RNA–Protein interactions for RNA: ENST00000555709.6

MTHFD1-211, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-211ENST00000555709 PADI6Q6TGC4 694 aa12.99□□□□□ -0.33
MTHFD1-211ENST00000555709 DDX12PQ92771 950 aa12.99□□□□□ -0.33
MTHFD1-211ENST00000555709 DNAJC19Q96DA6 116 aa12.99□□□□□ -0.33
MTHFD1-211ENST00000555709 CEP170P1Q96L14 293 aa12.99□□□□□ -0.33
MTHFD1-211ENST00000555709 REEP2Q9BRK0 252 aa12.99□□□□□ -0.33
MTHFD1-211ENST00000555709 MTG1Q9BT17 334 aaPredicted RBP12.99□□□□□ -0.33
MTHFD1-211ENST00000555709 LRRC27Q9C0I9 530 aa12.99□□□□□ -0.33
MTHFD1-211ENST00000555709 BLZF1Q9H2G9 400 aa12.99□□□□□ -0.33
MTHFD1-211ENST00000555709 NRBP2Q9NSY0 501 aa12.99□□□□□ -0.33
MTHFD1-211ENST00000555709 TUBE1Q9UJT0 475 aa12.99□□□□□ -0.33
MTHFD1-211ENST00000555709 KAT6AQ92794 2004 aa12.99□□□□□ -0.33
MTHFD1-211ENST00000555709 ACACBO00763 2458 aa12.99□□□□□ -0.33
MTHFD1-211ENST00000555709 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.98□□□□□ -0.33
MTHFD1-211ENST00000555709 NPHP3-ACAD11A0A0J9YXS1 232 aa12.98□□□□□ -0.33
MTHFD1-211ENST00000555709 FRMD3A2A2Y4 597 aa12.98□□□□□ -0.33
MTHFD1-211ENST00000555709 KLRC4O43908 158 aa12.98□□□□□ -0.33
MTHFD1-211ENST00000555709 USO1O60763 962 aaKnown RBP12.98□□□□□ -0.33
MTHFD1-211ENST00000555709 NBNO60934 754 aa12.98□□□□□ -0.33
MTHFD1-211ENST00000555709 DGAT1O75907 488 aa12.98□□□□□ -0.33
MTHFD1-211ENST00000555709 HOXC8P31273 242 aa12.98□□□□□ -0.33
MTHFD1-211ENST00000555709 SARSP49591 514 aaKnown RBP12.98□□□□□ -0.33
MTHFD1-211ENST00000555709 PSEN2P49810 448 aa12.98□□□□□ -0.33
MTHFD1-211ENST00000555709 HTRA4P83105 476 aaPredicted RBP12.98□□□□□ -0.33
MTHFD1-211ENST00000555709 PTPN11Q06124 597 aaPredicted RBP12.98□□□□□ -0.33
MTHFD1-211ENST00000555709 SIGLEC14Q08ET2 396 aa12.98□□□□□ -0.33
MTHFD1-211ENST00000555709 MAPK7Q13164 816 aa12.98□□□□□ -0.33
MTHFD1-211ENST00000555709 MKRN4PQ13434 485 aaPredicted RBP12.98□□□□□ -0.33
MTHFD1-211ENST00000555709 KIAA0753Q2KHM9 967 aa12.98□□□□□ -0.33
MTHFD1-211ENST00000555709 MTERF2Q49AM1 385 aa12.98□□□□□ -0.33
MTHFD1-211ENST00000555709 FAM117BQ6P1L5 589 aa12.98□□□□□ -0.33
MTHFD1-211ENST00000555709 TRMT1LQ7Z2T5 733 aaKnown RBP12.98□□□□□ -0.33
MTHFD1-211ENST00000555709 CCDC43Q96MW1 224 aaKnown RBP12.98□□□□□ -0.33
MTHFD1-211ENST00000555709 KATNAL1Q9BW62 490 aa12.98□□□□□ -0.33
MTHFD1-211ENST00000555709 DHX33Q9H6R0 707 aaKnown RBP12.98□□□□□ -0.33
MTHFD1-211ENST00000555709 XPNPEP1Q9NQW7 623 aa12.98□□□□□ -0.33
MTHFD1-211ENST00000555709 KIAA1468Q9P260 1216 aa12.98□□□□□ -0.33
MTHFD1-211ENST00000555709 INSL6Q9Y581 213 aa12.98□□□□□ -0.33
MTHFD1-211ENST00000555709 PCDHA5Q9Y5H7 936 aa12.98□□□□□ -0.33
MTHFD1-211ENST00000555709 EP300Q09472 2414 aaPredicted RBP12.97□□□□□ -0.33
MTHFD1-211ENST00000555709 MICAL3Q7RTP6 2002 aa12.97□□□□□ -0.33
MTHFD1-211ENST00000555709 LOC730098B7Z3J9 87 aa12.97□□□□□ -0.33
MTHFD1-211ENST00000555709 NCK2O43639 380 aa12.97□□□□□ -0.33
MTHFD1-211ENST00000555709 TBX10O75333 385 aa12.97□□□□□ -0.33
MTHFD1-211ENST00000555709 INSRRP14616 1297 aa12.97□□□□□ -0.33
MTHFD1-211ENST00000555709 RFC5P40937 340 aa12.97□□□□□ -0.33
MTHFD1-211ENST00000555709 ZNF131P52739 623 aa12.97□□□□□ -0.33
MTHFD1-211ENST00000555709 NUBP1P53384 320 aa12.97□□□□□ -0.33
MTHFD1-211ENST00000555709 ASIC1P78348 528 aa12.97□□□□□ -0.33
MTHFD1-211ENST00000555709 EHHADHQ08426 723 aa12.97□□□□□ -0.33
MTHFD1-211ENST00000555709 PPFIA1Q13136 1202 aa12.97□□□□□ -0.33
MTHFD1-211ENST00000555709 GPM6BQ13491 265 aa12.97□□□□□ -0.33
MTHFD1-211ENST00000555709 GIT2Q14161 759 aa12.97□□□□□ -0.33
MTHFD1-211ENST00000555709 CBX2Q14781 532 aaPredicted RBP12.97□□□□□ -0.33
MTHFD1-211ENST00000555709 EMC2Q15006 297 aa12.97□□□□□ -0.33
MTHFD1-211ENST00000555709 ZNF484Q5JVG2 852 aa12.97□□□□□ -0.33
MTHFD1-211ENST00000555709 DYMQ7RTS9 669 aa12.97□□□□□ -0.33
MTHFD1-211ENST00000555709 DAW1Q8N136 415 aa12.97□□□□□ -0.33
MTHFD1-211ENST00000555709 CAGE1Q8TC20 777 aa12.97□□□□□ -0.33
MTHFD1-211ENST00000555709 SAMD11Q96NU1 681 aa12.97□□□□□ -0.33
MTHFD1-211ENST00000555709 TIPINQ9BVW5 301 aa12.97□□□□□ -0.33
MTHFD1-211ENST00000555709 ATP6V0A4Q9HBG4 840 aa12.97□□□□□ -0.33
MTHFD1-211ENST00000555709 ODF2LQ9ULJ1 636 aa12.97□□□□□ -0.33
MTHFD1-211ENST00000555709 CHD6Q8TD26 2715 aa12.97□□□□□ -0.33
MTHFD1-211ENST00000555709 CHD8Q9HCK8 2581 aa12.96□□□□□ -0.33
MTHFD1-211ENST00000555709 IGKV6-21A0A0C4DH24 114 aa12.96□□□□□ -0.33
MTHFD1-211ENST00000555709 PVALEFA0A1B0GWK0 134 aa12.96□□□□□ -0.33
MTHFD1-211ENST00000555709 SYCE3A1L190 88 aa12.96□□□□□ -0.33
MTHFD1-211ENST00000555709 RSPH10B2B2RC85 870 aa12.96□□□□□ -0.33
MTHFD1-211ENST00000555709 GALR2O43603 387 aaPredicted RBP12.96□□□□□ -0.33
MTHFD1-211ENST00000555709 EFCAB14O75071 495 aa12.96□□□□□ -0.33
MTHFD1-211ENST00000555709 MAFO75444 373 aaPredicted RBP12.96□□□□□ -0.33
MTHFD1-211ENST00000555709 SMC2O95347 1197 aa12.96□□□□□ -0.33
MTHFD1-211ENST00000555709 C22orf31O95567 290 aa12.96□□□□□ -0.33
MTHFD1-211ENST00000555709 RPN1P04843 607 aaKnown RBP12.96□□□□□ -0.33
MTHFD1-211ENST00000555709 RSPH10BP0C881 870 aa12.96□□□□□ -0.33
MTHFD1-211ENST00000555709 SMIM10L2AP0DMW4 78 aa12.96□□□□□ -0.33
MTHFD1-211ENST00000555709 SMIM10L2BP0DMW5 78 aa12.96□□□□□ -0.33
MTHFD1-211ENST00000555709 SELPP16109 830 aa12.96□□□□□ -0.33
MTHFD1-211ENST00000555709 CACNB1Q02641 598 aaPredicted RBP12.96□□□□□ -0.33
MTHFD1-211ENST00000555709 RBL2Q08999 1139 aa12.96□□□□□ -0.33
MTHFD1-211ENST00000555709 RAD51AP2Q09MP3 1159 aa12.96□□□□□ -0.33
MTHFD1-211ENST00000555709 HYAL1Q12794 435 aa12.96□□□□□ -0.33
MTHFD1-211ENST00000555709 KCNB1Q14721 858 aa12.96□□□□□ -0.33
MTHFD1-211ENST00000555709 GRIK4Q16099 956 aa12.96□□□□□ -0.33
MTHFD1-211ENST00000555709 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.96□□□□□ -0.339e-10■■■■■ 31.3
MTHFD1-211ENST00000555709 UNC13DQ70J99 1090 aa12.96□□□□□ -0.33
MTHFD1-211ENST00000555709 LRRC8DQ7L1W4 858 aa12.96□□□□□ -0.33
MTHFD1-211ENST00000555709 LINC01465Q8N7H1 131 aa12.96□□□□□ -0.33
MTHFD1-211ENST00000555709 MCPH1Q8NEM0 835 aa12.96□□□□□ -0.33
MTHFD1-211ENST00000555709 LMBR1Q8WVP7 490 aa12.96□□□□□ -0.33
MTHFD1-211ENST00000555709 TRAPPC12Q8WVT3 735 aa12.96□□□□□ -0.33
MTHFD1-211ENST00000555709 DHX38Q92620 1227 aaKnown RBP12.96□□□□□ -0.33
MTHFD1-211ENST00000555709 SMARCE1Q969G3 411 aa12.96□□□□□ -0.33
MTHFD1-211ENST00000555709 GSDMAQ96QA5 445 aa12.96□□□□□ -0.33
MTHFD1-211ENST00000555709 FUCA2Q9BTY2 467 aa12.96□□□□□ -0.33
MTHFD1-211ENST00000555709 BMP2KQ9NSY1 1161 aaPredicted RBP12.96□□□□□ -0.33
MTHFD1-211ENST00000555709 MAN1B1Q9UKM7 699 aa12.96□□□□□ -0.33
MTHFD1-211ENST00000555709 CFAP47Q6ZTR5 3102 aa12.96□□□□□ -0.34
MTHFD1-211ENST00000555709 EVPLQ92817 2033 aa12.96□□□□□ -0.34
MTHFD1-211ENST00000555709 MBLAC1A4D2B0 266 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms