ -0.2
SLIRP-211ENST00000557623 SLC12A3P55017 1021 aa13.81□□□□□ -0.2
SLIRP-211ENST00000557623 PAN2Q504Q3 1202 aaKnown RBP13.81□□□□□ -0.2
SLIRP-211ENST00000557623 EPC2Q52LR7 807 aa13.81□□□□□ -0.2
SLIRP-211ENST00000557623 CDCA2Q69YH5 1023 aaPredicted RBP13.81□□□□□ -0.2
SLIRP-211ENST00000557623 NOTUMQ6P988 496 aa13.81□□□□□ -0.2
SLIRP-211ENST00000557623 C1orf186Q6ZWK4 172 aa13.81□□□□□ -0.2
SLIRP-211ENST00000557623 LINC00301Q8NCQ3 95 aa13.81□□□□□ -0.2
SLIRP-211ENST00000557623 CNNM3Q8NE01 707 aa13.81□□□□□ -0.2
SLIRP-211ENST00000557623 DEPTORQ8TB45 409 aa13.81□□□□□ -0.2
SLIRP-211ENST00000557623 CLP1Q92989 425 aaKnown RBP13.81□□□□□ -0.2
SLIRP-211ENST00000557623 PGBD4Q96DM1 585 aa13.81□□□□□ -0.2
SLIRP-211ENST00000557623 PRIMPOLQ96LW4 560 aa13.81□□□□□ -0.2
SLIRP-211ENST00000557623 C17orf80Q9BSJ5 609 aa13.81□□□□□ -0.2
SLIRP-211ENST00000557623 TMEM117Q9H0C3 514 aa13.81□□□□□ -0.2
SLIRP-211ENST00000557623 C17orf75Q9HAS0 396 aa13.81□□□□□ -0.2
SLIRP-211ENST00000557623 PRMT7Q9NVM4 692 aaPredicted RBP13.81□□□□□ -0.2
SLIRP-211ENST00000557623 LMCD1Q9NZU5 365 aa13.81□□□□□ -0.2
SLIRP-211ENST00000557623 CFAP45Q9UL16 551 aa13.81□□□□□ -0.2
SLIRP-211ENST00000557623 TCHHQ07283 1943 aa13.8□□□□□ -0.2
SLIRP-211ENST00000557623 EPOPA6NHQ4 379 aa13.8□□□□□ -0.2
SLIRP-211ENST00000557623 C5orf67F2Z3F1 127 aa13.8□□□□□ -0.2
SLIRP-211ENST00000557623 RFXAPO00287 272 aa13.8□□□□□ -0.2
SLIRP-211ENST00000557623 SPTLC2O15270 562 aa13.8□□□□□ -0.2
SLIRP-211ENST00000557623 TSPAN1O60635 241 aa13.8□□□□□ -0.2
SLIRP-211ENST00000557623 HIP1RO75146 1068 aa13.8□□□□□ -0.2
SLIRP-211ENST00000557623 HOXA11P31270 313 aaPredicted RBP13.8□□□□□ -0.2
SLIRP-211ENST00000557623 CTNNB1P35222 781 aa13.8□□□□□ -0.2
SLIRP-211ENST00000557623 BMPR1AP36894 532 aa13.8□□□□□ -0.2
SLIRP-211ENST00000557623 EFNA5P52803 228 aa13.8□□□□□ -0.2
SLIRP-211ENST00000557623 DMP1Q13316 513 aaPredicted RBP13.8□□□□□ -0.2
SLIRP-211ENST00000557623 ADGRE1Q14246 886 aa13.8□□□□□ -0.2
SLIRP-211ENST00000557623 KARSQ15046 597 aaKnown RBP13.8□□□□□ -0.2
SLIRP-211ENST00000557623 MAPK6Q16659 721 aa13.8□□□□□ -0.2
SLIRP-211ENST00000557623 FAM187BQ17R55 369 aa13.8□□□□□ -0.2
SLIRP-211ENST00000557623 ZNF598Q86UK7 904 aaKnown RBP13.8□□□□□ -0.2
SLIRP-211ENST00000557623 RNF169Q8NCN4 708 aa13.8□□□□□ -0.2
SLIRP-211ENST00000557623 MAFAQ8NHW3 353 aaPredicted RBP13.8□□□□□ -0.2
SLIRP-211ENST00000557623 PTCD2Q8WV60 388 aaKnown RBP13.8□□□□□ -0.2
SLIRP-211ENST00000557623 BSNDQ8WZ55 320 aa13.8□□□□□ -0.2
SLIRP-211ENST00000557623 RUSC1Q9BVN2 902 aa13.8□□□□□ -0.2
SLIRP-211ENST00000557623 PLVAPQ9BX97 442 aa13.8□□□□□ -0.2
SLIRP-211ENST00000557623 AAASQ9NRG9 546 aa13.8□□□□□ -0.2
SLIRP-211ENST00000557623 TFIP11Q9UBB9 837 aaKnown RBP13.8□□□□□ -0.2
SLIRP-211ENST00000557623 MRPL42Q9Y6G3 142 aaKnown RBP13.8□□□□□ -0.2
SLIRP-211ENST00000557623 PHLPP2Q6ZVD8 1323 aa13.8□□□□□ -0.2
SLIRP-211ENST00000557623 TDRD15B5MCY1 1934 aaKnown RBP13.8□□□□□ -0.2
SLIRP-211ENST00000557623 H3BNC9 293 aa13.79□□□□□ -0.2
SLIRP-211ENST00000557623 FGFR1P11362 822 aa13.79□□□□□ -0.2
SLIRP-211ENST00000557623 PLCG1P19174 1290 aa13.79□□□□□ -0.2
SLIRP-211ENST00000557623 GATMP50440 423 aa13.79□□□□□ -0.2
SLIRP-211ENST00000557623 PKP1Q13835 747 aa13.79□□□□□ -0.2
SLIRP-211ENST00000557623 AMHR2Q16671 573 aa13.79□□□□□ -0.2
SLIRP-211ENST00000557623 NAALADL2Q58DX5 795 aa13.79□□□□□ -0.2
SLIRP-211ENST00000557623 SPECC1Q5M775 1068 aa13.79□□□□□ -0.2
SLIRP-211ENST00000557623 SPOUT1Q5T280 376 aaKnown RBP13.79□□□□□ -0.2
SLIRP-211ENST00000557623 SPRED2Q7Z698 418 aa13.79□□□□□ -0.2
SLIRP-211ENST00000557623 HACE1Q8IYU2 909 aa13.79□□□□□ -0.2
SLIRP-211ENST00000557623 LRRC43Q8N309 656 aa13.79□□□□□ -0.2
SLIRP-211ENST00000557623 KCNG4Q8TDN1 519 aa13.79□□□□□ -0.2
SLIRP-211ENST00000557623 RAD54LQ92698 747 aa13.79□□□□□ -0.2
SLIRP-211ENST00000557623 SYMPKQ92797 1274 aaKnown RBP13.79□□□□□ -0.2
SLIRP-211ENST00000557623 EPSTI1Q96J88 318 aa13.79□□□□□ -0.2
SLIRP-211ENST00000557623 CLIC6Q96NY7 704 aa13.79□□□□□ -0.2
SLIRP-211ENST00000557623 C11orf84Q9BUA3 381 aaPredicted RBP13.79□□□□□ -0.2
SLIRP-211ENST00000557623 MRPL9Q9BYD2 267 aaKnown RBP13.79□□□□□ -0.2
SLIRP-211ENST00000557623 FZD8Q9H461 694 aa13.79□□□□□ -0.2
SLIRP-211ENST00000557623 STK17AQ9UEE5 414 aa13.79□□□□□ -0.2
SLIRP-211ENST00000557623 PCDHB2Q9Y5E7 798 aa13.79□□□□□ -0.2
SLIRP-211ENST00000557623 PLXNA4Q9HCM2 1894 aa13.78□□□□□ -0.2
SLIRP-211ENST00000557623 CCDC169A6NNP5 214 aa13.78□□□□□ -0.2
SLIRP-211ENST00000557623 LPXNO60711 386 aa13.78□□□□□ -0.2
SLIRP-211ENST00000557623 BRD1O95696 1058 aa13.78□□□□□ -0.2
SLIRP-211ENST00000557623 PRKCBP05771 671 aa13.78□□□□□ -0.2
SLIRP-211ENST00000557623 LINC00271P0C7V0 271 aa13.78□□□□□ -0.2
SLIRP-211ENST00000557623 ATF7P17544 494 aaPredicted RBP13.78□□□□□ -0.2
SLIRP-211ENST00000557623 ARF4P18085 180 aaPredicted RBP13.78□□□□□ -0.2
SLIRP-211ENST00000557623 NCLP19338 710 aaKnown RBP13.78□□□□□ -0.2
SLIRP-211ENST00000557623 DDIT3P35638 169 aa13.78□□□□□ -0.2
SLIRP-211ENST00000557623 PEX3P56589 373 aa13.78□□□□□ -0.2
SLIRP-211ENST00000557623 GPM6BQ13491 265 aa13.78□□□□□ -0.2
SLIRP-211ENST00000557623 PTPROQ16827 1216 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms