RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 PRAMEF1O95521 474 aa5.47□□□□□ -1.53
ATXN3-237ENST00000556274 FGAP02671 866 aa5.47□□□□□ -1.53
ATXN3-237ENST00000556274 HSPD1P10809 573 aaKnown RBP5.47□□□□□ -1.53
ATXN3-237ENST00000556274 EEF2P13639 858 aaKnown RBP5.47□□□□□ -1.53
ATXN3-237ENST00000556274 ATP2B1P20020 1258 aa5.47□□□□□ -1.53
ATXN3-237ENST00000556274 BACE1P56817 501 aa5.47□□□□□ -1.53
ATXN3-237ENST00000556274 EGR3Q06889 387 aa5.47□□□□□ -1.53
ATXN3-237ENST00000556274 IKQ13123 557 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-237ENST00000556274 PLS1Q14651 629 aa5.47□□□□□ -1.53
ATXN3-237ENST00000556274 TCEAL1Q15170 157 aa5.47□□□□□ -1.53
ATXN3-237ENST00000556274 ZNF792Q3KQV3 632 aa5.47□□□□□ -1.53
ATXN3-237ENST00000556274 SBK1Q52WX2 424 aa5.47□□□□□ -1.53
ATXN3-237ENST00000556274 KIAA1211LQ6NV74 962 aa5.47□□□□□ -1.53
ATXN3-237ENST00000556274 GIMAP6Q6P9H5 292 aa5.47□□□□□ -1.53
ATXN3-237ENST00000556274 VHLLQ6RSH7 139 aa5.47□□□□□ -1.53
ATXN3-237ENST00000556274 CASC1Q6TDU7 716 aa5.47□□□□□ -1.53
ATXN3-237ENST00000556274 MFSD6Q6ZSS7 791 aa5.47□□□□□ -1.53
ATXN3-237ENST00000556274 TMEM179Q6ZVK1 233 aa5.47□□□□□ -1.53
ATXN3-237ENST00000556274 C16orf86Q6ZW13 317 aa5.47□□□□□ -1.53
ATXN3-237ENST00000556274 PRRT2Q7Z6L0 340 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-237ENST00000556274 ANKRD23Q86SG2 305 aa5.47□□□□□ -1.53
ATXN3-237ENST00000556274 ZNF589Q86UQ0 364 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-237ENST00000556274 SPICE1Q8N0Z3 855 aa5.47□□□□□ -1.53
ATXN3-237ENST00000556274 ANKRD13CQ8N6S4 541 aa5.47□□□□□ -1.53
ATXN3-237ENST00000556274 DAGLBQ8NCG7 672 aa5.47□□□□□ -1.53
ATXN3-237ENST00000556274 SYTL5Q8TDW5 730 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-237ENST00000556274 TCTN2Q96GX1 697 aa5.47□□□□□ -1.53
ATXN3-237ENST00000556274 ERO1AQ96HE7 468 aa5.47□□□□□ -1.53
ATXN3-237ENST00000556274 CCDC17Q96LX7 622 aa5.47□□□□□ -1.53
ATXN3-237ENST00000556274 P2RX7Q99572 595 aaKnown RBP5.47□□□□□ -1.53
ATXN3-237ENST00000556274 DNAJC18Q9H819 358 aa5.47□□□□□ -1.53
ATXN3-237ENST00000556274 CTNNA3Q9UI47 895 aa5.47□□□□□ -1.53
ATXN3-237ENST00000556274 ZNF451Q9Y4E5 1061 aa5.47□□□□□ -1.53
ATXN3-237ENST00000556274 TRIM17Q9Y577 477 aa5.47□□□□□ -1.53
ATXN3-237ENST00000556274 PCDHA11Q9Y5I1 949 aa5.47□□□□□ -1.53
ATXN3-237ENST00000556274 COL2A1P02458 1487 aaPredicted RBP5.46□□□□□ -1.53
ATXN3-237ENST00000556274 RFX7Q2KHR2 1363 aa5.46□□□□□ -1.54
ATXN3-237ENST00000556274 SSU72P8A0A1W2PR75 194 aa5.46□□□□□ -1.54
ATXN3-237ENST00000556274 TLR2O60603 784 aa5.46□□□□□ -1.54
ATXN3-237ENST00000556274 PEX10O60683 326 aa5.46□□□□□ -1.54
ATXN3-237ENST00000556274 STK10O94804 968 aaKnown RBP5.46□□□□□ -1.54
ATXN3-237ENST00000556274 GSPT1P15170 499 aaKnown RBP5.46□□□□□ -1.54
ATXN3-237ENST00000556274 CD247P20963 164 aa5.46□□□□□ -1.54
ATXN3-237ENST00000556274 CHMLP26374 656 aa5.46□□□□□ -1.54
ATXN3-237ENST00000556274 PSMC4P43686 418 aa5.46□□□□□ -1.54
ATXN3-237ENST00000556274 USP14P54578 494 aa5.46□□□□□ -1.54
ATXN3-237ENST00000556274 ICA1Q05084 483 aa5.46□□□□□ -1.54
ATXN3-237ENST00000556274 IMMTQ16891 758 aaKnown RBP5.46□□□□□ -1.54
ATXN3-237ENST00000556274 ANKRD39Q53RE8 183 aa5.46□□□□□ -1.54
ATXN3-237ENST00000556274 HEATR6Q6AI08 1181 aaKnown RBP5.46□□□□□ -1.54
ATXN3-237ENST00000556274 ANKS3Q6ZW76 656 aa5.46□□□□□ -1.54
ATXN3-237ENST00000556274 CTU1Q7Z7A3 348 aaKnown RBP5.46□□□□□ -1.54
ATXN3-237ENST00000556274 ZNF655Q8N720 491 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-237ENST00000556274 PARK7Q99497 189 aaKnown RBP5.46□□□□□ -1.54
ATXN3-237ENST00000556274 DSCC1Q9BVC3 393 aa5.46□□□□□ -1.54
ATXN3-237ENST00000556274 HDAC8Q9BY41 377 aa5.46□□□□□ -1.54
ATXN3-237ENST00000556274 MCOLN1Q9GZU1 580 aa5.46□□□□□ -1.54
ATXN3-237ENST00000556274 RPAP3Q9H6T3 665 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-237ENST00000556274 SH2D4AQ9H788 454 aa5.46□□□□□ -1.54
ATXN3-237ENST00000556274 KANSL2Q9H9L4 492 aa5.46□□□□□ -1.54
ATXN3-237ENST00000556274 EPB41L4AQ9HCS5 686 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-237ENST00000556274 MBNL3Q9NUK0 354 aaKnown RBP5.46□□□□□ -1.54
ATXN3-237ENST00000556274 SLAMF8Q9P0V8 285 aa5.46□□□□□ -1.54
ATXN3-237ENST00000556274 ADAMTS6Q9UKP5 1117 aa5.46□□□□□ -1.54
ATXN3-237ENST00000556274 STX8Q9UNK0 236 aa5.46□□□□□ -1.54
ATXN3-237ENST00000556274 AGTPBP1Q9UPW5 1226 aa5.46□□□□□ -1.54
ATXN3-237ENST00000556274 RLFQ13129 1914 aa5.45□□□□□ -1.54
ATXN3-237ENST00000556274 A0A1W2PRG0 241 aa5.45□□□□□ -1.54
ATXN3-237ENST00000556274 SHOXO15266 292 aa5.45□□□□□ -1.54
ATXN3-237ENST00000556274 NMT2O60551 498 aa5.45□□□□□ -1.54
ATXN3-237ENST00000556274 FLOT1O75955 427 aa5.45□□□□□ -1.54
ATXN3-237ENST00000556274 RNASE1P07998 156 aaKnown RBP5.45□□□□□ -1.54
ATXN3-237ENST00000556274 HOXD10P28358 340 aa5.45□□□□□ -1.54
ATXN3-237ENST00000556274 GUCY1A2P33402 732 aa5.45□□□□□ -1.54
ATXN3-237ENST00000556274 GTF2F1P35269 517 aaKnown RBP eCLIP5.45□□□□□ -1.54
ATXN3-237ENST00000556274 PTH1RQ03431 593 aa5.45□□□□□ -1.54
ATXN3-237ENST00000556274 GABPAQ06546 454 aa5.45□□□□□ -1.54
ATXN3-237ENST00000556274 TRDNQ13061 729 aa5.45□□□□□ -1.54
ATXN3-237ENST00000556274 ALX1Q15699 326 aa5.45□□□□□ -1.54
ATXN3-237ENST00000556274 FXNQ16595 210 aa5.45□□□□□ -1.54
ATXN3-237ENST00000556274 ADAT2Q7Z6V5 191 aaKnown RBP5.45□□□□□ -1.54
ATXN3-237ENST00000556274 RAET1EQ8TD07 263 aa5.45□□□□□ -1.54
ATXN3-237ENST00000556274 KLHL6Q8WZ60 621 aa5.45□□□□□ -1.54
ATXN3-237ENST00000556274 BRF1Q92994 677 aa5.45□□□□□ -1.54
ATXN3-237ENST00000556274 COA7Q96BR5 231 aa5.45□□□□□ -1.54
ATXN3-237ENST00000556274 NUP88Q99567 741 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-237ENST00000556274 ARHGAP39Q9C0H5 1083 aa5.45□□□□□ -1.54
ATXN3-237ENST00000556274 RC3H2Q9HBD1 1191 aaKnown RBP5.45□□□□□ -1.54
ATXN3-237ENST00000556274 GP6Q9HCN6 339 aa5.45□□□□□ -1.54
ATXN3-237ENST00000556274 HOXC10Q9NYD6 342 aa5.45□□□□□ -1.54
ATXN3-237ENST00000556274 PRR13Q9NZ81 148 aa5.45□□□□□ -1.54
ATXN3-237ENST00000556274 PCNTO95613 3336 aa5.45□□□□□ -1.54
ATXN3-237ENST00000556274 KAT6AQ92794 2004 aa5.45□□□□□ -1.54
ATXN3-237ENST00000556274 KIAA1217Q5T5P2 1943 aa5.44□□□□□ -1.54
ATXN3-237ENST00000556274 GREB1LQ9C091 1923 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-237ENST00000556274 B4E1Z4 1266 aa5.44□□□□□ -1.54
ATXN3-237ENST00000556274 F5H6K3 240 aa5.44□□□□□ -1.54
ATXN3-237ENST00000556274 TNPO2O14787 897 aaKnown RBP5.44□□□□□ -1.54
ATXN3-237ENST00000556274 PPM1BO75688 479 aa5.44□□□□□ -1.54
ATXN3-237ENST00000556274 DDAH1O94760 285 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 629.8 ms