RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 AXLP30530 894 aa15.35■□□□□ 0.05
PCNX4-209ENST00000555569 TRAPPC10P48553 1259 aa15.35■□□□□ 0.05
PCNX4-209ENST00000555569 RNASELQ05823 741 aaKnown RBP15.35■□□□□ 0.05
PCNX4-209ENST00000555569 CAPSQ13938 189 aa15.35■□□□□ 0.05
PCNX4-209ENST00000555569 UBXN11Q5T124 520 aa15.35■□□□□ 0.05
PCNX4-209ENST00000555569 AGMOQ6ZNB7 445 aa15.35■□□□□ 0.05
PCNX4-209ENST00000555569 TMC7Q7Z402 723 aa15.35■□□□□ 0.05
PCNX4-209ENST00000555569 CATSPER3Q86XQ3 398 aa15.35■□□□□ 0.05
PCNX4-209ENST00000555569 SMRP1Q8NCR6 262 aa15.35■□□□□ 0.05
PCNX4-209ENST00000555569 VN1R2Q8NFZ6 395 aa15.35■□□□□ 0.05
PCNX4-209ENST00000555569 ERMNQ8TAM6 284 aa15.35■□□□□ 0.05
PCNX4-209ENST00000555569 TMEM169Q96HH4 297 aa15.35■□□□□ 0.05
PCNX4-209ENST00000555569 POLR3CQ9BUI4 534 aaPredicted RBP15.35■□□□□ 0.05
PCNX4-209ENST00000555569 POLR3FQ9H1D9 316 aaPredicted RBP15.35■□□□□ 0.05
PCNX4-209ENST00000555569 NRDE2Q9H7Z3 1164 aa15.35■□□□□ 0.05
PCNX4-209ENST00000555569 DBR1Q9UK59 544 aaKnown RBP15.35■□□□□ 0.05
PCNX4-209ENST00000555569 CNTNAP2Q9UHC6 1331 aa15.35■□□□□ 0.05
PCNX4-209ENST00000555569 C19orf67A6NJJ6 358 aa15.34■□□□□ 0.05
PCNX4-209ENST00000555569 HIDE1A8MVS5 230 aa15.34■□□□□ 0.05
PCNX4-209ENST00000555569 INO80B-WBP1J3KQ70 363 aa15.34■□□□□ 0.05
PCNX4-209ENST00000555569 TSPAN1O60635 241 aa15.34■□□□□ 0.05
PCNX4-209ENST00000555569 NCLP19338 710 aaKnown RBP15.34■□□□□ 0.05
PCNX4-209ENST00000555569 COL9A1P20849 921 aa15.34■□□□□ 0.05
PCNX4-209ENST00000555569 U2AF2P26368 475 aaKnown RBP eCLIP15.34■□□□□ 0.057e-6■■□□□ 14.4
PCNX4-209ENST00000555569 RPA1P27694 616 aa15.34■□□□□ 0.05
PCNX4-209ENST00000555569 NCBP1Q09161 790 aaKnown RBP15.34■□□□□ 0.05
PCNX4-209ENST00000555569 CNNM3Q8NE01 707 aa15.34■□□□□ 0.05
PCNX4-209ENST00000555569 URGCPQ8TCY9 931 aa15.34■□□□□ 0.05
PCNX4-209ENST00000555569 CCDC51Q96ER9 411 aa15.34■□□□□ 0.05
PCNX4-209ENST00000555569 NACC1Q96RE7 527 aa15.34■□□□□ 0.05
PCNX4-209ENST00000555569 POP1Q99575 1024 aaKnown RBP15.34■□□□□ 0.05
PCNX4-209ENST00000555569 GBP3Q9H0R5 595 aa15.34■□□□□ 0.05
PCNX4-209ENST00000555569 RSAD1Q9HA92 442 aa15.34■□□□□ 0.05
PCNX4-209ENST00000555569 UPF2Q9HAU5 1272 aaKnown RBP15.34■□□□□ 0.05
PCNX4-209ENST00000555569 TDRD15B5MCY1 1934 aaKnown RBP15.33■□□□□ 0.05
PCNX4-209ENST00000555569 GALTP07902 379 aa15.33■□□□□ 0.04
PCNX4-209ENST00000555569 SRGAP2BP0DMP2 458 aa15.33■□□□□ 0.04
PCNX4-209ENST00000555569 RBM10P98175 930 aaKnown RBP15.33■□□□□ 0.04
PCNX4-209ENST00000555569 MBTD1Q05BQ5 628 aa15.33■□□□□ 0.04
PCNX4-209ENST00000555569 KCNC3Q14003 757 aa15.33■□□□□ 0.04
PCNX4-209ENST00000555569 NBR1Q14596 966 aa15.33■□□□□ 0.04
PCNX4-209ENST00000555569 SMC1AQ14683 1233 aaKnown RBP15.33■□□□□ 0.04
PCNX4-209ENST00000555569 BMS1Q14692 1282 aaKnown RBP15.33■□□□□ 0.04
PCNX4-209ENST00000555569 NOTUMQ6P988 496 aa15.33■□□□□ 0.04
PCNX4-209ENST00000555569 POTEGQ6S5H5 508 aa15.33■□□□□ 0.04
PCNX4-209ENST00000555569 MAEAQ7L5Y9 396 aa15.33■□□□□ 0.04
PCNX4-209ENST00000555569 C4orf32Q8N8J7 132 aa15.33■□□□□ 0.04
PCNX4-209ENST00000555569 MCPH1Q8NEM0 835 aa15.33■□□□□ 0.04
PCNX4-209ENST00000555569 CPB2Q96IY4 423 aa15.33■□□□□ 0.04
PCNX4-209ENST00000555569 NFKBIZQ9BYH8 718 aa15.33■□□□□ 0.04
PCNX4-209ENST00000555569 CSRNP2Q9H175 543 aa15.33■□□□□ 0.04
PCNX4-209ENST00000555569 KIF3AQ9Y496 699 aa15.33■□□□□ 0.04
PCNX4-209ENST00000555569 C5orf42Q9H799 3197 aa15.32■□□□□ 0.04
PCNX4-209ENST00000555569 ITGA4P13612 1032 aa15.32■□□□□ 0.04
PCNX4-209ENST00000555569 MUTP22033 750 aa15.32■□□□□ 0.04
PCNX4-209ENST00000555569 SLC11A1P49279 550 aa15.32■□□□□ 0.04
PCNX4-209ENST00000555569 FXR2P51116 673 aaKnown RBP eCLIP15.32■□□□□ 0.04
PCNX4-209ENST00000555569 AMHR2Q16671 573 aa15.32■□□□□ 0.04
PCNX4-209ENST00000555569 TMEM31Q5JXX7 168 aa15.32■□□□□ 0.04
PCNX4-209ENST00000555569 HAUS3Q68CZ6 603 aa15.32■□□□□ 0.04
PCNX4-209ENST00000555569 TMEM184AQ6ZMB5 413 aa15.32■□□□□ 0.04
PCNX4-209ENST00000555569 TMEM173Q86WV6 379 aaPredicted RBP15.32■□□□□ 0.04
PCNX4-209ENST00000555569 ZNF280BQ86YH2 543 aa15.32■□□□□ 0.04
PCNX4-209ENST00000555569 VPS52Q8N1B4 723 aa15.32■□□□□ 0.04
PCNX4-209ENST00000555569 MRPL43Q8N983 215 aaKnown RBP15.32■□□□□ 0.04
PCNX4-209ENST00000555569 SMG8Q8ND04 991 aaKnown RBP15.32■□□□□ 0.04
PCNX4-209ENST00000555569 IGSF21Q96ID5 467 aa15.32■□□□□ 0.04
PCNX4-209ENST00000555569 FAM193BQ96PV7 902 aaPredicted RBP15.32■□□□□ 0.04
PCNX4-209ENST00000555569 EIF2AQ9BY44 585 aaKnown RBP15.32■□□□□ 0.04
PCNX4-209ENST00000555569 ZBP1Q9H171 429 aa15.32■□□□□ 0.04
PCNX4-209ENST00000555569 UBN1Q9NPG3 1134 aa15.32■□□□□ 0.04
PCNX4-209ENST00000555569 GPRC5CQ9NQ84 441 aa15.32■□□□□ 0.04
PCNX4-209ENST00000555569 KANSL3Q9P2N6 904 aa15.32■□□□□ 0.04
PCNX4-209ENST00000555569 DNAJB4Q9UDY4 337 aa15.32■□□□□ 0.04
PCNX4-209ENST00000555569 USP15Q9Y4E8 981 aaPredicted RBP15.32■□□□□ 0.04
PCNX4-209ENST00000555569 IPPQ9Y573 584 aa15.32■□□□□ 0.04
PCNX4-209ENST00000555569 ARHGEF35A5YM69 484 aa15.31■□□□□ 0.04
PCNX4-209ENST00000555569 C2orf71A6NGG8 1288 aa15.31■□□□□ 0.04
PCNX4-209ENST00000555569 LRRIQ4A6NIV6 560 aa15.31■□□□□ 0.04
PCNX4-209ENST00000555569 B4GALT3O60512 393 aa15.31■□□□□ 0.04
PCNX4-209ENST00000555569 GPR37L1O60883 481 aa15.31■□□□□ 0.04
PCNX4-209ENST00000555569 CXCL14O95715 111 aa15.31■□□□□ 0.04
PCNX4-209ENST00000555569 ALADP13716 330 aa15.31■□□□□ 0.04
PCNX4-209ENST00000555569 ARF4P18085 180 aaPredicted RBP15.31■□□□□ 0.04
PCNX4-209ENST00000555569 CA8P35219 290 aa15.31■□□□□ 0.04
PCNX4-209ENST00000555569 TOB1P50616 345 aaPredicted RBP15.31■□□□□ 0.04
PCNX4-209ENST00000555569 AFF1P51825 1210 aaKnown RBP15.31■□□□□ 0.04
PCNX4-209ENST00000555569 LLGL2Q6P1M3 1020 aa15.31■□□□□ 0.04
PCNX4-209ENST00000555569 DDX53Q86TM3 631 aaKnown RBP15.31■□□□□ 0.04
PCNX4-209ENST00000555569 BCL7CQ8WUZ0 217 aaPredicted RBP15.31■□□□□ 0.04
PCNX4-209ENST00000555569 TMX3Q96JJ7 454 aa15.31■□□□□ 0.04
PCNX4-209ENST00000555569 TMEM175Q9BSA9 504 aa15.31■□□□□ 0.04
PCNX4-209ENST00000555569 LRFN3Q9BTN0 628 aa15.31■□□□□ 0.04
PCNX4-209ENST00000555569 PCDHB6Q9Y5E3 794 aa15.31■□□□□ 0.04
PCNX4-209ENST00000555569 FAM86C2PA6NEL3 165 aa15.3■□□□□ 0.04
PCNX4-209ENST00000555569 B4GALT5O43286 388 aa15.3■□□□□ 0.04
PCNX4-209ENST00000555569 DCXO43602 365 aa15.3■□□□□ 0.04
PCNX4-209ENST00000555569 DDHD2O94830 711 aa15.3■□□□□ 0.04
PCNX4-209ENST00000555569 POMCP01189 267 aa15.3■□□□□ 0.04
PCNX4-209ENST00000555569 CTSAP10619 480 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms