RNA–Protein interactions for RNA: ENST00000555688.1

LINC00641-202, long intergenic non-protein coding RNA 641, humanhuman

TSL 1 (best) BASIC

Gene LINC00641, Length 1,763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-202ENST00000555688 NOC4LQ9BVI4 516 aaKnown RBP8.59□□□□□ -1.03
LINC00641-202ENST00000555688 NAA15Q9BXJ9 866 aaKnown RBP8.59□□□□□ -1.03
LINC00641-202ENST00000555688 ABHD10Q9NUJ1 306 aa8.59□□□□□ -1.03
LINC00641-202ENST00000555688 CAPN11Q9UMQ6 739 aa8.59□□□□□ -1.03
LINC00641-202ENST00000555688 PPP2R2CQ9Y2T4 447 aa8.59□□□□□ -1.03
LINC00641-202ENST00000555688 DDX39AO00148 427 aaKnown RBP8.58□□□□□ -1.04
LINC00641-202ENST00000555688 FGFR1OPO95684 399 aaKnown RBP8.58□□□□□ -1.04
LINC00641-202ENST00000555688 P4HBP07237 508 aaKnown RBP8.58□□□□□ -1.04
LINC00641-202ENST00000555688 MYBP10242 640 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 MYCLP12524 364 aaPredicted RBP8.58□□□□□ -1.04
LINC00641-202ENST00000555688 ZNF131P52739 623 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 ERVK-24P63145 666 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 SYCP1Q15431 976 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 BMT2Q1RMZ1 405 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 VWA3BQ502W6 1294 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 ARHGEF16Q5VV41 709 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 XRRA1Q6P2D8 792 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 Q6ZNB5 142 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 RIPOR1Q6ZS17 1223 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 NELFCDQ8IXH7 590 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 NEK9Q8TD19 979 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 CEP63Q96MT8 703 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 TSG101Q99816 390 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 LXNQ9BS40 222 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 TEX13BQ9BXU2 312 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 MAF1Q9H063 256 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 ZHX3Q9H4I2 956 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 C11orf16Q9NQ32 467 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 A1CFQ9NQ94 594 aaKnown RBP8.58□□□□□ -1.04
LINC00641-202ENST00000555688 OLFML3Q9NRN5 406 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 TBC1D22BQ9NU19 505 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 CYP39A1Q9NYL5 469 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 TRAF3IP3Q9Y228 551 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 SIK3Q9Y2K2 1263 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 LCTP09848 1927 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 TRAF5O00463 557 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 FANCGO15287 622 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 PRPF6O94906 941 aaKnown RBP8.58□□□□□ -1.04
LINC00641-202ENST00000555688 LYPLA2O95372 231 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 CCNE2O96020 404 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 TPM2P07951 284 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 EPB42P16452 691 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 GTF2F1P35269 517 aaKnown RBP eCLIP8.58□□□□□ -1.04
LINC00641-202ENST00000555688 KRT9P35527 623 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 MAPK7Q13164 816 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 DSC3Q14574 896 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 MAN2A1Q16706 1144 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 KNOP1Q1ED39 458 aaKnown RBP8.58□□□□□ -1.04
LINC00641-202ENST00000555688 EDRF1Q3B7T1 1238 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 FIGNQ5HY92 759 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 WDR59Q6PJI9 974 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 LBX2Q6XYB7 198 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 USP50Q70EL3 339 aaPredicted RBP8.58□□□□□ -1.04
LINC00641-202ENST00000555688 MOB2Q70IA6 237 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 MIER3Q7Z3K6 550 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 CLMNQ96JQ2 1002 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 INPP4AQ96PE3 977 aaPredicted RBP8.58□□□□□ -1.04
LINC00641-202ENST00000555688 DNAJC7Q99615 494 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 ZCCHC2Q9C0B9 1178 aaKnown RBP8.58□□□□□ -1.04
LINC00641-202ENST00000555688 NDST4Q9H3R1 872 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 AGPAT5Q9NUQ2 364 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 KCND2Q9NZV8 630 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 PAXBP1Q9Y5B6 917 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 COL4A3BPQ9Y5P4 624 aa8.58□□□□□ -1.04
LINC00641-202ENST00000555688 KIAA1217Q5T5P2 1943 aa8.57□□□□□ -1.04
LINC00641-202ENST00000555688 LOC285556D6RIA3 1793 aa8.57□□□□□ -1.04
LINC00641-202ENST00000555688 UQCRHLA0A096LP55 91 aa8.57□□□□□ -1.04
LINC00641-202ENST00000555688 A0A0G2JLL6 359 aaPredicted RBP8.57□□□□□ -1.04
LINC00641-202ENST00000555688 CCP110O43303 1012 aa8.57□□□□□ -1.04
LINC00641-202ENST00000555688 ZSCAN12O43309 604 aa8.57□□□□□ -1.04
LINC00641-202ENST00000555688 PEX10O60683 326 aa8.57□□□□□ -1.04
LINC00641-202ENST00000555688 KIF20AO95235 890 aa8.57□□□□□ -1.04
LINC00641-202ENST00000555688 UQCRHP07919 91 aa8.57□□□□□ -1.04
LINC00641-202ENST00000555688 THBS1P07996 1170 aa8.57□□□□□ -1.04
LINC00641-202ENST00000555688 GAP43P17677 238 aa8.57□□□□□ -1.04
LINC00641-202ENST00000555688 GUCY2CP25092 1073 aa8.57□□□□□ -1.04
LINC00641-202ENST00000555688 EPHX2P34913 555 aa8.57□□□□□ -1.04
LINC00641-202ENST00000555688 PPATQ06203 517 aa8.57□□□□□ -1.04
LINC00641-202ENST00000555688 KCNMA1Q12791 1236 aa8.57□□□□□ -1.04
LINC00641-202ENST00000555688 ADAM9Q13443 819 aa8.57□□□□□ -1.04
LINC00641-202ENST00000555688 PRRT2Q7Z6L0 340 aaPredicted RBP8.57□□□□□ -1.04
LINC00641-202ENST00000555688 TMTC1Q8IUR5 882 aa8.57□□□□□ -1.04
LINC00641-202ENST00000555688 DAW1Q8N136 415 aa8.57□□□□□ -1.04
LINC00641-202ENST00000555688 TTC16Q8NEE8 873 aa8.57□□□□□ -1.04
LINC00641-202ENST00000555688 OR8K1Q8NGG5 319 aa8.57□□□□□ -1.04
LINC00641-202ENST00000555688 NSUN6Q8TEA1 469 aaKnown RBP8.57□□□□□ -1.04
LINC00641-202ENST00000555688 CDCA5Q96FF9 252 aa8.57□□□□□ -1.04
LINC00641-202ENST00000555688 CHP1Q99653 195 aa8.57□□□□□ -1.04
LINC00641-202ENST00000555688 DESI2Q9BSY9 194 aa8.57□□□□□ -1.04
LINC00641-202ENST00000555688 NUP58Q9BVL2 599 aa8.57□□□□□ -1.04
LINC00641-202ENST00000555688 STRA6Q9BX79 667 aa8.57□□□□□ -1.04
LINC00641-202ENST00000555688 NUCKS1Q9H1E3 243 aaKnown RBP8.57□□□□□ -1.04
LINC00641-202ENST00000555688 ZSWIM4Q9H7M6 989 aa8.57□□□□□ -1.04
LINC00641-202ENST00000555688 ACAD9Q9H845 621 aa8.57□□□□□ -1.04
LINC00641-202ENST00000555688 BTBD7Q9P203 1132 aa8.57□□□□□ -1.04
LINC00641-202ENST00000555688 FNDC3AQ9Y2H6 1198 aaKnown RBP8.57□□□□□ -1.04
LINC00641-202ENST00000555688 CSADQ9Y600 493 aa8.57□□□□□ -1.04
LINC00641-202ENST00000555688 ASTN1O14525 1302 aa8.56□□□□□ -1.04
LINC00641-202ENST00000555688 WDR81Q562E7 1941 aa8.56□□□□□ -1.04
LINC00641-202ENST00000555688 LOXHD1Q8IVV2 1947 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms