RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 SDR42E1Q8WUS8 393 aa5.76□□□□□ -1.49
ATXN3-239ENST00000556315 ISL2Q96A47 359 aa5.76□□□□□ -1.49
ATXN3-239ENST00000556315 HRASLS5Q96KN8 279 aa5.76□□□□□ -1.49
ATXN3-239ENST00000556315 RHOVQ96L33 236 aa5.76□□□□□ -1.49
ATXN3-239ENST00000556315 FGD4Q96M96 766 aa5.76□□□□□ -1.49
ATXN3-239ENST00000556315 FTOQ9C0B1 505 aaKnown RBP eCLIP5.76□□□□□ -1.49
ATXN3-239ENST00000556315 TGIF2Q9GZN2 237 aa5.76□□□□□ -1.49
ATXN3-239ENST00000556315 TNKS2Q9H2K2 1166 aa5.76□□□□□ -1.49
ATXN3-239ENST00000556315 UBE2ZQ9H832 354 aaPredicted RBP5.76□□□□□ -1.49
ATXN3-239ENST00000556315 TLR6Q9Y2C9 796 aa5.76□□□□□ -1.49
ATXN3-239ENST00000556315 ASTN1O14525 1302 aa5.75□□□□□ -1.49
ATXN3-239ENST00000556315 ZNF532Q9HCE3 1301 aa5.75□□□□□ -1.49
ATXN3-239ENST00000556315 DCXO43602 365 aa5.75□□□□□ -1.49
ATXN3-239ENST00000556315 BCAR3O75815 825 aa5.75□□□□□ -1.49
ATXN3-239ENST00000556315 BAIAP3O94812 1187 aa5.75□□□□□ -1.49
ATXN3-239ENST00000556315 PF4P02776 101 aa5.75□□□□□ -1.49
ATXN3-239ENST00000556315 IQCF3P0C7M6 154 aa5.75□□□□□ -1.49
ATXN3-239ENST00000556315 CYP2C9P11712 490 aa5.75□□□□□ -1.49
ATXN3-239ENST00000556315 TFE3P19532 575 aaPredicted RBP5.75□□□□□ -1.49
ATXN3-239ENST00000556315 EIF4A3P38919 411 aaKnown RBP5.75□□□□□ -1.49
ATXN3-239ENST00000556315 PSMC6P62333 389 aa5.75□□□□□ -1.49
ATXN3-239ENST00000556315 CAMK2GQ13555 558 aaPredicted RBP5.75□□□□□ -1.49
ATXN3-239ENST00000556315 SNAP47Q5SQN1 464 aa5.75□□□□□ -1.49
ATXN3-239ENST00000556315 C16orf86Q6ZW13 317 aa5.75□□□□□ -1.49
ATXN3-239ENST00000556315 LCORLQ8N3X6 602 aa5.75□□□□□ -1.49
ATXN3-239ENST00000556315 FAM133AQ8N9E0 248 aa5.75□□□□□ -1.49
ATXN3-239ENST00000556315 LRRN4CLQ8ND94 238 aa5.75□□□□□ -1.49
ATXN3-239ENST00000556315 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.75□□□□□ -1.49
ATXN3-239ENST00000556315 PI4K2BQ8TCG2 481 aa5.75□□□□□ -1.49
ATXN3-239ENST00000556315 TMEM40Q8WWA1 233 aa5.75□□□□□ -1.49
ATXN3-239ENST00000556315 FAM168AQ92567 244 aa5.75□□□□□ -1.49
ATXN3-239ENST00000556315 NUP88Q99567 741 aaPredicted RBP5.75□□□□□ -1.49
ATXN3-239ENST00000556315 CCSER2Q9H7U1 834 aa5.75□□□□□ -1.49
ATXN3-239ENST00000556315 SLC38A10Q9HBR0 1119 aa5.75□□□□□ -1.49
ATXN3-239ENST00000556315 RAVER2Q9HCJ3 691 aaKnown RBP5.75□□□□□ -1.49
ATXN3-239ENST00000556315 TRMT13Q9NUP7 481 aaKnown RBP5.75□□□□□ -1.49
ATXN3-239ENST00000556315 NYAP2Q9P242 653 aa5.75□□□□□ -1.49
ATXN3-239ENST00000556315 DDX41Q9UJV9 622 aaKnown RBP5.75□□□□□ -1.49
ATXN3-239ENST00000556315 FEM1BQ9UK73 627 aa5.75□□□□□ -1.49
ATXN3-239ENST00000556315 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.75□□□□□ -1.49
ATXN3-239ENST00000556315 SUPT16HQ9Y5B9 1047 aaKnown RBP5.75□□□□□ -1.49
ATXN3-239ENST00000556315 SNX11Q9Y5W9 270 aa5.75□□□□□ -1.49
ATXN3-239ENST00000556315 ZNF236Q9UL36 1845 aa5.75□□□□□ -1.49
ATXN3-239ENST00000556315 MYH13Q9UKX3 1938 aa5.75□□□□□ -1.49
ATXN3-239ENST00000556315 TNKSO95271 1327 aa5.74□□□□□ -1.49
ATXN3-239ENST00000556315 TCRBV5S4A2TA0A5A2 114 aa5.74□□□□□ -1.49
ATXN3-239ENST00000556315 PRKAB2O43741 272 aa5.74□□□□□ -1.49
ATXN3-239ENST00000556315 KPNA6O60684 536 aa5.74□□□□□ -1.49
ATXN3-239ENST00000556315 NDUFB10O96000 172 aa5.74□□□□□ -1.49
ATXN3-239ENST00000556315 TRIM27P14373 513 aa5.74□□□□□ -1.49
ATXN3-239ENST00000556315 IL9P15248 144 aa5.74□□□□□ -1.49
ATXN3-239ENST00000556315 KCNA5P22460 613 aa5.74□□□□□ -1.49
ATXN3-239ENST00000556315 KCNJ6P48051 423 aa5.74□□□□□ -1.49
ATXN3-239ENST00000556315 ERVK-21P61565 698 aa5.74□□□□□ -1.49
ATXN3-239ENST00000556315 CNTN2Q02246 1040 aa5.74□□□□□ -1.49
ATXN3-239ENST00000556315 PTPN11Q06124 597 aaPredicted RBP5.74□□□□□ -1.49
ATXN3-239ENST00000556315 BFSP2Q13515 415 aa5.74□□□□□ -1.49
ATXN3-239ENST00000556315 TKFCQ3LXA3 575 aa5.74□□□□□ -1.49
ATXN3-239ENST00000556315 DUSP28Q4G0W2 176 aa5.74□□□□□ -1.49
ATXN3-239ENST00000556315 ZNF394Q53GI3 561 aa5.74□□□□□ -1.49
ATXN3-239ENST00000556315 BRDTQ58F21 947 aaPredicted RBP5.74□□□□□ -1.49
ATXN3-239ENST00000556315 TAPT1Q6NXT6 567 aa5.74□□□□□ -1.49
ATXN3-239ENST00000556315 AACSQ86V21 672 aa5.74□□□□□ -1.49
ATXN3-239ENST00000556315 GPBAR1Q8TDU6 330 aa5.74□□□□□ -1.49
ATXN3-239ENST00000556315 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.74□□□□□ -1.49
ATXN3-239ENST00000556315 MKL1Q969V6 931 aa5.74□□□□□ -1.49
ATXN3-239ENST00000556315 HEXIM2Q96MH2 286 aaKnown RBP5.74□□□□□ -1.49
ATXN3-239ENST00000556315 TGS1Q96RS0 853 aaKnown RBP5.74□□□□□ -1.49
ATXN3-239ENST00000556315 RAD9AQ99638 391 aa5.74□□□□□ -1.49
ATXN3-239ENST00000556315 MTG1Q9BT17 334 aaPredicted RBP5.74□□□□□ -1.49
ATXN3-239ENST00000556315 SPON2Q9BUD6 331 aa5.74□□□□□ -1.49
ATXN3-239ENST00000556315 UPF3BQ9BZI7 483 aaKnown RBP5.74□□□□□ -1.49
ATXN3-239ENST00000556315 ACAD9Q9H845 621 aa5.74□□□□□ -1.49
ATXN3-239ENST00000556315 ARMT1Q9H993 441 aa5.74□□□□□ -1.49
ATXN3-239ENST00000556315 PDGFCQ9NRA1 345 aa5.74□□□□□ -1.49
ATXN3-239ENST00000556315 PRKAG3Q9UGI9 489 aa5.74□□□□□ -1.49
ATXN3-239ENST00000556315 CTNNA3Q9UI47 895 aa5.74□□□□□ -1.49
ATXN3-239ENST00000556315 FAM50BQ9Y247 325 aa5.74□□□□□ -1.49
ATXN3-239ENST00000556315 PCDHB5Q9Y5E4 795 aa5.74□□□□□ -1.49
ATXN3-239ENST00000556315 PCDHGB7Q9Y5F8 929 aa5.74□□□□□ -1.49
ATXN3-239ENST00000556315 SIPA1L1O43166 1804 aa5.74□□□□□ -1.49
ATXN3-239ENST00000556315 ZNF536O15090 1300 aa5.74□□□□□ -1.49
ATXN3-239ENST00000556315 BDP1A6H8Y1 2624 aa5.73□□□□□ -1.49
ATXN3-239ENST00000556315 CYP2D7A0A087X1C5 515 aa5.73□□□□□ -1.49
ATXN3-239ENST00000556315 GOLIM4O00461 696 aa5.73□□□□□ -1.49
ATXN3-239ENST00000556315 MBD4O95243 580 aa5.73□□□□□ -1.49
ATXN3-239ENST00000556315 PARNO95453 639 aaKnown RBP5.73□□□□□ -1.49
ATXN3-239ENST00000556315 MYL3P08590 195 aa5.73□□□□□ -1.49
ATXN3-239ENST00000556315 NTF4P34130 210 aa5.73□□□□□ -1.49
ATXN3-239ENST00000556315 CPT1AP50416 773 aa5.73□□□□□ -1.49
ATXN3-239ENST00000556315 RACK1P63244 317 aaKnown RBP5.73□□□□□ -1.49
ATXN3-239ENST00000556315 PURAQ00577 322 aaKnown RBP5.73□□□□□ -1.49
ATXN3-239ENST00000556315 FAM160A1Q05DH4 1040 aa5.73□□□□□ -1.49
ATXN3-239ENST00000556315 RAD51AP2Q09MP3 1159 aa5.73□□□□□ -1.49
ATXN3-239ENST00000556315 SEPT6Q14141 434 aa5.73□□□□□ -1.49
ATXN3-239ENST00000556315 PKN1Q16512 942 aa5.73□□□□□ -1.49
ATXN3-239ENST00000556315 LRRFIP1Q32MZ4 808 aaKnown RBP5.73□□□□□ -1.49
ATXN3-239ENST00000556315 FAM47CQ5HY64 1035 aa5.73□□□□□ -1.49
ATXN3-239ENST00000556315 NFRKBQ6P4R8 1299 aa5.73□□□□□ -1.49
ATXN3-239ENST00000556315 CTR9Q6PD62 1173 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms