RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 RHOT2Q8IXI1 618 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 OTUD6BQ8N6M0 293 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 UBL4BQ8N7F7 174 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 LNX1Q8TBB1 728 aaPredicted RBP7.58□□□□□ -1.2
TDP1-213ENST00000555880 LXNQ9BS40 222 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 SAMM50Q9Y512 469 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 PFASO15067 1338 aa7.57□□□□□ -1.2
TDP1-213ENST00000555880 SYNGAP1Q96PV0 1343 aa7.57□□□□□ -1.2
TDP1-213ENST00000555880 SMCHD1A6NHR9 2005 aa7.57□□□□□ -1.2
TDP1-213ENST00000555880 MIF4GDA9UHW6 222 aaKnown RBP7.57□□□□□ -1.2
TDP1-213ENST00000555880 E7EVH7 732 aa7.57□□□□□ -1.2
TDP1-213ENST00000555880 K7ENM7 598 aa7.57□□□□□ -1.2
TDP1-213ENST00000555880 IPO5O00410 1097 aaKnown RBP7.57□□□□□ -1.2
TDP1-213ENST00000555880 VIL1P09327 827 aaKnown RBP7.57□□□□□ -1.2
TDP1-213ENST00000555880 TRIM49P0CI25 452 aa7.57□□□□□ -1.2
TDP1-213ENST00000555880 TRIM49CP0CI26 452 aa7.57□□□□□ -1.2
TDP1-213ENST00000555880 ITGA4P13612 1032 aa7.57□□□□□ -1.2
TDP1-213ENST00000555880 HSPA6P17066 643 aa7.57□□□□□ -1.2
TDP1-213ENST00000555880 ECHS1P30084 290 aa7.57□□□□□ -1.2
TDP1-213ENST00000555880 GBP1P32455 592 aa7.57□□□□□ -1.2
TDP1-213ENST00000555880 LIG3P49916 1009 aa7.57□□□□□ -1.2
TDP1-213ENST00000555880 EIF3BP55884 814 aaKnown RBP7.57□□□□□ -1.2
TDP1-213ENST00000555880 PTENP60484 403 aa7.57□□□□□ -1.2
TDP1-213ENST00000555880 DR1Q01658 176 aa7.57□□□□□ -1.2
TDP1-213ENST00000555880 DHX9Q08211 1270 aaKnown RBP7.57□□□□□ -1.2
TDP1-213ENST00000555880 ZNF844Q08AG5 666 aa7.57□□□□□ -1.2
TDP1-213ENST00000555880 DHX34Q14147 1143 aaKnown RBP7.57□□□□□ -1.2
TDP1-213ENST00000555880 COG2Q14746 738 aa7.57□□□□□ -1.2
TDP1-213ENST00000555880 KIF22Q14807 665 aa7.57□□□□□ -1.2
TDP1-213ENST00000555880 ARHGAP44Q17R89 818 aa7.57□□□□□ -1.2
TDP1-213ENST00000555880 SPDYCQ5MJ68 293 aa7.57□□□□□ -1.2
TDP1-213ENST00000555880 AGBL2Q5U5Z8 902 aa7.57□□□□□ -1.2
TDP1-213ENST00000555880 TMC3Q7Z5M5 1100 aa7.57□□□□□ -1.2
TDP1-213ENST00000555880 FAM160B2Q86V87 743 aa7.57□□□□□ -1.2
TDP1-213ENST00000555880 NLRP14Q86W24 1093 aa7.57□□□□□ -1.2
TDP1-213ENST00000555880 DDX42Q86XP3 938 aaKnown RBP eCLIP7.57□□□□□ -1.2
TDP1-213ENST00000555880 DNAAF5Q86Y56 855 aa7.57□□□□□ -1.2
TDP1-213ENST00000555880 SUPT20HQ8NEM7 779 aa7.57□□□□□ -1.2
TDP1-213ENST00000555880 FMO2Q99518 471 aa7.57□□□□□ -1.2
TDP1-213ENST00000555880 RIT2Q99578 217 aa7.57□□□□□ -1.2
TDP1-213ENST00000555880 TMEM206Q9H813 350 aa7.57□□□□□ -1.2
TDP1-213ENST00000555880 OSGEPQ9NPF4 335 aa7.57□□□□□ -1.2
TDP1-213ENST00000555880 DMAC2Q9NW81 257 aa7.57□□□□□ -1.2
TDP1-213ENST00000555880 BCCIPQ9P287 314 aaKnown RBP eCLIP7.57□□□□□ -1.2
TDP1-213ENST00000555880 LARSQ9P2J5 1176 aaKnown RBP7.57□□□□□ -1.2
TDP1-213ENST00000555880 RGS17Q9UGC6 210 aaPredicted RBP7.57□□□□□ -1.2
TDP1-213ENST00000555880 TMX2Q9Y320 296 aa7.57□□□□□ -1.2
TDP1-213ENST00000555880 ZNF646O15015 1829 aaPredicted RBP7.57□□□□□ -1.2
TDP1-213ENST00000555880 A0A1W2PRG0 241 aa7.56□□□□□ -1.2
TDP1-213ENST00000555880 FAM187AA6NFU0 413 aa7.56□□□□□ -1.2
TDP1-213ENST00000555880 H0YHG0 523 aa7.56□□□□□ -1.2
TDP1-213ENST00000555880 P4HA2O15460 535 aa7.56□□□□□ -1.2
TDP1-213ENST00000555880 MAP3K7O43318 606 aa7.56□□□□□ -1.2
TDP1-213ENST00000555880 HIP1RO75146 1068 aa7.56□□□□□ -1.2
TDP1-213ENST00000555880 LRRN2O75325 713 aa7.56□□□□□ -1.2
TDP1-213ENST00000555880 FAM107AO95990 144 aa7.56□□□□□ -1.2
TDP1-213ENST00000555880 ZBTB48P10074 688 aaPredicted RBP7.56□□□□□ -1.2
TDP1-213ENST00000555880 USP8P40818 1118 aa7.56□□□□□ -1.2
TDP1-213ENST00000555880 UBXN2AP68543 259 aa7.56□□□□□ -1.2
TDP1-213ENST00000555880 KRT71Q3SY84 523 aa7.56□□□□□ -1.2
TDP1-213ENST00000555880 CBWD6Q4V339 395 aa7.56□□□□□ -1.2
TDP1-213ENST00000555880 CBWD3Q5JTY5 395 aa7.56□□□□□ -1.2
TDP1-213ENST00000555880 CBWD5Q5RIA9 395 aa7.56□□□□□ -1.2
TDP1-213ENST00000555880 NAA35Q5VZE5 725 aa7.56□□□□□ -1.2
TDP1-213ENST00000555880 C11orf63Q6NUN7 778 aa7.56□□□□□ -1.2
TDP1-213ENST00000555880 PACS2Q86VP3 889 aa7.56□□□□□ -1.2
TDP1-213ENST00000555880 HOOK3Q86VS8 718 aa7.56□□□□□ -1.2
TDP1-213ENST00000555880 KSR1Q8IVT5 923 aa7.56□□□□□ -1.2
TDP1-213ENST00000555880 C3orf20Q8ND61 904 aa7.56□□□□□ -1.2
TDP1-213ENST00000555880 ZNF473Q8WTR7 871 aaKnown RBP7.56□□□□□ -1.2
TDP1-213ENST00000555880 SEC14L1Q92503 715 aa7.56□□□□□ -1.2
TDP1-213ENST00000555880 HOOK2Q96ED9 719 aa7.56□□□□□ -1.2
TDP1-213ENST00000555880 ACCSQ96QU6 501 aa7.56□□□□□ -1.2
TDP1-213ENST00000555880 CCT8L2Q96SF2 557 aa7.56□□□□□ -1.2
TDP1-213ENST00000555880 AGPAT1Q99943 283 aa7.56□□□□□ -1.2
TDP1-213ENST00000555880 DPH5Q9H2P9 285 aa7.56□□□□□ -1.2
TDP1-213ENST00000555880 RANBP17Q9H2T7 1088 aaKnown RBP7.56□□□□□ -1.2
TDP1-213ENST00000555880 UNC45AQ9H3U1 944 aa7.56□□□□□ -1.2
TDP1-213ENST00000555880 CTTNBP2NLQ9P2B4 639 aa7.56□□□□□ -1.2
TDP1-213ENST00000555880 PPP1R9AQ9ULJ8 1098 aa7.56□□□□□ -1.2
TDP1-213ENST00000555880 H0YGN5 161 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 ZBTB39O15060 712 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 MEFVO15553 781 aaPredicted RBP7.55□□□□□ -1.2
TDP1-213ENST00000555880 MAPTP10636 758 aaKnown RBP7.55□□□□□ -1.2
TDP1-213ENST00000555880 ECE1P42892 770 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 HADHBP55084 474 aaKnown RBP7.55□□□□□ -1.2
TDP1-213ENST00000555880 PPP2R2AP63151 447 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 JAG1P78504 1218 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 PPATQ06203 517 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 PLS1Q14651 629 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 UAP1Q16222 522 aaPredicted RBP7.55□□□□□ -1.2
TDP1-213ENST00000555880 AOC3Q16853 763 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 GRIPAP1Q4V328 841 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 PADI6Q6TGC4 694 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 MIER3Q7Z3K6 550 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 YTHDF3Q7Z739 585 aaKnown RBP7.55□□□□□ -1.2
TDP1-213ENST00000555880 BANK1Q8NDB2 785 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 OR2W6PQ8NHA6 318 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 MYCBPAPQ8TBZ2 947 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 IWS1Q96ST2 819 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms