RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 TAAR9Q96RI9 348 aa6.97□□□□□ -1.29
CKS1BP1-201ENST00000555221 CD320Q9NPF0 282 aa6.97□□□□□ -1.29
CKS1BP1-201ENST00000555221 DMRT3Q9NQL9 472 aa6.97□□□□□ -1.29
CKS1BP1-201ENST00000555221 INTUQ9ULD6 942 aa6.97□□□□□ -1.29
CKS1BP1-201ENST00000555221 IPPQ9Y573 584 aa6.97□□□□□ -1.29
CKS1BP1-201ENST00000555221 C9orf118A6NHY6 69 aa6.96□□□□□ -1.3
CKS1BP1-201ENST00000555221 CTNND1O60716 968 aaKnown RBP6.96□□□□□ -1.3
CKS1BP1-201ENST00000555221 TMEM127O75204 238 aa6.96□□□□□ -1.3
CKS1BP1-201ENST00000555221 KRT1P04264 644 aa6.96□□□□□ -1.3
CKS1BP1-201ENST00000555221 GAAP10253 952 aa6.96□□□□□ -1.3
CKS1BP1-201ENST00000555221 HNRNPLP14866 589 aaKnown RBP eCLIP6.96□□□□□ -1.3
CKS1BP1-201ENST00000555221 CTSSP25774 331 aa6.96□□□□□ -1.3
CKS1BP1-201ENST00000555221 MRE11P49959 708 aa6.96□□□□□ -1.3
CKS1BP1-201ENST00000555221 NOMO1Q15155 1222 aa6.96□□□□□ -1.3
CKS1BP1-201ENST00000555221 ZNF827Q17R98 1081 aa6.96□□□□□ -1.3
CKS1BP1-201ENST00000555221 C19orf54Q5BKX5 351 aa6.96□□□□□ -1.3
CKS1BP1-201ENST00000555221 PPP4R3AQ6IN85 833 aa6.96□□□□□ -1.3
CKS1BP1-201ENST00000555221 SLC4A10Q6U841 1118 aa6.96□□□□□ -1.3
CKS1BP1-201ENST00000555221 TAS1R1Q7RTX1 841 aa6.96□□□□□ -1.3
CKS1BP1-201ENST00000555221 TMEM151BQ8IW70 566 aa6.96□□□□□ -1.3
CKS1BP1-201ENST00000555221 CARFQ8N187 725 aa6.96□□□□□ -1.3
CKS1BP1-201ENST00000555221 PRR18Q8N4B5 295 aa6.96□□□□□ -1.3
CKS1BP1-201ENST00000555221 DACT3Q96B18 629 aaPredicted RBP6.96□□□□□ -1.3
CKS1BP1-201ENST00000555221 C1GALT1C1Q96EU7 318 aa6.96□□□□□ -1.3
CKS1BP1-201ENST00000555221 MVB12AQ96EY5 273 aa6.96□□□□□ -1.3
CKS1BP1-201ENST00000555221 C7orf25Q9BPX7 421 aa6.96□□□□□ -1.3
CKS1BP1-201ENST00000555221 SPATA25Q9BR10 227 aa6.96□□□□□ -1.3
CKS1BP1-201ENST00000555221 LIMCH1Q9UPQ0 1083 aa6.96□□□□□ -1.3
CKS1BP1-201ENST00000555221 AKR1B10O60218 316 aa6.95□□□□□ -1.3
CKS1BP1-201ENST00000555221 PLIN1O60240 522 aa6.95□□□□□ -1.3
CKS1BP1-201ENST00000555221 PRAMEF4O60810 478 aa6.95□□□□□ -1.3
CKS1BP1-201ENST00000555221 ENDOD1O94919 500 aa6.95□□□□□ -1.3
CKS1BP1-201ENST00000555221 MYL1P05976 194 aa6.95□□□□□ -1.3
CKS1BP1-201ENST00000555221 C1QTNF9P0C862 333 aa6.95□□□□□ -1.3
CKS1BP1-201ENST00000555221 AFF3P51826 1226 aaKnown RBP6.95□□□□□ -1.3
CKS1BP1-201ENST00000555221 LINC00310P59036 64 aa6.95□□□□□ -1.3
CKS1BP1-201ENST00000555221 PPP3CAQ08209 521 aa6.95□□□□□ -1.3
CKS1BP1-201ENST00000555221 ZNF267Q14586 743 aaPredicted RBP6.95□□□□□ -1.3
CKS1BP1-201ENST00000555221 USP10Q14694 798 aaKnown RBP6.95□□□□□ -1.3
CKS1BP1-201ENST00000555221 PCOLCEQ15113 449 aa6.95□□□□□ -1.3
CKS1BP1-201ENST00000555221 PGS1Q32NB8 556 aa6.95□□□□□ -1.3
CKS1BP1-201ENST00000555221 ZMAT1Q5H9K5 638 aa6.95□□□□□ -1.3
CKS1BP1-201ENST00000555221 CLEC14AQ86T13 490 aa6.95□□□□□ -1.3
CKS1BP1-201ENST00000555221 GRAMD1CQ8IYS0 662 aa6.95□□□□□ -1.3
CKS1BP1-201ENST00000555221 MARCH10Q8NA82 808 aaPredicted RBP6.95□□□□□ -1.3
CKS1BP1-201ENST00000555221 DIS3LQ8TF46 1054 aaKnown RBP6.95□□□□□ -1.3
CKS1BP1-201ENST00000555221 SNX33Q8WV41 574 aa6.95□□□□□ -1.3
CKS1BP1-201ENST00000555221 GCDHQ92947 438 aaPredicted RBP6.95□□□□□ -1.3
CKS1BP1-201ENST00000555221 FAM193BQ96PV7 902 aaPredicted RBP6.95□□□□□ -1.3
CKS1BP1-201ENST00000555221 OR10A2Q9H208 303 aa6.95□□□□□ -1.3
CKS1BP1-201ENST00000555221 C14orf93Q9H972 538 aaKnown RBP6.95□□□□□ -1.3
CKS1BP1-201ENST00000555221 ADAM29Q9UKF5 820 aa6.95□□□□□ -1.3
CKS1BP1-201ENST00000555221 FAM184BQ9ULE4 1060 aa6.95□□□□□ -1.3
CKS1BP1-201ENST00000555221 CFAP20Q9Y6A4 193 aaKnown RBP6.95□□□□□ -1.3
CKS1BP1-201ENST00000555221 EDNRBP24530 442 aa6.94□□□□□ -1.3
CKS1BP1-201ENST00000555221 ECHS1P30084 290 aa6.94□□□□□ -1.3
CKS1BP1-201ENST00000555221 WNT3AP56704 352 aa6.94□□□□□ -1.3
CKS1BP1-201ENST00000555221 ADAM15Q13444 863 aa6.94□□□□□ -1.3
CKS1BP1-201ENST00000555221 UBE3CQ15386 1083 aa6.94□□□□□ -1.3
CKS1BP1-201ENST00000555221 KCNA10Q16322 511 aa6.94□□□□□ -1.3
CKS1BP1-201ENST00000555221 MCTP2Q6DN12 878 aa6.94□□□□□ -1.3
CKS1BP1-201ENST00000555221 LARP4Q71RC2 724 aaKnown RBP eCLIP6.94□□□□□ -1.3
CKS1BP1-201ENST00000555221 TXNDC5Q8NBS9 432 aaKnown RBP6.94□□□□□ -1.3
CKS1BP1-201ENST00000555221 PLA2G15Q8NCC3 412 aa6.94□□□□□ -1.3
CKS1BP1-201ENST00000555221 PIK3C3Q8NEB9 887 aa6.94□□□□□ -1.3
CKS1BP1-201ENST00000555221 ADAMTS17Q8TE56 1095 aa6.94□□□□□ -1.3
CKS1BP1-201ENST00000555221 LCORQ96JN0 433 aaPredicted RBP6.94□□□□□ -1.3
CKS1BP1-201ENST00000555221 ARNT2Q9HBZ2 717 aa6.94□□□□□ -1.3
CKS1BP1-201ENST00000555221 RNF114Q9Y508 228 aa6.94□□□□□ -1.3
CKS1BP1-201ENST00000555221 CTDP1Q9Y5B0 961 aaPredicted RBP6.94□□□□□ -1.3
CKS1BP1-201ENST00000555221 H3BML4 177 aa6.93□□□□□ -1.3
CKS1BP1-201ENST00000555221 FFAR3O14843 346 aa6.93□□□□□ -1.3
CKS1BP1-201ENST00000555221 PAX4O43316 350 aa6.93□□□□□ -1.3
CKS1BP1-201ENST00000555221 CSF2RBP32927 897 aa6.93□□□□□ -1.3
CKS1BP1-201ENST00000555221 RAP1GAPP47736 663 aa6.93□□□□□ -1.3
CKS1BP1-201ENST00000555221 PKN1Q16512 942 aa6.93□□□□□ -1.3
CKS1BP1-201ENST00000555221 MST1LQ2TV78 715 aa6.93□□□□□ -1.3
CKS1BP1-201ENST00000555221 C3orf36Q3SXR2 165 aa6.93□□□□□ -1.3
CKS1BP1-201ENST00000555221 THEMIS2Q5TEJ8 643 aa6.93□□□□□ -1.3
CKS1BP1-201ENST00000555221 AGBL4Q5VU57 503 aa6.93□□□□□ -1.3
CKS1BP1-201ENST00000555221 CAMKK1Q8N5S9 505 aa6.93□□□□□ -1.3
CKS1BP1-201ENST00000555221 LINC01356Q8N9X3 169 aa6.93□□□□□ -1.3
CKS1BP1-201ENST00000555221 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.93□□□□□ -1.3
CKS1BP1-201ENST00000555221 ZNF480Q8WV37 535 aa6.93□□□□□ -1.3
CKS1BP1-201ENST00000555221 DPF2Q92785 391 aa6.93□□□□□ -1.3
CKS1BP1-201ENST00000555221 TTC17Q96AE7 1141 aa6.93□□□□□ -1.3
CKS1BP1-201ENST00000555221 SLC7A6OSQ96CW6 309 aaPredicted RBP6.93□□□□□ -1.3
CKS1BP1-201ENST00000555221 FRMPD2Q68DX3 1309 aaPredicted RBP6.93□□□□□ -1.3
CKS1BP1-201ENST00000555221 MTSS1O43312 755 aa6.92□□□□□ -1.3
CKS1BP1-201ENST00000555221 SGTAO43765 313 aa6.92□□□□□ -1.3
CKS1BP1-201ENST00000555221 ALDH1A2O94788 518 aa6.92□□□□□ -1.3
CKS1BP1-201ENST00000555221 MAP4K4O95819 1239 aaPredicted RBP6.92□□□□□ -1.3
CKS1BP1-201ENST00000555221 IL12RB1P42701 662 aa6.92□□□□□ -1.3
CKS1BP1-201ENST00000555221 PURAQ00577 322 aaKnown RBP6.92□□□□□ -1.3
CKS1BP1-201ENST00000555221 GRM3Q14832 879 aa6.92□□□□□ -1.3
CKS1BP1-201ENST00000555221 ZNF568Q3ZCX4 644 aa6.92□□□□□ -1.3
CKS1BP1-201ENST00000555221 OGFOD2Q6N063 350 aa6.92□□□□□ -1.3
CKS1BP1-201ENST00000555221 ABHD15Q6UXT9 468 aa6.92□□□□□ -1.3
CKS1BP1-201ENST00000555221 RALYLQ86SE5 291 aaKnown RBP6.92□□□□□ -1.3
CKS1BP1-201ENST00000555221 TTC7BQ86TV6 843 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms