RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 UBXN11Q5T124 520 aa12□□□□□ -0.49
HNRNPC-230ENST00000557201 RARS2Q5T160 578 aaKnown RBP12□□□□□ -0.49
HNRNPC-230ENST00000557201 PLA2G4FQ68DD2 849 aa12□□□□□ -0.49
HNRNPC-230ENST00000557201 GLB1LQ6UWU2 654 aa12□□□□□ -0.49
HNRNPC-230ENST00000557201 AGMOQ6ZNB7 445 aa12□□□□□ -0.49
HNRNPC-230ENST00000557201 ZNF280BQ86YH2 543 aa12□□□□□ -0.49
HNRNPC-230ENST00000557201 ZNF579Q8NAF0 562 aaKnown RBP12□□□□□ -0.49
HNRNPC-230ENST00000557201 DHX33Q9H6R0 707 aaKnown RBP12□□□□□ -0.49
HNRNPC-230ENST00000557201 MINDY3Q9H8M7 445 aa12□□□□□ -0.49
HNRNPC-230ENST00000557201 RTN4Q9NQC3 1192 aaKnown RBP12□□□□□ -0.49
HNRNPC-230ENST00000557201 CYP26B1Q9NR63 512 aa12□□□□□ -0.49
HNRNPC-230ENST00000557201 TSHZ2Q9NRE2 1034 aa12□□□□□ -0.49
HNRNPC-230ENST00000557201 AGPAT5Q9NUQ2 364 aa12□□□□□ -0.49
HNRNPC-230ENST00000557201 DDX25Q9UHL0 483 aaKnown RBP12□□□□□ -0.49
HNRNPC-230ENST00000557201 USTQ9Y2C2 406 aa12□□□□□ -0.49
HNRNPC-230ENST00000557201 PCDHB2Q9Y5E7 798 aa12□□□□□ -0.49
HNRNPC-230ENST00000557201 DMDP11532 3685 aa11.99□□□□□ -0.49
HNRNPC-230ENST00000557201 CDKL5O76039 1030 aa11.99□□□□□ -0.49
HNRNPC-230ENST00000557201 DDHD2O94830 711 aa11.99□□□□□ -0.49
HNRNPC-230ENST00000557201 LARGE1O95461 756 aa11.99□□□□□ -0.49
HNRNPC-230ENST00000557201 QARSP47897 775 aaKnown RBP11.99□□□□□ -0.49
HNRNPC-230ENST00000557201 NPEPPSP55786 919 aa11.99□□□□□ -0.49
HNRNPC-230ENST00000557201 BMS1Q14692 1282 aaKnown RBP11.99□□□□□ -0.49
HNRNPC-230ENST00000557201 NONOQ15233 471 aaKnown RBP eCLIP11.99□□□□□ -0.498e-7■□□□□ 9.3
HNRNPC-230ENST00000557201 INF2Q27J81 1249 aa11.99□□□□□ -0.49
HNRNPC-230ENST00000557201 CATSPER4Q7RTX7 472 aa11.99□□□□□ -0.49
HNRNPC-230ENST00000557201 NECAB1Q8N987 351 aa11.99□□□□□ -0.49
HNRNPC-230ENST00000557201 SPOCK2Q92563 424 aa11.99□□□□□ -0.49
HNRNPC-230ENST00000557201 SNX21Q969T3 373 aa11.99□□□□□ -0.49
HNRNPC-230ENST00000557201 TMX3Q96JJ7 454 aa11.99□□□□□ -0.49
HNRNPC-230ENST00000557201 FAM20AQ96MK3 541 aa11.99□□□□□ -0.49
HNRNPC-230ENST00000557201 NLRP4Q96MN2 994 aa11.99□□□□□ -0.49
HNRNPC-230ENST00000557201 JPH2Q9BR39 696 aaPredicted RBP11.99□□□□□ -0.49
HNRNPC-230ENST00000557201 FAM86C1Q9NVL1 165 aa11.99□□□□□ -0.49
HNRNPC-230ENST00000557201 INPP5FQ9Y2H2 1132 aa11.99□□□□□ -0.49
HNRNPC-230ENST00000557201 COL4A3BPQ9Y5P4 624 aa11.99□□□□□ -0.49
HNRNPC-230ENST00000557201 DENND4AQ7Z401 1863 aa11.99□□□□□ -0.49
HNRNPC-230ENST00000557201 INPPL1O15357 1258 aa11.98□□□□□ -0.49
HNRNPC-230ENST00000557201 GALR2O43603 387 aaPredicted RBP11.98□□□□□ -0.49
HNRNPC-230ENST00000557201 CTDNEP1O95476 244 aa11.98□□□□□ -0.49
HNRNPC-230ENST00000557201 EFEMP2O95967 443 aa11.98□□□□□ -0.49
HNRNPC-230ENST00000557201 ASGR2P07307 311 aa11.98□□□□□ -0.49
HNRNPC-230ENST00000557201 ATAT1Q5SQI0 421 aa11.98□□□□□ -0.49
HNRNPC-230ENST00000557201 PPP4R3AQ6IN85 833 aa11.98□□□□□ -0.49
HNRNPC-230ENST00000557201 KRT25Q7Z3Z0 450 aa11.98□□□□□ -0.49
HNRNPC-230ENST00000557201 SRGAP1Q7Z6B7 1085 aa11.98□□□□□ -0.49
HNRNPC-230ENST00000557201 GPR149Q86SP6 731 aa11.98□□□□□ -0.49
HNRNPC-230ENST00000557201 ZBTB33Q86T24 672 aa11.98□□□□□ -0.49
HNRNPC-230ENST00000557201 TMEM105Q8N8V8 129 aa11.98□□□□□ -0.49
HNRNPC-230ENST00000557201 TDRD5Q8NAT2 981 aaKnown RBP11.98□□□□□ -0.49
HNRNPC-230ENST00000557201 PRPF31Q8WWY3 499 aaKnown RBP11.98□□□□□ -0.49
HNRNPC-230ENST00000557201 HAS1Q92839 578 aa11.98□□□□□ -0.49
HNRNPC-230ENST00000557201 KLHL5Q96PQ7 755 aa11.98□□□□□ -0.49
HNRNPC-230ENST00000557201 LLPHQ9BRT6 129 aaKnown RBP11.98□□□□□ -0.49
HNRNPC-230ENST00000557201 PHF20Q9BVI0 1012 aa11.98□□□□□ -0.49
HNRNPC-230ENST00000557201 IRF2BPLQ9H1B7 796 aa11.98□□□□□ -0.49
HNRNPC-230ENST00000557201 KCNJ14Q9UNX9 436 aa11.98□□□□□ -0.49
HNRNPC-230ENST00000557201 PPME1Q9Y570 386 aa11.98□□□□□ -0.49
HNRNPC-230ENST00000557201 MYO10Q9HD67 2058 aa11.98□□□□□ -0.49
HNRNPC-230ENST00000557201 PLXNA3P51805 1871 aa11.97□□□□□ -0.49
HNRNPC-230ENST00000557201 CACNA1HO95180 2353 aa11.97□□□□□ -0.49
HNRNPC-230ENST00000557201 PROB1E7EW31 1015 aa11.97□□□□□ -0.49
HNRNPC-230ENST00000557201 P4HBP07237 508 aaKnown RBP11.97□□□□□ -0.49
HNRNPC-230ENST00000557201 CNPP09543 421 aaKnown RBP11.97□□□□□ -0.49
HNRNPC-230ENST00000557201 CLCN4P51793 760 aa11.97□□□□□ -0.49
HNRNPC-230ENST00000557201 SPIRE1Q08AE8 756 aa11.97□□□□□ -0.49
HNRNPC-230ENST00000557201 LAMTOR4Q0VGL1 99 aa11.97□□□□□ -0.49
HNRNPC-230ENST00000557201 ST3GAL1Q11201 340 aa11.97□□□□□ -0.49
HNRNPC-230ENST00000557201 LETM2Q2VYF4 491 aa11.97□□□□□ -0.49
HNRNPC-230ENST00000557201 PPFIBP1Q86W92 1011 aa11.97□□□□□ -0.49
HNRNPC-230ENST00000557201 C4orf19Q8IY42 314 aa11.97□□□□□ -0.49
HNRNPC-230ENST00000557201 RNF168Q8IYW5 571 aaPredicted RBP11.97□□□□□ -0.49
HNRNPC-230ENST00000557201 SLC7A3Q8WY07 619 aa11.97□□□□□ -0.49
HNRNPC-230ENST00000557201 TMEM143Q96AN5 459 aa11.97□□□□□ -0.49
HNRNPC-230ENST00000557201 PGBD4Q96DM1 585 aa11.97□□□□□ -0.49
HNRNPC-230ENST00000557201 TMEM175Q9BSA9 504 aa11.97□□□□□ -0.49
HNRNPC-230ENST00000557201 RSAD1Q9HA92 442 aa11.97□□□□□ -0.49
HNRNPC-230ENST00000557201 LIMD1Q9UGP4 676 aa11.97□□□□□ -0.49
HNRNPC-230ENST00000557201 STK36Q9NRP7 1315 aa11.97□□□□□ -0.49
HNRNPC-230ENST00000557201 CNTNAP2Q9UHC6 1331 aa11.97□□□□□ -0.49
HNRNPC-230ENST00000557201 H0Y858 1186 aa11.96□□□□□ -0.49
HNRNPC-230ENST00000557201 TBX3O15119 743 aa11.96□□□□□ -0.49
HNRNPC-230ENST00000557201 GFRA3O60609 400 aa11.96□□□□□ -0.49
HNRNPC-230ENST00000557201 PAPLNO95428 1278 aa11.96□□□□□ -0.49
HNRNPC-230ENST00000557201 GCFC2P16383 781 aaKnown RBP11.96□□□□□ -0.49
HNRNPC-230ENST00000557201 NCLP19338 710 aaKnown RBP11.96□□□□□ -0.49
HNRNPC-230ENST00000557201 CA8P35219 290 aa11.96□□□□□ -0.49
HNRNPC-230ENST00000557201 RFC5P40937 340 aa11.96□□□□□ -0.49
HNRNPC-230ENST00000557201 RNASELQ05823 741 aaKnown RBP11.96□□□□□ -0.49
HNRNPC-230ENST00000557201 EPHA7Q15375 998 aa11.96□□□□□ -0.49
HNRNPC-230ENST00000557201 TMC5Q6UXY8 1006 aa11.96□□□□□ -0.49
HNRNPC-230ENST00000557201 NEK8Q86SG6 692 aa11.96□□□□□ -0.49
HNRNPC-230ENST00000557201 FERMT3Q86UX7 667 aa11.96□□□□□ -0.49
HNRNPC-230ENST00000557201 CABP7Q86V35 215 aa11.96□□□□□ -0.49
HNRNPC-230ENST00000557201 EXOC8Q8IYI6 725 aa11.96□□□□□ -0.49
HNRNPC-230ENST00000557201 SMG8Q8ND04 991 aaKnown RBP11.96□□□□□ -0.49
HNRNPC-230ENST00000557201 NSUN7Q8NE18 718 aaKnown RBP11.96□□□□□ -0.49
HNRNPC-230ENST00000557201 OXER1Q8TDS5 423 aa11.96□□□□□ -0.49
HNRNPC-230ENST00000557201 PSPC1Q8WXF1 523 aaKnown RBP11.96□□□□□ -0.49
HNRNPC-230ENST00000557201 ATOH1Q92858 354 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms