RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 BEAN1Q3B7T3 259 aa4.6□□□□□ -1.67
FOXN3-217ENST00000557572 NDC1Q9BTX1 674 aa4.6□□□□□ -1.67
FOXN3-217ENST00000557572 EPC1Q9H2F5 836 aa4.6□□□□□ -1.67
FOXN3-217ENST00000557572 ZNF580Q9UK33 172 aa4.6□□□□□ -1.67
FOXN3-217ENST00000557572 SBNO2Q9Y2G9 1366 aa4.6□□□□□ -1.67
FOXN3-217ENST00000557572 GAGE12BA1L429 117 aa4.59□□□□□ -1.67
FOXN3-217ENST00000557572 GAGE12HA6NDE8 117 aa4.59□□□□□ -1.67
FOXN3-217ENST00000557572 PLEKHD1A6NEE1 506 aa4.59□□□□□ -1.67
FOXN3-217ENST00000557572 TKTP29401 623 aaKnown RBP4.59□□□□□ -1.67
FOXN3-217ENST00000557572 BMPR1AP36894 532 aa4.59□□□□□ -1.67
FOXN3-217ENST00000557572 ANTXR2P58335 489 aa4.59□□□□□ -1.67
FOXN3-217ENST00000557572 OCA2Q04671 838 aa4.59□□□□□ -1.67
FOXN3-217ENST00000557572 TP53BP2Q13625 1128 aa4.59□□□□□ -1.67
FOXN3-217ENST00000557572 GNL2Q13823 731 aaKnown RBP4.59□□□□□ -1.67
FOXN3-217ENST00000557572 SEC23AQ15436 765 aa4.59□□□□□ -1.67
FOXN3-217ENST00000557572 CRY1Q16526 586 aa4.59□□□□□ -1.67
FOXN3-217ENST00000557572 BRAPQ7Z569 592 aa4.59□□□□□ -1.67
FOXN3-217ENST00000557572 DCLRE1CQ96SD1 692 aaKnown RBP4.59□□□□□ -1.67
FOXN3-217ENST00000557572 HAPLN2Q9GZV7 340 aa4.59□□□□□ -1.67
FOXN3-217ENST00000557572 SMURF1Q9HCE7 757 aa4.59□□□□□ -1.67
FOXN3-217ENST00000557572 PYGMP11217 842 aa4.58□□□□□ -1.68
FOXN3-217ENST00000557572 SIM1P81133 766 aaPredicted RBP4.58□□□□□ -1.68
FOXN3-217ENST00000557572 VPS72Q15906 364 aa4.58□□□□□ -1.68
FOXN3-217ENST00000557572 SRSF7Q16629 238 aaKnown RBP eCLIP4.58□□□□□ -1.68
FOXN3-217ENST00000557572 FAM47CQ5HY64 1035 aa4.58□□□□□ -1.68
FOXN3-217ENST00000557572 NOSTRINQ8IVI9 506 aa4.58□□□□□ -1.68
FOXN3-217ENST00000557572 CELF2-AS1Q8N7Q2 184 aa4.58□□□□□ -1.68
FOXN3-217ENST00000557572 ASB10Q8WXI3 467 aa4.58□□□□□ -1.68
FOXN3-217ENST00000557572 FCRL4Q96PJ5 515 aa4.58□□□□□ -1.68
FOXN3-217ENST00000557572 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.58□□□□□ -1.682e-10■■■□□ 17.1
FOXN3-217ENST00000557572 KCNH7Q9NS40 1196 aa4.58□□□□□ -1.68
FOXN3-217ENST00000557572 CBLCQ9ULV8 474 aa4.58□□□□□ -1.68
FOXN3-217ENST00000557572 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.58□□□□□ -1.68
FOXN3-217ENST00000557572 GOLGA6L22H0YM25 854 aa4.57□□□□□ -1.68
FOXN3-217ENST00000557572 KLF4O43474 513 aa4.57□□□□□ -1.68
FOXN3-217ENST00000557572 ERCC5P28715 1186 aaPredicted RBP4.57□□□□□ -1.68
FOXN3-217ENST00000557572 ZNF169Q14929 603 aaPredicted RBP4.57□□□□□ -1.68
FOXN3-217ENST00000557572 KRTAP27-1Q3LI81 207 aa4.57□□□□□ -1.68
FOXN3-217ENST00000557572 CLEC14AQ86T13 490 aa4.57□□□□□ -1.68
FOXN3-217ENST00000557572 MTDHQ86UE4 582 aaKnown RBP4.57□□□□□ -1.68
FOXN3-217ENST00000557572 DDB2Q92466 427 aa4.57□□□□□ -1.68
FOXN3-217ENST00000557572 DLG3Q92796 817 aa4.57□□□□□ -1.68
FOXN3-217ENST00000557572 NKD2Q969F2 451 aaPredicted RBP4.57□□□□□ -1.68
FOXN3-217ENST00000557572 DNAJC2Q99543 621 aaKnown RBP4.57□□□□□ -1.68
FOXN3-217ENST00000557572 ALOXE3Q9BYJ1 711 aa4.57□□□□□ -1.68
FOXN3-217ENST00000557572 CPEB1Q9BZB8 566 aaKnown RBP4.57□□□□□ -1.68
FOXN3-217ENST00000557572 R3HCC1Q9Y3T6 440 aaKnown RBP4.57□□□□□ -1.68
FOXN3-217ENST00000557572 SCDO00767 359 aa4.56□□□□□ -1.68
FOXN3-217ENST00000557572 MGST3O14880 152 aa4.56□□□□□ -1.68
FOXN3-217ENST00000557572 DAPK3O43293 454 aa4.56□□□□□ -1.68
FOXN3-217ENST00000557572 TPD52L2O43399 206 aaKnown RBP4.56□□□□□ -1.68
FOXN3-217ENST00000557572 PROP1O75360 226 aa4.56□□□□□ -1.68
FOXN3-217ENST00000557572 C6orf222P0C671 652 aaPredicted RBP4.56□□□□□ -1.68
FOXN3-217ENST00000557572 EGR2P11161 476 aaPredicted RBP4.56□□□□□ -1.68
FOXN3-217ENST00000557572 ITGAMP11215 1152 aa4.56□□□□□ -1.68
FOXN3-217ENST00000557572 DDX6P26196 483 aaKnown RBP eCLIP4.56□□□□□ -1.68
FOXN3-217ENST00000557572 RARRES1P49788 294 aa4.56□□□□□ -1.68
FOXN3-217ENST00000557572 SUMO1P63165 101 aaKnown RBP4.56□□□□□ -1.68
FOXN3-217ENST00000557572 GABREP78334 506 aa4.56□□□□□ -1.68
FOXN3-217ENST00000557572 EGFLAMQ63HQ2 1017 aa4.56□□□□□ -1.68
FOXN3-217ENST00000557572 ZNF517Q6ZMY9 492 aaPredicted RBP4.56□□□□□ -1.68
FOXN3-217ENST00000557572 ZNF788Q6ZQV5 615 aa4.56□□□□□ -1.68
FOXN3-217ENST00000557572 NOP9Q86U38 636 aaKnown RBP4.56□□□□□ -1.68
FOXN3-217ENST00000557572 GLB1L3Q8NCI6 653 aaPredicted RBP4.56□□□□□ -1.68
FOXN3-217ENST00000557572 ERCC4Q92889 916 aaPredicted RBP4.56□□□□□ -1.68
FOXN3-217ENST00000557572 RGMAQ96B86 450 aa4.56□□□□□ -1.68
FOXN3-217ENST00000557572 NELL2Q99435 816 aa4.56□□□□□ -1.68
FOXN3-217ENST00000557572 FOXB1Q99853 325 aa4.56□□□□□ -1.68
FOXN3-217ENST00000557572 WACQ9BTA9 647 aa4.56□□□□□ -1.68
FOXN3-217ENST00000557572 RNF181Q9P0P0 153 aa4.56□□□□□ -1.68
FOXN3-217ENST00000557572 TRAF6Q9Y4K3 522 aa4.56□□□□□ -1.68
FOXN3-217ENST00000557572 B3GALT1Q9Y5Z6 326 aa4.56□□□□□ -1.68
FOXN3-217ENST00000557572 TLDC2A0PJX2 215 aa4.55□□□□□ -1.68
FOXN3-217ENST00000557572 FOXP2O15409 715 aa4.55□□□□□ -1.68
FOXN3-217ENST00000557572 HOXA3O43365 443 aaPredicted RBP4.55□□□□□ -1.68
FOXN3-217ENST00000557572 CACNA2D1P54289 1103 aa4.55□□□□□ -1.68
FOXN3-217ENST00000557572 DGKDQ16760 1214 aa4.55□□□□□ -1.68
FOXN3-217ENST00000557572 METTL24Q5JXM2 366 aa4.55□□□□□ -1.68
FOXN3-217ENST00000557572 PIK3R6Q5UE93 754 aa4.55□□□□□ -1.68
FOXN3-217ENST00000557572 YOD1Q5VVQ6 348 aaPredicted RBP4.55□□□□□ -1.68
FOXN3-217ENST00000557572 FAM83AQ86UY5 434 aa4.55□□□□□ -1.68
FOXN3-217ENST00000557572 PLXDC1Q8IUK5 500 aa4.55□□□□□ -1.68
FOXN3-217ENST00000557572 OR52N2Q8NGI0 321 aa4.55□□□□□ -1.68
FOXN3-217ENST00000557572 GMLQ99445 158 aa4.55□□□□□ -1.68
FOXN3-217ENST00000557572 TEX101Q9BY14 249 aa4.55□□□□□ -1.68
FOXN3-217ENST00000557572 KLK15Q9H2R5 256 aa4.55□□□□□ -1.68
FOXN3-217ENST00000557572 PIF1Q9H611 641 aa4.55□□□□□ -1.68
FOXN3-217ENST00000557572 KLHL42Q9P2K6 505 aa4.55□□□□□ -1.68
FOXN3-217ENST00000557572 CCDC66A2RUB6 948 aa4.54□□□□□ -1.68
FOXN3-217ENST00000557572 RASSF10A6NK89 507 aa4.54□□□□□ -1.68
FOXN3-217ENST00000557572 LEFTY2O00292 366 aa4.54□□□□□ -1.68
FOXN3-217ENST00000557572 SPDEFO95238 335 aa4.54□□□□□ -1.68
FOXN3-217ENST00000557572 MAP4K4O95819 1239 aaPredicted RBP4.54□□□□□ -1.68
FOXN3-217ENST00000557572 KRT10P13645 584 aa4.54□□□□□ -1.68
FOXN3-217ENST00000557572 PTGER1P34995 402 aa4.54□□□□□ -1.68
FOXN3-217ENST00000557572 RNASE9P60153 205 aaKnown RBP4.54□□□□□ -1.68
FOXN3-217ENST00000557572 GUCY1A3Q02108 690 aa4.54□□□□□ -1.68
FOXN3-217ENST00000557572 ALDH6A1Q02252 535 aaKnown RBP4.54□□□□□ -1.68
FOXN3-217ENST00000557572 ARID5AQ03989 594 aa4.54□□□□□ -1.68
FOXN3-217ENST00000557572 EZH2Q15910 746 aaKnown RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms