RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 RSAD1Q9HA92 442 aa27.15■■□□□ 1.94
PRKCH-216ENST00000555542 PRKAG3Q9UGI9 489 aa27.15■■□□□ 1.94
PRKCH-216ENST00000555542 DBR1Q9UK59 544 aaKnown RBP27.15■■□□□ 1.94
PRKCH-216ENST00000555542 ARHGEF35A5YM69 484 aa27.14■■□□□ 1.94
PRKCH-216ENST00000555542 CARNS1A5YM72 827 aa27.14■■□□□ 1.94
PRKCH-216ENST00000555542 LRRIQ4A6NIV6 560 aa27.14■■□□□ 1.94
PRKCH-216ENST00000555542 GLRA2P23416 452 aa27.14■■□□□ 1.94
PRKCH-216ENST00000555542 U2AF2P26368 475 aaKnown RBP eCLIP27.14■■□□□ 1.94
PRKCH-216ENST00000555542 RPA1P27694 616 aa27.14■■□□□ 1.94
PRKCH-216ENST00000555542 POU5F1BQ06416 359 aa27.14■■□□□ 1.94
PRKCH-216ENST00000555542 DUSP6Q16828 381 aa27.14■■□□□ 1.94
PRKCH-216ENST00000555542 CNNM3Q8NE01 707 aa27.14■■□□□ 1.94
PRKCH-216ENST00000555542 MCPH1Q8NEM0 835 aa27.14■■□□□ 1.94
PRKCH-216ENST00000555542 CPB2Q96IY4 423 aa27.14■■□□□ 1.94
PRKCH-216ENST00000555542 TMX3Q96JJ7 454 aa27.14■■□□□ 1.94
PRKCH-216ENST00000555542 FAM193BQ96PV7 902 aaPredicted RBP27.14■■□□□ 1.94
PRKCH-216ENST00000555542 CNTNAP2Q9UHC6 1331 aa27.14■■□□□ 1.93
PRKCH-216ENST00000555542 GLP2RO95838 553 aa27.13■■□□□ 1.93
PRKCH-216ENST00000555542 CCT6AP40227 531 aaKnown RBP27.13■■□□□ 1.93
PRKCH-216ENST00000555542 MBTD1Q05BQ5 628 aa27.13■■□□□ 1.93
PRKCH-216ENST00000555542 SMC1AQ14683 1233 aaKnown RBP27.13■■□□□ 1.93
PRKCH-216ENST00000555542 SMAD2Q15796 467 aaKnown RBP27.13■■□□□ 1.93
PRKCH-216ENST00000555542 UBXN11Q5T124 520 aa27.13■■□□□ 1.93
PRKCH-216ENST00000555542 AGMOQ6ZNB7 445 aa27.13■■□□□ 1.93
PRKCH-216ENST00000555542 CCDC51Q96ER9 411 aa27.13■■□□□ 1.93
PRKCH-216ENST00000555542 RAB34Q9BZG1 259 aa27.13■■□□□ 1.93
PRKCH-216ENST00000555542 TRIM6Q9C030 488 aaPredicted RBP27.13■■□□□ 1.93
PRKCH-216ENST00000555542 EPHX3Q9H6B9 360 aa27.13■■□□□ 1.93
PRKCH-216ENST00000555542 NRDE2Q9H7Z3 1164 aa27.13■■□□□ 1.93
PRKCH-216ENST00000555542 GPRC5CQ9NQ84 441 aa27.13■■□□□ 1.93
PRKCH-216ENST00000555542 CLEC1BQ9P126 229 aa27.13■■□□□ 1.93
PRKCH-216ENST00000555542 LRWD1Q9UFC0 647 aa27.13■■□□□ 1.93
PRKCH-216ENST00000555542 H3BQV1 296 aa27.12■■□□□ 1.93
PRKCH-216ENST00000555542 ITGA4P13612 1032 aa27.12■■□□□ 1.93
PRKCH-216ENST00000555542 ZP2Q05996 745 aa27.12■■□□□ 1.93
PRKCH-216ENST00000555542 MRPL10Q7Z7H8 261 aaKnown RBP27.12■■□□□ 1.93
PRKCH-216ENST00000555542 IFNLR1Q8IU57 520 aaPredicted RBP27.12■■□□□ 1.93
PRKCH-216ENST00000555542 ADHFE1Q8IWW8 467 aa27.12■■□□□ 1.93
PRKCH-216ENST00000555542 TMEM87AQ8NBN3 555 aa27.12■■□□□ 1.93
PRKCH-216ENST00000555542 MSLNLQ96KJ4 702 aa27.12■■□□□ 1.93
PRKCH-216ENST00000555542 POP1Q99575 1024 aaKnown RBP27.12■■□□□ 1.93
PRKCH-216ENST00000555542 PCDHB6Q9Y5E3 794 aa27.12■■□□□ 1.93
PRKCH-216ENST00000555542 HIDE1A8MVS5 230 aa27.11■■□□□ 1.93
PRKCH-216ENST00000555542 NCLP19338 710 aaKnown RBP27.11■■□□□ 1.93
PRKCH-216ENST00000555542 MCM2P49736 904 aa27.11■■□□□ 1.93
PRKCH-216ENST00000555542 FXR2P51116 673 aaKnown RBP eCLIP27.11■■□□□ 1.93
PRKCH-216ENST00000555542 COASYQ13057 564 aa27.11■■□□□ 1.93
PRKCH-216ENST00000555542 PTGDRQ13258 359 aa27.11■■□□□ 1.93
PRKCH-216ENST00000555542 LLGL2Q6P1M3 1020 aa27.11■■□□□ 1.93
PRKCH-216ENST00000555542 PADI6Q6TGC4 694 aa27.11■■□□□ 1.93
PRKCH-216ENST00000555542 EIF2AQ9BY44 585 aaKnown RBP27.11■■□□□ 1.93
PRKCH-216ENST00000555542 NFKBIZQ9BYH8 718 aa27.11■■□□□ 1.93
PRKCH-216ENST00000555542 CSRNP2Q9H175 543 aa27.11■■□□□ 1.93
PRKCH-216ENST00000555542 UBN1Q9NPG3 1134 aa27.11■■□□□ 1.93
PRKCH-216ENST00000555542 KANSL3Q9P2N6 904 aa27.11■■□□□ 1.93
PRKCH-216ENST00000555542 IPPQ9Y573 584 aa27.11■■□□□ 1.93
PRKCH-216ENST00000555542 GJB2P29033 226 aa27.1■■□□□ 1.93
PRKCH-216ENST00000555542 RBM10P98175 930 aaKnown RBP27.1■■□□□ 1.93
PRKCH-216ENST00000555542 TMEM132AQ24JP5 1023 aa27.1■■□□□ 1.93
PRKCH-216ENST00000555542 ZBTB8OSQ8IWT0 167 aa27.1■■□□□ 1.93
PRKCH-216ENST00000555542 HACE1Q8IYU2 909 aa27.1■■□□□ 1.93
PRKCH-216ENST00000555542 SMRP1Q8NCR6 262 aa27.1■■□□□ 1.93
PRKCH-216ENST00000555542 KHSRPQ92945 711 aaKnown RBP eCLIP27.1■■□□□ 1.93
PRKCH-216ENST00000555542 APOL6Q9BWW8 343 aa27.1■■□□□ 1.93
PRKCH-216ENST00000555542 DNAJB4Q9UDY4 337 aa27.1■■□□□ 1.93
PRKCH-216ENST00000555542 STK24Q9Y6E0 443 aa27.1■■□□□ 1.93
PRKCH-216ENST00000555542 CD2BP2O95400 341 aaKnown RBP27.09■■□□□ 1.93
PRKCH-216ENST00000555542 EYA4O95677 639 aa27.09■■□□□ 1.93
PRKCH-216ENST00000555542 POMCP01189 267 aa27.09■■□□□ 1.93
PRKCH-216ENST00000555542 GALTP07902 379 aa27.09■■□□□ 1.93
PRKCH-216ENST00000555542 ARF4P18085 180 aaPredicted RBP27.09■■□□□ 1.93
PRKCH-216ENST00000555542 MUTP22033 750 aa27.09■■□□□ 1.93
PRKCH-216ENST00000555542 TOB1P50616 345 aaPredicted RBP27.09■■□□□ 1.93
PRKCH-216ENST00000555542 ZNF280BQ86YH2 543 aa27.09■■□□□ 1.93
PRKCH-216ENST00000555542 VPS52Q8N1B4 723 aa27.09■■□□□ 1.93
PRKCH-216ENST00000555542 C4orf32Q8N8J7 132 aa27.09■■□□□ 1.93
PRKCH-216ENST00000555542 SMG8Q8ND04 991 aaKnown RBP27.09■■□□□ 1.93
PRKCH-216ENST00000555542 VN1R2Q8NFZ6 395 aa27.09■■□□□ 1.93
PRKCH-216ENST00000555542 SNX29Q8TEQ0 813 aa27.09■■□□□ 1.93
PRKCH-216ENST00000555542 IGSF21Q96ID5 467 aa27.09■■□□□ 1.93
PRKCH-216ENST00000555542 LAD1O00515 517 aa27.08■■□□□ 1.93
PRKCH-216ENST00000555542 SLC11A1P49279 550 aa27.08■■□□□ 1.93
PRKCH-216ENST00000555542 TMEM173Q86WV6 379 aaPredicted RBP27.08■■□□□ 1.93
PRKCH-216ENST00000555542 MRPL43Q8N983 215 aaKnown RBP27.08■■□□□ 1.93
PRKCH-216ENST00000555542 TBC1D32Q96NH3 1257 aa27.08■■□□□ 1.93
PRKCH-216ENST00000555542 KIAA1024Q9UPX6 916 aa27.08■■□□□ 1.93
PRKCH-216ENST00000555542 SMC3Q9UQE7 1217 aa27.08■■□□□ 1.93
PRKCH-216ENST00000555542 HES2Q9Y543 173 aa27.08■■□□□ 1.93
PRKCH-216ENST00000555542 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.07■■□□□ 1.92
PRKCH-216ENST00000555542 B4GALT5O43286 388 aa27.07■■□□□ 1.92
PRKCH-216ENST00000555542 CXCL14O95715 111 aa27.07■■□□□ 1.92
PRKCH-216ENST00000555542 PDIA5Q14554 519 aa27.07■■□□□ 1.92
PRKCH-216ENST00000555542 AMHR2Q16671 573 aa27.07■■□□□ 1.92
PRKCH-216ENST00000555542 DDX53Q86TM3 631 aaKnown RBP27.07■■□□□ 1.92
PRKCH-216ENST00000555542 C2orf40Q9H1Z8 148 aa27.07■■□□□ 1.92
PRKCH-216ENST00000555542 BHMT2Q9H2M3 363 aa27.07■■□□□ 1.92
PRKCH-216ENST00000555542 PRMT7Q9NVM4 692 aaPredicted RBP27.07■■□□□ 1.92
PRKCH-216ENST00000555542 USP15Q9Y4E8 981 aaPredicted RBP27.07■■□□□ 1.92
PRKCH-216ENST00000555542 C2orf71A6NGG8 1288 aa27.06■■□□□ 1.92
PRKCH-216ENST00000555542 PI4K2BG5E9Z4 385 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms