RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 SLC16A4O15374 487 aa18.85■□□□□ 0.61
PSEN1-217ENST00000556533 HOXA2O43364 376 aa18.85■□□□□ 0.61
PSEN1-217ENST00000556533 PRKCBP05771 671 aa18.85■□□□□ 0.61
PSEN1-217ENST00000556533 CTNNB1P35222 781 aa18.85■□□□□ 0.61
PSEN1-217ENST00000556533 RAB27AP51159 221 aa18.85■□□□□ 0.61
PSEN1-217ENST00000556533 EFNA5P52803 228 aa18.85■□□□□ 0.61
PSEN1-217ENST00000556533 KRT85P78386 507 aa18.85■□□□□ 0.61
PSEN1-217ENST00000556533 EPC2Q52LR7 807 aa18.85■□□□□ 0.61
PSEN1-217ENST00000556533 UBXN11Q5T124 520 aa18.85■□□□□ 0.61
PSEN1-217ENST00000556533 SV2BQ7L1I2 683 aa18.85■□□□□ 0.61
PSEN1-217ENST00000556533 ZNF598Q86UK7 904 aaKnown RBP18.85■□□□□ 0.61
PSEN1-217ENST00000556533 SPATA32Q96LK8 384 aa18.85■□□□□ 0.61
PSEN1-217ENST00000556533 REEP2Q9BRK0 252 aa18.85■□□□□ 0.61
PSEN1-217ENST00000556533 EIF2AQ9BY44 585 aaKnown RBP18.85■□□□□ 0.61
PSEN1-217ENST00000556533 TRIM6Q9C030 488 aaPredicted RBP18.85■□□□□ 0.61
PSEN1-217ENST00000556533 FZD8Q9H461 694 aa18.85■□□□□ 0.61
PSEN1-217ENST00000556533 STK17AQ9UEE5 414 aa18.85■□□□□ 0.61
PSEN1-217ENST00000556533 STXBP5LQ9Y2K9 1186 aa18.85■□□□□ 0.61
PSEN1-217ENST00000556533 PTPRSQ13332 1948 aa18.84■□□□□ 0.61
PSEN1-217ENST00000556533 LOXHD1Q8IVV2 1947 aa18.84■□□□□ 0.61
PSEN1-217ENST00000556533 FAM13AO94988 1023 aa18.84■□□□□ 0.61
PSEN1-217ENST00000556533 NPTXRO95502 500 aa18.84■□□□□ 0.61
PSEN1-217ENST00000556533 PLS3P13797 630 aa18.84■□□□□ 0.61
PSEN1-217ENST00000556533 ATF7P17544 494 aaPredicted RBP18.84■□□□□ 0.61
PSEN1-217ENST00000556533 NUCB2P80303 420 aa18.84■□□□□ 0.61
PSEN1-217ENST00000556533 ADGRE1Q14246 886 aa18.84■□□□□ 0.61
PSEN1-217ENST00000556533 CLLU1OSQ5K130 101 aa18.84■□□□□ 0.61
PSEN1-217ENST00000556533 AXDND1Q5T1B0 1012 aaPredicted RBP18.84■□□□□ 0.61
PSEN1-217ENST00000556533 SHC4Q6S5L8 630 aa18.84■□□□□ 0.61
PSEN1-217ENST00000556533 MICALL1Q8N3F8 863 aa18.84■□□□□ 0.61
PSEN1-217ENST00000556533 MYCT1Q8N699 235 aa18.84■□□□□ 0.61
PSEN1-217ENST00000556533 GDPD5Q8WTR4 605 aa18.84■□□□□ 0.61
PSEN1-217ENST00000556533 PPM1EQ8WY54 764 aa18.84■□□□□ 0.61
PSEN1-217ENST00000556533 PGBD4Q96DM1 585 aa18.84■□□□□ 0.61
PSEN1-217ENST00000556533 CASD1Q96PB1 797 aa18.84■□□□□ 0.61
PSEN1-217ENST00000556533 TRAIPQ9BWF2 469 aa18.84■□□□□ 0.61
PSEN1-217ENST00000556533 APOL6Q9BWW8 343 aa18.84■□□□□ 0.61
PSEN1-217ENST00000556533 TMEM117Q9H0C3 514 aa18.84■□□□□ 0.61
PSEN1-217ENST00000556533 RNF19AQ9NV58 838 aa18.84■□□□□ 0.61
PSEN1-217ENST00000556533 TYW1Q9NV66 732 aaKnown RBP18.84■□□□□ 0.61
PSEN1-217ENST00000556533 INPP5FQ9Y2H2 1132 aa18.84■□□□□ 0.61
PSEN1-217ENST00000556533 TTLL13PA6NNM8 815 aa18.83■□□□□ 0.6
PSEN1-217ENST00000556533 MEIS3P2A8K0S8 358 aa18.83■□□□□ 0.6
PSEN1-217ENST00000556533 ZNF623O75123 536 aa18.83■□□□□ 0.6
PSEN1-217ENST00000556533 TBCAO75347 108 aaKnown RBP18.83■□□□□ 0.6
PSEN1-217ENST00000556533 SLC34A2O95436 690 aa18.83■□□□□ 0.6
PSEN1-217ENST00000556533 BMPR1AP36894 532 aa18.83■□□□□ 0.6
PSEN1-217ENST00000556533 ANP32AP39687 249 aaKnown RBP18.83■□□□□ 0.6
PSEN1-217ENST00000556533 SMTNP53814 917 aa18.83■□□□□ 0.6
PSEN1-217ENST00000556533 GIT2Q14161 759 aa18.83■□□□□ 0.6
PSEN1-217ENST00000556533 NAALADL2Q58DX5 795 aa18.83■□□□□ 0.6
PSEN1-217ENST00000556533 PPP4R3CPQ6ZMV5 832 aa18.83■□□□□ 0.6
PSEN1-217ENST00000556533 DYMQ7RTS9 669 aa18.83■□□□□ 0.6
PSEN1-217ENST00000556533 LEO1Q8WVC0 666 aaPredicted RBP18.83■□□□□ 0.6
PSEN1-217ENST00000556533 CCDC51Q96ER9 411 aa18.83■□□□□ 0.6
PSEN1-217ENST00000556533 PRIMPOLQ96LW4 560 aa18.83■□□□□ 0.6
PSEN1-217ENST00000556533 SAMD11Q96NU1 681 aa18.83■□□□□ 0.6
PSEN1-217ENST00000556533 CCDC113Q9H0I3 377 aa18.83■□□□□ 0.6
PSEN1-217ENST00000556533 C17orf75Q9HAS0 396 aa18.83■□□□□ 0.6
PSEN1-217ENST00000556533 FAM13BQ9NYF5 915 aa18.83■□□□□ 0.6
PSEN1-217ENST00000556533 HCSTQ9UBK5 93 aa18.83■□□□□ 0.6
PSEN1-217ENST00000556533 KCNG1Q9UIX4 513 aa18.83■□□□□ 0.6
PSEN1-217ENST00000556533 RBM19Q9Y4C8 960 aaKnown RBP18.83■□□□□ 0.6
PSEN1-217ENST00000556533 GBF1Q92538 1859 aa18.82■□□□□ 0.6
PSEN1-217ENST00000556533 A0A1B0GUA9 196 aa18.82■□□□□ 0.6
PSEN1-217ENST00000556533 ACKR2O00590 384 aa18.82■□□□□ 0.6
PSEN1-217ENST00000556533 GTPBP6O43824 516 aaPredicted RBP18.82■□□□□ 0.6
PSEN1-217ENST00000556533 ITGA4P13612 1032 aa18.82■□□□□ 0.6
PSEN1-217ENST00000556533 GPM6BQ13491 265 aa18.82■□□□□ 0.6
PSEN1-217ENST00000556533 CCDC85BQ15834 202 aaPredicted RBP18.82■□□□□ 0.6
PSEN1-217ENST00000556533 FAM187BQ17R55 369 aa18.82■□□□□ 0.6
PSEN1-217ENST00000556533 SLC27A1Q6PCB7 646 aa18.82■□□□□ 0.6
PSEN1-217ENST00000556533 GLB1LQ6UWU2 654 aa18.82■□□□□ 0.6
PSEN1-217ENST00000556533 MRPL10Q7Z7H8 261 aaKnown RBP18.82■□□□□ 0.6
PSEN1-217ENST00000556533 SMG8Q8ND04 991 aaKnown RBP18.82■□□□□ 0.6
PSEN1-217ENST00000556533 DHX58Q96C10 678 aa18.82■□□□□ 0.6
PSEN1-217ENST00000556533 LARSQ9P2J5 1176 aaKnown RBP18.82■□□□□ 0.6
PSEN1-217ENST00000556533 ODF2LQ9ULJ1 636 aa18.82■□□□□ 0.6
PSEN1-217ENST00000556533 HES2Q9Y543 173 aa18.82■□□□□ 0.6
PSEN1-217ENST00000556533 IPPQ9Y573 584 aa18.82■□□□□ 0.6
PSEN1-217ENST00000556533 CNTNAP2Q9UHC6 1331 aa18.81■□□□□ 0.6
PSEN1-217ENST00000556533 N4BP3O15049 544 aa18.81■□□□□ 0.6
PSEN1-217ENST00000556533 EDN1P05305 212 aa18.81■□□□□ 0.6
PSEN1-217ENST00000556533 STRN3Q13033 797 aa18.81■□□□□ 0.6
PSEN1-217ENST00000556533 NT5DC1Q5TFE4 455 aa18.81■□□□□ 0.6
PSEN1-217ENST00000556533 LRRC55Q6ZSA7 311 aa18.81■□□□□ 0.6
PSEN1-217ENST00000556533 CNNM3Q8NE01 707 aa18.81■□□□□ 0.6
PSEN1-217ENST00000556533 SPIRE2Q8WWL2 714 aa18.81■□□□□ 0.6
PSEN1-217ENST00000556533 STAMQ92783 540 aa18.81■□□□□ 0.6
PSEN1-217ENST00000556533 CLP1Q92989 425 aaKnown RBP18.81■□□□□ 0.6
PSEN1-217ENST00000556533 RNF39Q9H2S5 420 aa18.81■□□□□ 0.6
PSEN1-217ENST00000556533 PDZD7Q9H5P4 517 aa18.81■□□□□ 0.6
PSEN1-217ENST00000556533 PARVGQ9HBI0 331 aa18.81■□□□□ 0.6
PSEN1-217ENST00000556533 RWDD3Q9Y3V2 267 aa18.81■□□□□ 0.6
PSEN1-217ENST00000556533 TTC3P53804 2025 aa18.81■□□□□ 0.6
PSEN1-217ENST00000556533 MYMKA6NI61 221 aa18.8■□□□□ 0.6
PSEN1-217ENST00000556533 POLR2DO15514 142 aaKnown RBP18.8■□□□□ 0.6
PSEN1-217ENST00000556533 OFD1O75665 1012 aa18.8■□□□□ 0.6
PSEN1-217ENST00000556533 CSPG5O95196 566 aa18.8■□□□□ 0.6
PSEN1-217ENST00000556533 ATF7IP2Q5U623 682 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms