RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 FAM193BQ96PV7 902 aaPredicted RBP8.68□□□□□ -1.02
PTCSC3-201ENST00000556013 MTMR9Q96QG7 549 aa8.68□□□□□ -1.02
PTCSC3-201ENST00000556013 MTRQ99707 1265 aa8.68□□□□□ -1.02
PTCSC3-201ENST00000556013 EIF2AK1Q9BQI3 630 aaKnown RBP8.68□□□□□ -1.02
PTCSC3-201ENST00000556013 SH2D3AQ9BRG2 576 aa8.68□□□□□ -1.02
PTCSC3-201ENST00000556013 RHOBTB2Q9BYZ6 727 aa8.68□□□□□ -1.02
PTCSC3-201ENST00000556013 IRF2BPLQ9H1B7 796 aa8.68□□□□□ -1.02
PTCSC3-201ENST00000556013 TTC12Q9H892 705 aaPredicted RBP8.68□□□□□ -1.02
PTCSC3-201ENST00000556013 RSAD1Q9HA92 442 aa8.68□□□□□ -1.02
PTCSC3-201ENST00000556013 RGL1Q9NZL6 768 aa8.68□□□□□ -1.02
PTCSC3-201ENST00000556013 WRAP73Q9P2S5 460 aaPredicted RBP8.68□□□□□ -1.02
PTCSC3-201ENST00000556013 HCSTQ9UBK5 93 aa8.68□□□□□ -1.02
PTCSC3-201ENST00000556013 DPP7Q9UHL4 492 aa8.68□□□□□ -1.02
PTCSC3-201ENST00000556013 FAN1Q9Y2M0 1017 aa8.68□□□□□ -1.02
PTCSC3-201ENST00000556013 PCDHGC5Q9Y5F6 944 aa8.68□□□□□ -1.02
PTCSC3-201ENST00000556013 MUC6Q6W4X9 2439 aa8.68□□□□□ -1.02
PTCSC3-201ENST00000556013 TMEM221A6NGB7 291 aa8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 BTBD18B2RXH4 712 aa8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 NT5C1B-RDH14C9J2C7 533 aa8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 M0R296 226 aa8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 LILRB3O75022 631 aa8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 TECTAO75443 2155 aa8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 CSPG5O95196 566 aa8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 ARL2P36404 184 aa8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 NEK4P51957 841 aa8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 RNASELQ05823 741 aaKnown RBP8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 TRIM29Q14134 588 aa8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 EMC2Q15006 297 aa8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 SAFBQ15424 915 aaKnown RBP eCLIP8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 CALCRLQ16602 461 aa8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 EARS2Q5JPH6 523 aaKnown RBP8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 UBXN11Q5T124 520 aa8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 PLA2G4FQ68DD2 849 aa8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 NOTUMQ6P988 496 aa8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 POTEDQ86YR6 584 aa8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 UBALD2Q8IYN6 164 aa8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 HACE1Q8IYU2 909 aa8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 ZDHHC14Q8IZN3 488 aa8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 ZNF579Q8NAF0 562 aaKnown RBP8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 RNF149Q8NC42 400 aa8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 NSUN7Q8NE18 718 aaKnown RBP8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 SLC22A17Q8WUG5 538 aa8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 HDAC7Q8WUI4 952 aa8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 TMEM143Q96AN5 459 aa8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 PBXIP1Q96AQ6 731 aa8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 DYDC2Q96IM9 177 aa8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 RPGRIP1Q96KN7 1286 aa8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 PRIMPOLQ96LW4 560 aa8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 LLPHQ9BRT6 129 aaKnown RBP8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 EMILIN2Q9BXX0 1053 aa8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 CSRNP2Q9H175 543 aa8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 TUFT1Q9NNX1 390 aa8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 XPNPEP1Q9NQW7 623 aa8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 ZMYM2Q9UBW7 1377 aa8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 GIT1Q9Y2X7 761 aa8.67□□□□□ -1.02
PTCSC3-201ENST00000556013 ATG2AQ2TAZ0 1938 aa8.66□□□□□ -1.02
PTCSC3-201ENST00000556013 PLXNA4Q9HCM2 1894 aa8.66□□□□□ -1.02
PTCSC3-201ENST00000556013 KIAA1671Q9BY89 1806 aa8.66□□□□□ -1.02
PTCSC3-201ENST00000556013 C5orf42Q9H799 3197 aa8.66□□□□□ -1.02
PTCSC3-201ENST00000556013 A0A1B0GUA9 196 aa8.66□□□□□ -1.02
PTCSC3-201ENST00000556013 ZC3H11AO75152 810 aaKnown RBP eCLIP8.66□□□□□ -1.02
PTCSC3-201ENST00000556013 NR1I2O75469 434 aa8.66□□□□□ -1.02
PTCSC3-201ENST00000556013 ERLIN2O94905 339 aa8.66□□□□□ -1.02
PTCSC3-201ENST00000556013 PAPLNO95428 1278 aa8.66□□□□□ -1.02
PTCSC3-201ENST00000556013 EFEMP2O95967 443 aa8.66□□□□□ -1.02
PTCSC3-201ENST00000556013 SOD2P04179 222 aa8.66□□□□□ -1.02
PTCSC3-201ENST00000556013 ITGA4P13612 1032 aa8.66□□□□□ -1.02
PTCSC3-201ENST00000556013 PBX3P40426 434 aa8.66□□□□□ -1.02
PTCSC3-201ENST00000556013 RARRES1P49788 294 aa8.66□□□□□ -1.02
PTCSC3-201ENST00000556013 NR5A1Q13285 461 aa8.66□□□□□ -1.02
PTCSC3-201ENST00000556013 CTTNQ14247 550 aaKnown RBP8.66□□□□□ -1.02
PTCSC3-201ENST00000556013 PTPN21Q16825 1174 aa8.66□□□□□ -1.02
PTCSC3-201ENST00000556013 NCAPH2Q6IBW4 605 aa8.66□□□□□ -1.02
PTCSC3-201ENST00000556013 KIAA1841Q6NSI8 718 aa8.66□□□□□ -1.02
PTCSC3-201ENST00000556013 ELMSAN1Q6PJG2 1045 aa8.66□□□□□ -1.02
PTCSC3-201ENST00000556013 C15orf39Q6ZRI6 1047 aa8.66□□□□□ -1.02
PTCSC3-201ENST00000556013 ZNF280BQ86YH2 543 aa8.66□□□□□ -1.02
PTCSC3-201ENST00000556013 DIS3L2Q8IYB7 885 aaKnown RBP8.66□□□□□ -1.02
PTCSC3-201ENST00000556013 FBXL6Q8N531 539 aa8.66□□□□□ -1.02
PTCSC3-201ENST00000556013 CMASQ8NFW8 434 aaPredicted RBP8.66□□□□□ -1.02
PTCSC3-201ENST00000556013 LPPQ93052 612 aa8.66□□□□□ -1.02
PTCSC3-201ENST00000556013 FBXL18Q96ME1 805 aa8.66□□□□□ -1.02
PTCSC3-201ENST00000556013 NACC1Q96RE7 527 aa8.66□□□□□ -1.02
PTCSC3-201ENST00000556013 POLR3CQ9BUI4 534 aaPredicted RBP8.66□□□□□ -1.02
PTCSC3-201ENST00000556013 MINDY3Q9H8M7 445 aa8.66□□□□□ -1.02
PTCSC3-201ENST00000556013 GJB4Q9NTQ9 266 aa8.66□□□□□ -1.02
PTCSC3-201ENST00000556013 STK24Q9Y6E0 443 aa8.66□□□□□ -1.02
PTCSC3-201ENST00000556013 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 MEIS3P2A8K0S8 358 aa8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 NRP1O14786 923 aa8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 ZBTB39O15060 712 aa8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 NEMFO60524 1076 aa8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 DDHD2O94830 711 aa8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 RPA1P27694 616 aa8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 TXKP42681 527 aa8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 TRAPPC10P48553 1259 aa8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 SLC11A1P49279 550 aa8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 HMGN5P82970 282 aaKnown RBP8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 RBM10P98175 930 aaKnown RBP8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 CYP4A11Q02928 519 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms