RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 NEK4P51957 841 aa7.26□□□□□ -1.25
VRK1-203ENST00000555067 DSG1Q02413 1049 aa7.26□□□□□ -1.25
VRK1-203ENST00000555067 DCAF17Q5H9S7 520 aaPredicted RBP7.26□□□□□ -1.25
VRK1-203ENST00000555067 UNQ6494/PRO21346Q6UXR6 183 aa7.26□□□□□ -1.25
VRK1-203ENST00000555067 CERS3Q8IU89 383 aa7.26□□□□□ -1.25
VRK1-203ENST00000555067 ATXN2LQ8WWM7 1075 aaKnown RBP7.26□□□□□ -1.25
VRK1-203ENST00000555067 PCDHB6Q9Y5E3 794 aa7.26□□□□□ -1.25
VRK1-203ENST00000555067 XDHP47989 1333 aa7.26□□□□□ -1.25
VRK1-203ENST00000555067 A0A0A6YYK5 440 aaPredicted RBP7.25□□□□□ -1.25
VRK1-203ENST00000555067 ST20-MTHFSA0A0A6YYL1 179 aa7.25□□□□□ -1.25
VRK1-203ENST00000555067 GNAT2P19087 354 aa7.25□□□□□ -1.25
VRK1-203ENST00000555067 GPR158Q5T848 1215 aa7.25□□□□□ -1.25
VRK1-203ENST00000555067 ESPNLQ6ZVH7 1005 aa7.25□□□□□ -1.25
VRK1-203ENST00000555067 APBB1IPQ7Z5R6 666 aaPredicted RBP7.25□□□□□ -1.25
VRK1-203ENST00000555067 LRRTM3Q86VH5 581 aa7.25□□□□□ -1.25
VRK1-203ENST00000555067 ELOA2Q8IYF1 753 aaPredicted RBP7.25□□□□□ -1.25
VRK1-203ENST00000555067 MB21D1Q8N884 522 aa7.25□□□□□ -1.25
VRK1-203ENST00000555067 CDYL2Q8N8U2 506 aa7.25□□□□□ -1.25
VRK1-203ENST00000555067 PPP1R14CQ8TAE6 165 aa7.25□□□□□ -1.25
VRK1-203ENST00000555067 MNTQ99583 582 aa7.25□□□□□ -1.25
VRK1-203ENST00000555067 SOX7Q9BT81 388 aa7.25□□□□□ -1.25
VRK1-203ENST00000555067 CD2APQ9Y5K6 639 aa7.25□□□□□ -1.25
VRK1-203ENST00000555067 MYPNQ86TC9 1320 aa7.25□□□□□ -1.25
VRK1-203ENST00000555067 GAAP10253 952 aa7.24□□□□□ -1.25
VRK1-203ENST00000555067 RABL3Q5HYI8 236 aa7.24□□□□□ -1.25
VRK1-203ENST00000555067 NAIF1Q69YI7 327 aaPredicted RBP7.24□□□□□ -1.25
VRK1-203ENST00000555067 C16orf86Q6ZW13 317 aa7.24□□□□□ -1.25
VRK1-203ENST00000555067 CHTF18Q8WVB6 975 aa7.24□□□□□ -1.25
VRK1-203ENST00000555067 ST8SIA2Q92186 375 aa7.24□□□□□ -1.25
VRK1-203ENST00000555067 APPBP2Q92624 585 aa7.24□□□□□ -1.25
VRK1-203ENST00000555067 NINJ1Q92982 152 aa7.24□□□□□ -1.25
VRK1-203ENST00000555067 FERMT2Q96AC1 680 aa7.24□□□□□ -1.25
VRK1-203ENST00000555067 RNPC3Q96LT9 517 aaKnown RBP7.24□□□□□ -1.25
VRK1-203ENST00000555067 ZNF891A8MT65 544 aaPredicted RBP7.23□□□□□ -1.25
VRK1-203ENST00000555067 PCDH8O95206 1070 aa7.23□□□□□ -1.25
VRK1-203ENST00000555067 KPNA1P52294 538 aaPredicted RBP7.23□□□□□ -1.25
VRK1-203ENST00000555067 OCRLQ01968 901 aa7.23□□□□□ -1.25
VRK1-203ENST00000555067 C1QL3Q5VWW1 255 aa7.23□□□□□ -1.25
VRK1-203ENST00000555067 NXPE1Q8N323 547 aa7.23□□□□□ -1.25
VRK1-203ENST00000555067 PPM1KQ8N3J5 372 aa7.23□□□□□ -1.25
VRK1-203ENST00000555067 SLC25A43Q8WUT9 341 aaPredicted RBP7.23□□□□□ -1.25
VRK1-203ENST00000555067 HAS1Q92839 578 aa7.23□□□□□ -1.25
VRK1-203ENST00000555067 NRDE2Q9H7Z3 1164 aa7.23□□□□□ -1.25
VRK1-203ENST00000555067 THG1LQ9NWX6 298 aaKnown RBP7.23□□□□□ -1.25
VRK1-203ENST00000555067 TRPS1Q9UHF7 1281 aa7.23□□□□□ -1.25
VRK1-203ENST00000555067 MSRAQ9UJ68 235 aa7.23□□□□□ -1.25
VRK1-203ENST00000555067 FAM83GA6ND36 823 aa7.22□□□□□ -1.25
VRK1-203ENST00000555067 ELL2O00472 640 aaPredicted RBP7.22□□□□□ -1.25
VRK1-203ENST00000555067 NRP2O60462 931 aa7.22□□□□□ -1.25
VRK1-203ENST00000555067 PPFIA4O75335 1185 aa7.22□□□□□ -1.25
VRK1-203ENST00000555067 ALDH1A2O94788 518 aa7.22□□□□□ -1.25
VRK1-203ENST00000555067 GPR15P49685 360 aa7.22□□□□□ -1.25
VRK1-203ENST00000555067 PHC1P78364 1004 aa7.22□□□□□ -1.25
VRK1-203ENST00000555067 CSRP2Q16527 193 aa7.22□□□□□ -1.25
VRK1-203ENST00000555067 PTPROQ16827 1216 aa7.22□□□□□ -1.25
VRK1-203ENST00000555067 CCDC178Q5BJE1 867 aa7.22□□□□□ -1.25
VRK1-203ENST00000555067 MRGPREQ86SM8 312 aa7.22□□□□□ -1.25
VRK1-203ENST00000555067 JAZF1Q86VZ6 243 aa7.22□□□□□ -1.25
VRK1-203ENST00000555067 PRIMA1Q86XR5 153 aa7.22□□□□□ -1.25
VRK1-203ENST00000555067 MTFR1LQ9H019 292 aa7.22□□□□□ -1.25
VRK1-203ENST00000555067 RPS6KA4O75676 772 aa7.21□□□□□ -1.26
VRK1-203ENST00000555067 GCP02774 474 aa7.21□□□□□ -1.26
VRK1-203ENST00000555067 IGBP1P78318 339 aa7.21□□□□□ -1.26
VRK1-203ENST00000555067 FSTL1Q12841 308 aa7.21□□□□□ -1.26
VRK1-203ENST00000555067 SART3Q15020 963 aaKnown RBP7.21□□□□□ -1.26
VRK1-203ENST00000555067 CNNM4Q6P4Q7 775 aa7.21□□□□□ -1.26
VRK1-203ENST00000555067 AHI1Q8N157 1196 aa7.21□□□□□ -1.26
VRK1-203ENST00000555067 SYNE4Q8N205 404 aa7.21□□□□□ -1.26
VRK1-203ENST00000555067 ZNF276Q8N554 614 aa7.21□□□□□ -1.26
VRK1-203ENST00000555067 SMC1BQ8NDV3 1235 aa7.21□□□□□ -1.26
VRK1-203ENST00000555067 PIK3C3Q8NEB9 887 aa7.21□□□□□ -1.26
VRK1-203ENST00000555067 NTN5Q8WTR8 489 aaPredicted RBP7.21□□□□□ -1.26
VRK1-203ENST00000555067 LENG9Q96B70 501 aa7.21□□□□□ -1.26
VRK1-203ENST00000555067 PGBD4Q96DM1 585 aa7.21□□□□□ -1.26
VRK1-203ENST00000555067 PDCD2LQ9BRP1 358 aa7.21□□□□□ -1.26
VRK1-203ENST00000555067 ENKD1Q9H0I2 346 aa7.21□□□□□ -1.26
VRK1-203ENST00000555067 FANCLQ9NW38 375 aa7.21□□□□□ -1.26
VRK1-203ENST00000555067 ING3Q9NXR8 418 aa7.21□□□□□ -1.26
VRK1-203ENST00000555067 hCG_2014768A0A024R1R8 64 aa7.2□□□□□ -1.26
VRK1-203ENST00000555067 TGM5O43548 720 aa7.2□□□□□ -1.26
VRK1-203ENST00000555067 FAM20BO75063 409 aa7.2□□□□□ -1.26
VRK1-203ENST00000555067 STC2O76061 302 aa7.2□□□□□ -1.26
VRK1-203ENST00000555067 SEC24DO94855 1032 aaPredicted RBP7.2□□□□□ -1.26
VRK1-203ENST00000555067 LMNAP02545 664 aaKnown RBP7.2□□□□□ -1.26
VRK1-203ENST00000555067 PFKMP08237 780 aa7.2□□□□□ -1.26
VRK1-203ENST00000555067 XPAP23025 273 aaPredicted RBP7.2□□□□□ -1.26
VRK1-203ENST00000555067 WNT3AP56704 352 aa7.2□□□□□ -1.26
VRK1-203ENST00000555067 METTL24Q5JXM2 366 aa7.2□□□□□ -1.26
VRK1-203ENST00000555067 ZBTB41Q5SVQ8 909 aa7.2□□□□□ -1.26
VRK1-203ENST00000555067 NIM1KQ8IY84 436 aa7.2□□□□□ -1.26
VRK1-203ENST00000555067 ZNF610Q8N9Z0 462 aa7.2□□□□□ -1.26
VRK1-203ENST00000555067 GPR150Q8NGU9 434 aa7.2□□□□□ -1.26
VRK1-203ENST00000555067 ZNF764Q96H86 408 aaPredicted RBP7.2□□□□□ -1.26
VRK1-203ENST00000555067 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.2□□□□□ -1.26
VRK1-203ENST00000555067 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.2□□□□□ -1.26
VRK1-203ENST00000555067 PLAAQ9Y263 795 aa7.2□□□□□ -1.26
VRK1-203ENST00000555067 GRXCR1A8MXD5 290 aa7.19□□□□□ -1.26
VRK1-203ENST00000555067 LY86O95711 162 aa7.19□□□□□ -1.26
VRK1-203ENST00000555067 LSP1P33241 339 aa7.19□□□□□ -1.26
VRK1-203ENST00000555067 SCNN1BP51168 640 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms