RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 YBX2Q9Y2T7 364 aaKnown RBP23.06■■□□□ 1.28
SEC23A-213ENST00000557280 CNTNAP2Q9UHC6 1331 aa23.06■■□□□ 1.28
SEC23A-213ENST00000557280 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.05■■□□□ 1.28
SEC23A-213ENST00000557280 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.05■■□□□ 1.28
SEC23A-213ENST00000557280 K7ENM7 598 aa23.05■■□□□ 1.28
SEC23A-213ENST00000557280 TRAK2O60296 914 aa23.05■■□□□ 1.28
SEC23A-213ENST00000557280 ZNF202O95125 648 aa23.05■■□□□ 1.28
SEC23A-213ENST00000557280 GJB5O95377 273 aa23.05■■□□□ 1.28
SEC23A-213ENST00000557280 PRR29P0C7W0 189 aa23.05■■□□□ 1.28
SEC23A-213ENST00000557280 MAPTP10636 758 aaKnown RBP23.05■■□□□ 1.28
SEC23A-213ENST00000557280 ZSCAN20P17040 1043 aaPredicted RBP23.05■■□□□ 1.28
SEC23A-213ENST00000557280 ATF7P17544 494 aaPredicted RBP23.05■■□□□ 1.28
SEC23A-213ENST00000557280 NMT1P30419 496 aaKnown RBP23.05■■□□□ 1.28
SEC23A-213ENST00000557280 SARSP49591 514 aaKnown RBP23.05■■□□□ 1.28
SEC23A-213ENST00000557280 ASIC1P78348 528 aa23.05■■□□□ 1.28
SEC23A-213ENST00000557280 SNW1Q13573 536 aaKnown RBP23.05■■□□□ 1.28
SEC23A-213ENST00000557280 MAPK6Q16659 721 aa23.05■■□□□ 1.28
SEC23A-213ENST00000557280 CSPP1Q1MSJ5 1256 aa23.05■■□□□ 1.28
SEC23A-213ENST00000557280 NT5DC1Q5TFE4 455 aa23.05■■□□□ 1.28
SEC23A-213ENST00000557280 TWF2Q6IBS0 349 aaKnown RBP23.05■■□□□ 1.28
SEC23A-213ENST00000557280 KRBA2Q6ZNG9 492 aa23.05■■□□□ 1.28
SEC23A-213ENST00000557280 CLEC17AQ6ZS10 378 aa23.05■■□□□ 1.28
SEC23A-213ENST00000557280 SLC24A5Q71RS6 500 aa23.05■■□□□ 1.28
SEC23A-213ENST00000557280 LRCH3Q96II8 777 aa23.05■■□□□ 1.28
SEC23A-213ENST00000557280 C7orf25Q9BPX7 421 aa23.05■■□□□ 1.28
SEC23A-213ENST00000557280 EIF2AQ9BY44 585 aaKnown RBP23.05■■□□□ 1.28
SEC23A-213ENST00000557280 CHST12Q9NRB3 414 aa23.05■■□□□ 1.28
SEC23A-213ENST00000557280 TBC1D7Q9P0N9 293 aa23.05■■□□□ 1.28
SEC23A-213ENST00000557280 TTC3P53804 2025 aa23.04■■□□□ 1.28
SEC23A-213ENST00000557280 LCHNA4D1U4 455 aa23.04■■□□□ 1.28
SEC23A-213ENST00000557280 ARHGEF15O94989 841 aa23.04■■□□□ 1.28
SEC23A-213ENST00000557280 GATMP50440 423 aa23.04■■□□□ 1.28
SEC23A-213ENST00000557280 EFNA5P52803 228 aa23.04■■□□□ 1.28
SEC23A-213ENST00000557280 PCBP1Q15365 356 aaKnown RBP eCLIP23.04■■□□□ 1.28
SEC23A-213ENST00000557280 CNNM4Q6P4Q7 775 aa23.04■■□□□ 1.28
SEC23A-213ENST00000557280 HPS3Q969F9 1004 aa23.04■■□□□ 1.28
SEC23A-213ENST00000557280 C1orf112Q9NSG2 853 aa23.04■■□□□ 1.28
SEC23A-213ENST00000557280 PANK4Q9NVE7 773 aa23.04■■□□□ 1.28
SEC23A-213ENST00000557280 K7ERI5 159 aa23.03■■□□□ 1.28
SEC23A-213ENST00000557280 ACKR2O00590 384 aa23.03■■□□□ 1.28
SEC23A-213ENST00000557280 SMTNP53814 917 aa23.03■■□□□ 1.28
SEC23A-213ENST00000557280 FAM189BP81408 668 aa23.03■■□□□ 1.28
SEC23A-213ENST00000557280 SMAD3P84022 425 aaKnown RBP23.03■■□□□ 1.28
SEC23A-213ENST00000557280 COASYQ13057 564 aa23.03■■□□□ 1.28
SEC23A-213ENST00000557280 PRPF4BQ13523 1007 aaKnown RBP23.03■■□□□ 1.28
SEC23A-213ENST00000557280 EEF1DP3Q658K8 133 aa23.03■■□□□ 1.28
SEC23A-213ENST00000557280 HAUS6Q7Z4H7 955 aa23.03■■□□□ 1.28
SEC23A-213ENST00000557280 ECHDC2Q86YB7 292 aa23.03■■□□□ 1.28
SEC23A-213ENST00000557280 FAM178BQ8IXR5 827 aa23.03■■□□□ 1.28
SEC23A-213ENST00000557280 PRIMPOLQ96LW4 560 aa23.03■■□□□ 1.28
SEC23A-213ENST00000557280 PDZD7Q9H5P4 517 aa23.03■■□□□ 1.28
SEC23A-213ENST00000557280 TMEM134Q9H6X4 195 aa23.03■■□□□ 1.28
SEC23A-213ENST00000557280 USP25Q9UHP3 1055 aa23.03■■□□□ 1.28
SEC23A-213ENST00000557280 MEIS3P2A8K0S8 358 aa23.02■■□□□ 1.28
SEC23A-213ENST00000557280 PRPF40AO75400 957 aaKnown RBP23.02■■□□□ 1.28
SEC23A-213ENST00000557280 NR1I2O75469 434 aa23.02■■□□□ 1.28
SEC23A-213ENST00000557280 AXLP30530 894 aa23.02■■□□□ 1.28
SEC23A-213ENST00000557280 CASP5P51878 434 aa23.02■■□□□ 1.28
SEC23A-213ENST00000557280 AMPD3Q01432 767 aa23.02■■□□□ 1.28
SEC23A-213ENST00000557280 FAM160A1Q05DH4 1040 aa23.02■■□□□ 1.28
SEC23A-213ENST00000557280 ZC2HC1CQ53FD0 456 aaPredicted RBP23.02■■□□□ 1.28
SEC23A-213ENST00000557280 NOTUMQ6P988 496 aa23.02■■□□□ 1.28
SEC23A-213ENST00000557280 ZNF598Q86UK7 904 aaKnown RBP23.02■■□□□ 1.28
SEC23A-213ENST00000557280 NPAS4Q8IUM7 802 aa23.02■■□□□ 1.28
SEC23A-213ENST00000557280 CNNM3Q8NE01 707 aa23.02■■□□□ 1.28
SEC23A-213ENST00000557280 GLIS3Q8NEA6 775 aa23.02■■□□□ 1.28
SEC23A-213ENST00000557280 LRRC27Q9C0I9 530 aa23.02■■□□□ 1.28
SEC23A-213ENST00000557280 RC3H2Q9HBD1 1191 aaKnown RBP23.02■■□□□ 1.28
SEC23A-213ENST00000557280 FAM105AQ9NUU6 356 aa23.02■■□□□ 1.28
SEC23A-213ENST00000557280 RNF19AQ9NV58 838 aa23.02■■□□□ 1.28
SEC23A-213ENST00000557280 DACT1Q9NYF0 836 aa23.02■■□□□ 1.28
SEC23A-213ENST00000557280 A0A0U1RQF3 1178 aa23.01■■□□□ 1.27
SEC23A-213ENST00000557280 A0A1B0GUA9 196 aa23.01■■□□□ 1.27
SEC23A-213ENST00000557280 TLL1O43897 1013 aa23.01■■□□□ 1.27
SEC23A-213ENST00000557280 FGFR1P11362 822 aa23.01■■□□□ 1.27
SEC23A-213ENST00000557280 GAP43P17677 238 aa23.01■■□□□ 1.27
SEC23A-213ENST00000557280 HTRA4P83105 476 aaPredicted RBP23.01■■□□□ 1.27
SEC23A-213ENST00000557280 HERC4Q5GLZ8 1057 aaPredicted RBP23.01■■□□□ 1.27
SEC23A-213ENST00000557280 CCDC65Q8IXS2 484 aa23.01■■□□□ 1.27
SEC23A-213ENST00000557280 RNF169Q8NCN4 708 aa23.01■■□□□ 1.27
SEC23A-213ENST00000557280 LPPQ93052 612 aa23.01■■□□□ 1.27
SEC23A-213ENST00000557280 ZBED2Q9BTP6 218 aa23.01■■□□□ 1.27
SEC23A-213ENST00000557280 TARS2Q9BW92 718 aaKnown RBP23.01■■□□□ 1.27
SEC23A-213ENST00000557280 TRAIPQ9BWF2 469 aa23.01■■□□□ 1.27
SEC23A-213ENST00000557280 NKX2-4Q9H2Z4 354 aa23.01■■□□□ 1.27
SEC23A-213ENST00000557280 KLRC4O43908 158 aa23■■□□□ 1.27
SEC23A-213ENST00000557280 NPTXRO95502 500 aa23■■□□□ 1.27
SEC23A-213ENST00000557280 CA3P07451 260 aa23■■□□□ 1.27
SEC23A-213ENST00000557280 MYBP10242 640 aa23■■□□□ 1.27
SEC23A-213ENST00000557280 DNAJB2P25686 324 aa23■■□□□ 1.27
SEC23A-213ENST00000557280 FAM43BQ6ZT52 329 aaPredicted RBP23■■□□□ 1.27
SEC23A-213ENST00000557280 SPRED2Q7Z698 418 aa23■■□□□ 1.27
SEC23A-213ENST00000557280 SMG8Q8ND04 991 aaKnown RBP23■■□□□ 1.27
SEC23A-213ENST00000557280 IKZF4Q9H2S9 585 aa23■■□□□ 1.27
SEC23A-213ENST00000557280 MRPL44Q9H9J2 332 aaKnown RBP23■■□□□ 1.27
SEC23A-213ENST00000557280 TMEM161AQ9NX61 479 aa23■■□□□ 1.27
SEC23A-213ENST00000557280 SEL1LQ9UBV2 794 aa23■■□□□ 1.27
SEC23A-213ENST00000557280 TBX20Q9UMR3 447 aa23■■□□□ 1.27
SEC23A-213ENST00000557280 HES2Q9Y543 173 aa23■■□□□ 1.27
SEC23A-213ENST00000557280 PCDHB7Q9Y5E2 793 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms