RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 GABBR1Q9UBS5 961 aa23.04■■□□□ 1.28
ARHGEF40-204ENST00000555038 PPP1R1BQ9UD71 204 aaPredicted RBP23.04■■□□□ 1.28
ARHGEF40-204ENST00000555038 ZNF541Q9H0D2 1346 aa23.03■■□□□ 1.28
ARHGEF40-204ENST00000555038 ZBTB48P10074 688 aaPredicted RBP23.03■■□□□ 1.28
ARHGEF40-204ENST00000555038 ARHGAP44Q17R89 818 aa23.03■■□□□ 1.28
ARHGEF40-204ENST00000555038 RASGEF1CQ8N431 466 aa23.03■■□□□ 1.28
ARHGEF40-204ENST00000555038 KCNN1Q92952 543 aa23.03■■□□□ 1.28
ARHGEF40-204ENST00000555038 CEP170P1Q96L14 293 aa23.03■■□□□ 1.28
ARHGEF40-204ENST00000555038 UBE2TQ9NPD8 197 aaPredicted RBP23.03■■□□□ 1.28
ARHGEF40-204ENST00000555038 PACSIN2Q9UNF0 486 aaPredicted RBP23.03■■□□□ 1.28
ARHGEF40-204ENST00000555038 ARID2Q68CP9 1835 aa23.02■■□□□ 1.28
ARHGEF40-204ENST00000555038 PFASO15067 1338 aa23.02■■□□□ 1.28
ARHGEF40-204ENST00000555038 TMEM150BA6NC51 233 aa23.02■■□□□ 1.28
ARHGEF40-204ENST00000555038 CCDC169A6NNP5 214 aa23.02■■□□□ 1.28
ARHGEF40-204ENST00000555038 SPATA31C2B4DYI2 1134 aa23.02■■□□□ 1.28
ARHGEF40-204ENST00000555038 TISP43B9A030 160 aa23.02■■□□□ 1.28
ARHGEF40-204ENST00000555038 CCDC188H7C350 402 aa23.02■■□□□ 1.28
ARHGEF40-204ENST00000555038 PGRMC1O00264 195 aaKnown RBP23.02■■□□□ 1.28
ARHGEF40-204ENST00000555038 FOXN3O00409 490 aaPredicted RBP23.02■■□□□ 1.28
ARHGEF40-204ENST00000555038 STBD1O95210 358 aa23.02■■□□□ 1.28
ARHGEF40-204ENST00000555038 GCLMP48507 274 aa23.02■■□□□ 1.28
ARHGEF40-204ENST00000555038 PAK2Q13177 524 aa23.02■■□□□ 1.28
ARHGEF40-204ENST00000555038 SNRNP35Q16560 246 aaKnown RBP23.02■■□□□ 1.28
ARHGEF40-204ENST00000555038 NT5DC3Q86UY8 548 aa23.02■■□□□ 1.28
ARHGEF40-204ENST00000555038 RHOT2Q8IXI1 618 aa23.02■■□□□ 1.28
ARHGEF40-204ENST00000555038 SCFD2Q8WU76 684 aa23.02■■□□□ 1.28
ARHGEF40-204ENST00000555038 HES6Q96HZ4 224 aa23.02■■□□□ 1.28
ARHGEF40-204ENST00000555038 FBXL18Q96ME1 805 aa23.02■■□□□ 1.28
ARHGEF40-204ENST00000555038 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.02■■□□□ 1.282e-7■□□□□ 11
ARHGEF40-204ENST00000555038 TMEM117Q9H0C3 514 aa23.02■■□□□ 1.28
ARHGEF40-204ENST00000555038 A1CFQ9NQ94 594 aaKnown RBP23.02■■□□□ 1.28
ARHGEF40-204ENST00000555038 SLC9A2Q9UBY0 812 aa23.02■■□□□ 1.28
ARHGEF40-204ENST00000555038 AMFRQ9UKV5 643 aa23.02■■□□□ 1.28
ARHGEF40-204ENST00000555038 FAN1Q9Y2M0 1017 aa23.02■■□□□ 1.28
ARHGEF40-204ENST00000555038 COQ4Q9Y3A0 265 aa23.02■■□□□ 1.28
ARHGEF40-204ENST00000555038 CCDC66A2RUB6 948 aa23.01■■□□□ 1.27
ARHGEF40-204ENST00000555038 DENND3A2RUS2 1198 aa23.01■■□□□ 1.27
ARHGEF40-204ENST00000555038 CNGA1P29973 690 aa23.01■■□□□ 1.27
ARHGEF40-204ENST00000555038 SLC7A5Q01650 507 aa23.01■■□□□ 1.27
ARHGEF40-204ENST00000555038 CLUL1Q15846 466 aa23.01■■□□□ 1.27
ARHGEF40-204ENST00000555038 MIS18BP1Q6P0N0 1132 aa23.01■■□□□ 1.27
ARHGEF40-204ENST00000555038 SND1Q7KZF4 910 aaKnown RBP eCLIP23.01■■□□□ 1.27
ARHGEF40-204ENST00000555038 DAAM2Q86T65 1068 aa23.01■■□□□ 1.27
ARHGEF40-204ENST00000555038 CHST13Q8NET6 341 aa23.01■■□□□ 1.27
ARHGEF40-204ENST00000555038 DNERQ8NFT8 737 aa23.01■■□□□ 1.27
ARHGEF40-204ENST00000555038 SGIP1Q9BQI5 828 aa23.01■■□□□ 1.27
ARHGEF40-204ENST00000555038 PDLIM7Q9NR12 457 aa23.01■■□□□ 1.27
ARHGEF40-204ENST00000555038 GPRC5DQ9NZD1 345 aa23.01■■□□□ 1.27
ARHGEF40-204ENST00000555038 TTC7AQ9ULT0 858 aaPredicted RBP23.01■■□□□ 1.27
ARHGEF40-204ENST00000555038 AFG3L2Q9Y4W6 797 aa23.01■■□□□ 1.27
ARHGEF40-204ENST00000555038 WDR81Q562E7 1941 aa23.01■■□□□ 1.27
ARHGEF40-204ENST00000555038 ZNF862O60290 1169 aa23.01■■□□□ 1.27
ARHGEF40-204ENST00000555038 RGS20O76081 388 aa23.01■■□□□ 1.27
ARHGEF40-204ENST00000555038 SYF2O95926 243 aaKnown RBP23.01■■□□□ 1.27
ARHGEF40-204ENST00000555038 PPATQ06203 517 aa23.01■■□□□ 1.27
ARHGEF40-204ENST00000555038 ALS2CLQ60I27 953 aa23.01■■□□□ 1.27
ARHGEF40-204ENST00000555038 KRT39Q6A163 491 aa23.01■■□□□ 1.27
ARHGEF40-204ENST00000555038 GSPT2Q8IYD1 628 aaKnown RBP23.01■■□□□ 1.27
ARHGEF40-204ENST00000555038 SLC35G2Q8TBE7 412 aa23.01■■□□□ 1.27
ARHGEF40-204ENST00000555038 TMEM8AQ9HCN3 771 aa23.01■■□□□ 1.27
ARHGEF40-204ENST00000555038 IGSF9BQ9UPX0 1349 aa23■■□□□ 1.27
ARHGEF40-204ENST00000555038 GOLGA6BA6NDN3 693 aa23■■□□□ 1.27
ARHGEF40-204ENST00000555038 CEP104O60308 925 aa23■■□□□ 1.27
ARHGEF40-204ENST00000555038 HEXIM1O94992 359 aaKnown RBP23■■□□□ 1.27
ARHGEF40-204ENST00000555038 GARTP22102 1010 aa23■■□□□ 1.27
ARHGEF40-204ENST00000555038 ADSSP30520 456 aa23■■□□□ 1.27
ARHGEF40-204ENST00000555038 ICAM3P32942 547 aa23■■□□□ 1.27
ARHGEF40-204ENST00000555038 DNA2P51530 1060 aa23■■□□□ 1.27
ARHGEF40-204ENST00000555038 BRDTQ58F21 947 aaPredicted RBP23■■□□□ 1.27
ARHGEF40-204ENST00000555038 ABHD15Q6UXT9 468 aa23■■□□□ 1.27
ARHGEF40-204ENST00000555038 METTL13Q8N6R0 699 aa23■■□□□ 1.27
ARHGEF40-204ENST00000555038 PLEKHO2Q8TD55 490 aa23■■□□□ 1.27
ARHGEF40-204ENST00000555038 FAM81BQ96LP2 452 aa23■■□□□ 1.27
ARHGEF40-204ENST00000555038 MFSD14AQ96MC6 490 aa23■■□□□ 1.27
ARHGEF40-204ENST00000555038 KRT12Q99456 494 aa23■■□□□ 1.27
ARHGEF40-204ENST00000555038 ISCUQ9H1K1 167 aa23■■□□□ 1.27
ARHGEF40-204ENST00000555038 ATP6V0A4Q9HBG4 840 aa23■■□□□ 1.27
ARHGEF40-204ENST00000555038 KIAA1217Q5T5P2 1943 aa22.99■■□□□ 1.27
ARHGEF40-204ENST00000555038 SPDYE16A6NNV3 312 aaPredicted RBP22.99■■□□□ 1.27
ARHGEF40-204ENST00000555038 TMCO5BA8MYB1 307 aa22.99■■□□□ 1.27
ARHGEF40-204ENST00000555038 ADRB2P07550 413 aa22.99■■□□□ 1.27
ARHGEF40-204ENST00000555038 MFAP3P55082 362 aa22.99■■□□□ 1.27
ARHGEF40-204ENST00000555038 XKR3Q5GH77 459 aa22.99■■□□□ 1.27
ARHGEF40-204ENST00000555038 ARHGEF19Q8IW93 802 aa22.99■■□□□ 1.27
ARHGEF40-204ENST00000555038 GOLGA6L1Q8N7Z2 621 aa22.99■■□□□ 1.27
ARHGEF40-204ENST00000555038 PARD3BQ8TEW8 1205 aa22.99■■□□□ 1.27
ARHGEF40-204ENST00000555038 IFT74Q96LB3 600 aa22.99■■□□□ 1.27
ARHGEF40-204ENST00000555038 SH2D3AQ9BRG2 576 aa22.99■■□□□ 1.27
ARHGEF40-204ENST00000555038 GGA3Q9NZ52 723 aa22.99■■□□□ 1.27
ARHGEF40-204ENST00000555038 SSC5DA1L4H1 1573 aa22.99■■□□□ 1.27
ARHGEF40-204ENST00000555038 ANKRD63C9JTQ0 380 aa22.99■■□□□ 1.27
ARHGEF40-204ENST00000555038 LRRN2O75325 713 aa22.99■■□□□ 1.27
ARHGEF40-204ENST00000555038 GPC3P51654 580 aa22.99■■□□□ 1.27
ARHGEF40-204ENST00000555038 ACTR2P61160 394 aa22.99■■□□□ 1.27
ARHGEF40-204ENST00000555038 SWSAP1Q6NVH7 229 aa22.99■■□□□ 1.27
ARHGEF40-204ENST00000555038 FAM71AQ8IYT1 594 aa22.99■■□□□ 1.27
ARHGEF40-204ENST00000555038 GPC2Q8N158 579 aa22.99■■□□□ 1.27
ARHGEF40-204ENST00000555038 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.99■■□□□ 1.27
ARHGEF40-204ENST00000555038 TRPM4Q8TD43 1214 aa22.99■■□□□ 1.27
ARHGEF40-204ENST00000555038 CYP26B1Q9NR63 512 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms