RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 VTNP04004 478 aa6.65□□□□□ -1.34
VPS33B-207ENST00000557470 GSPT1P15170 499 aaKnown RBP6.65□□□□□ -1.34
VPS33B-207ENST00000557470 RXRAP19793 462 aa6.65□□□□□ -1.34
VPS33B-207ENST00000557470 SMARCA1P28370 1054 aa6.65□□□□□ -1.34
VPS33B-207ENST00000557470 PPM1AP35813 382 aa6.65□□□□□ -1.34
VPS33B-207ENST00000557470 SLC26A2P50443 739 aa6.65□□□□□ -1.34
VPS33B-207ENST00000557470 ITIH3Q06033 890 aa6.65□□□□□ -1.34
VPS33B-207ENST00000557470 NNTQ13423 1086 aa6.65□□□□□ -1.34
VPS33B-207ENST00000557470 DSC3Q14574 896 aa6.65□□□□□ -1.34
VPS33B-207ENST00000557470 TSNAXIP1Q2TAA8 658 aa6.65□□□□□ -1.34
VPS33B-207ENST00000557470 CES5AQ6NT32 575 aa6.65□□□□□ -1.34
VPS33B-207ENST00000557470 KANK3Q6NY19 840 aa6.65□□□□□ -1.34
VPS33B-207ENST00000557470 FAM43BQ6ZT52 329 aaPredicted RBP6.65□□□□□ -1.34
VPS33B-207ENST00000557470 ERMP1Q7Z2K6 904 aa6.65□□□□□ -1.34
VPS33B-207ENST00000557470 TMC7Q7Z402 723 aa6.65□□□□□ -1.34
VPS33B-207ENST00000557470 FAM228AQ86W67 206 aa6.65□□□□□ -1.34
VPS33B-207ENST00000557470 RAB11FIP4Q86YS3 637 aa6.65□□□□□ -1.34
VPS33B-207ENST00000557470 CCDC60Q8IWA6 550 aaPredicted RBP6.65□□□□□ -1.34
VPS33B-207ENST00000557470 ADSSL1Q8N142 457 aa6.65□□□□□ -1.34
VPS33B-207ENST00000557470 LRRC43Q8N309 656 aa6.65□□□□□ -1.34
VPS33B-207ENST00000557470 C12orf76Q8N812 135 aaPredicted RBP6.65□□□□□ -1.34
VPS33B-207ENST00000557470 MRPL43Q8N983 215 aaKnown RBP6.65□□□□□ -1.34
VPS33B-207ENST00000557470 FEZF2Q8TBJ5 459 aa6.65□□□□□ -1.34
VPS33B-207ENST00000557470 ZNF558Q96NG5 402 aa6.65□□□□□ -1.34
VPS33B-207ENST00000557470 NECTIN4Q96NY8 510 aa6.65□□□□□ -1.34
VPS33B-207ENST00000557470 LZTS2Q9BRK4 669 aa6.65□□□□□ -1.34
VPS33B-207ENST00000557470 SDF4Q9BRK5 362 aa6.65□□□□□ -1.34
VPS33B-207ENST00000557470 MFSD1Q9H3U5 465 aa6.65□□□□□ -1.34
VPS33B-207ENST00000557470 RWDD1Q9H446 243 aaPredicted RBP6.65□□□□□ -1.34
VPS33B-207ENST00000557470 ELAC1Q9H777 363 aaKnown RBP6.65□□□□□ -1.34
VPS33B-207ENST00000557470 AGO4Q9HCK5 861 aaKnown RBP6.65□□□□□ -1.34
VPS33B-207ENST00000557470 NOVA2Q9UNW9 492 aaKnown RBP6.65□□□□□ -1.34
VPS33B-207ENST00000557470 NFASCO94856 1347 aa6.65□□□□□ -1.35
VPS33B-207ENST00000557470 MYO10Q9HD67 2058 aa6.64□□□□□ -1.35
VPS33B-207ENST00000557470 DDX39AO00148 427 aaKnown RBP6.64□□□□□ -1.35
VPS33B-207ENST00000557470 BACH1O14867 736 aa6.64□□□□□ -1.35
VPS33B-207ENST00000557470 HBP1O60381 514 aa6.64□□□□□ -1.35
VPS33B-207ENST00000557470 ATP4AP20648 1035 aa6.64□□□□□ -1.35
VPS33B-207ENST00000557470 MTHFRP42898 656 aa6.64□□□□□ -1.35
VPS33B-207ENST00000557470 ID4P47928 161 aa6.64□□□□□ -1.35
VPS33B-207ENST00000557470 GNAQP50148 359 aa6.64□□□□□ -1.35
VPS33B-207ENST00000557470 CRYBB1P53674 252 aaPredicted RBP6.64□□□□□ -1.35
VPS33B-207ENST00000557470 KRT17Q04695 432 aa6.64□□□□□ -1.35
VPS33B-207ENST00000557470 COL9A3Q14050 684 aaPredicted RBP6.64□□□□□ -1.35
VPS33B-207ENST00000557470 SMC1AQ14683 1233 aaKnown RBP6.64□□□□□ -1.35
VPS33B-207ENST00000557470 ARID5BQ14865 1188 aa6.64□□□□□ -1.35
VPS33B-207ENST00000557470 AGERQ15109 404 aa6.64□□□□□ -1.35
VPS33B-207ENST00000557470 CEP55Q53EZ4 464 aa6.64□□□□□ -1.35
VPS33B-207ENST00000557470 CLLU1OSQ5K130 101 aa6.64□□□□□ -1.35
VPS33B-207ENST00000557470 ODR4Q5SWX8 454 aa6.64□□□□□ -1.35
VPS33B-207ENST00000557470 RARS2Q5T160 578 aaKnown RBP6.64□□□□□ -1.35
VPS33B-207ENST00000557470 CWF19L1Q69YN2 538 aaKnown RBP6.64□□□□□ -1.35
VPS33B-207ENST00000557470 MCTP2Q6DN12 878 aa6.64□□□□□ -1.35
VPS33B-207ENST00000557470 ABHD15Q6UXT9 468 aa6.64□□□□□ -1.35
VPS33B-207ENST00000557470 NFXL1Q6ZNB6 911 aa6.64□□□□□ -1.35
VPS33B-207ENST00000557470 HEATR3Q7Z4Q2 680 aa6.64□□□□□ -1.35
VPS33B-207ENST00000557470 ZDHHC14Q8IZN3 488 aa6.64□□□□□ -1.35
VPS33B-207ENST00000557470 SLC39A11Q8N1S5 342 aa6.64□□□□□ -1.35
VPS33B-207ENST00000557470 TDRD5Q8NAT2 981 aaKnown RBP6.64□□□□□ -1.35
VPS33B-207ENST00000557470 RNF169Q8NCN4 708 aa6.64□□□□□ -1.35
VPS33B-207ENST00000557470 FLCNQ8NFG4 579 aa6.64□□□□□ -1.35
VPS33B-207ENST00000557470 FAM174AQ8TBP5 190 aa6.64□□□□□ -1.35
VPS33B-207ENST00000557470 PGBD1Q96JS3 809 aa6.64□□□□□ -1.35
VPS33B-207ENST00000557470 SPG21Q9NZD8 308 aa6.64□□□□□ -1.35
VPS33B-207ENST00000557470 EPG5Q9HCE0 2579 aa6.64□□□□□ -1.35
VPS33B-207ENST00000557470 COL1A2P08123 1366 aa6.64□□□□□ -1.35
VPS33B-207ENST00000557470 DNAH14Q0VDD8 3507 aa6.63□□□□□ -1.35
VPS33B-207ENST00000557470 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.63□□□□□ -1.35
VPS33B-207ENST00000557470 CCDC69A6NI79 296 aa6.63□□□□□ -1.35
VPS33B-207ENST00000557470 NT5C1B-RDH14C9J2C7 533 aa6.63□□□□□ -1.35
VPS33B-207ENST00000557470 MEIS1O00470 390 aa6.63□□□□□ -1.35
VPS33B-207ENST00000557470 SH2B2O14492 632 aaPredicted RBP6.63□□□□□ -1.35
VPS33B-207ENST00000557470 PRC1O43663 620 aa6.63□□□□□ -1.35
VPS33B-207ENST00000557470 PI15O43692 258 aa6.63□□□□□ -1.35
VPS33B-207ENST00000557470 EOMESO95936 686 aa6.63□□□□□ -1.35
VPS33B-207ENST00000557470 EPCAMP16422 314 aa6.63□□□□□ -1.35
VPS33B-207ENST00000557470 NPR3P17342 541 aa6.63□□□□□ -1.35
VPS33B-207ENST00000557470 CHMLP26374 656 aa6.63□□□□□ -1.35
VPS33B-207ENST00000557470 CA8P35219 290 aa6.63□□□□□ -1.35
VPS33B-207ENST00000557470 SERPINB4P48594 390 aa6.63□□□□□ -1.35
VPS33B-207ENST00000557470 CLCN3P51790 818 aa6.63□□□□□ -1.35
VPS33B-207ENST00000557470 CLCN5P51795 746 aa6.63□□□□□ -1.35
VPS33B-207ENST00000557470 ZNF484Q5JVG2 852 aa6.63□□□□□ -1.35
VPS33B-207ENST00000557470 LCE2CQ5TA81 110 aa6.63□□□□□ -1.35
VPS33B-207ENST00000557470 TTC22Q5TAA0 569 aa6.63□□□□□ -1.35
VPS33B-207ENST00000557470 FAM160B1Q5W0V3 765 aa6.63□□□□□ -1.35
VPS33B-207ENST00000557470 WWC2Q6AWC2 1192 aa6.63□□□□□ -1.35
VPS33B-207ENST00000557470 KIAA1841Q6NSI8 718 aa6.63□□□□□ -1.35
VPS33B-207ENST00000557470 SWSAP1Q6NVH7 229 aa6.63□□□□□ -1.35
VPS33B-207ENST00000557470 PDXDC2PQ6P474 469 aa6.63□□□□□ -1.35
VPS33B-207ENST00000557470 CASC1Q6TDU7 716 aa6.63□□□□□ -1.35
VPS33B-207ENST00000557470 TMTC3Q6ZXV5 915 aa6.63□□□□□ -1.35
VPS33B-207ENST00000557470 TRMT1LQ7Z2T5 733 aaKnown RBP6.63□□□□□ -1.35
VPS33B-207ENST00000557470 TMEM173Q86WV6 379 aaPredicted RBP6.63□□□□□ -1.35
VPS33B-207ENST00000557470 ECHDC2Q86YB7 292 aa6.63□□□□□ -1.35
VPS33B-207ENST00000557470 ABI1Q8IZP0 508 aa6.63□□□□□ -1.35
VPS33B-207ENST00000557470 METTL13Q8N6R0 699 aa6.63□□□□□ -1.35
VPS33B-207ENST00000557470 HELQQ8TDG4 1101 aa6.63□□□□□ -1.35
VPS33B-207ENST00000557470 LRRN4Q8WUT4 740 aa6.63□□□□□ -1.35
VPS33B-207ENST00000557470 RUFY2Q8WXA3 655 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms