RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 PTPN21Q16825 1174 aa13.67□□□□□ -0.22
MTHFD1-207ENST00000554677 GLB1LQ6UWU2 654 aa13.67□□□□□ -0.22
MTHFD1-207ENST00000554677 SRGAP1Q7Z6B7 1085 aa13.67□□□□□ -0.22
MTHFD1-207ENST00000554677 POTEDQ86YR6 584 aa13.67□□□□□ -0.22
MTHFD1-207ENST00000554677 C12orf76Q8N812 135 aaPredicted RBP13.67□□□□□ -0.22
MTHFD1-207ENST00000554677 DYDC2Q96IM9 177 aa13.67□□□□□ -0.22
MTHFD1-207ENST00000554677 PHOX2BQ99453 314 aa13.67□□□□□ -0.22
MTHFD1-207ENST00000554677 LXNQ9BS40 222 aa13.67□□□□□ -0.22
MTHFD1-207ENST00000554677 INPP5FQ9Y2H2 1132 aa13.67□□□□□ -0.22
MTHFD1-207ENST00000554677 PPME1Q9Y570 386 aa13.67□□□□□ -0.22
MTHFD1-207ENST00000554677 PTPRZ1P23471 2315 aaPredicted RBP13.67□□□□□ -0.22
MTHFD1-207ENST00000554677 DOCK8Q8NF50 2099 aa13.67□□□□□ -0.22
MTHFD1-207ENST00000554677 C2CD4DB7Z1M9 353 aa13.66□□□□□ -0.22
MTHFD1-207ENST00000554677 DKC1O60832 514 aaKnown RBP eCLIP13.66□□□□□ -0.22
MTHFD1-207ENST00000554677 CDKL5O76039 1030 aa13.66□□□□□ -0.22
MTHFD1-207ENST00000554677 SLITRK3O94933 977 aa13.66□□□□□ -0.22
MTHFD1-207ENST00000554677 WEE2P0C1S8 567 aa13.66□□□□□ -0.22
MTHFD1-207ENST00000554677 EPCAMP16422 314 aa13.66□□□□□ -0.22
MTHFD1-207ENST00000554677 YWHABP31946 246 aaKnown RBP13.66□□□□□ -0.22
MTHFD1-207ENST00000554677 RFC5P40937 340 aa13.66□□□□□ -0.22
MTHFD1-207ENST00000554677 RAB27AP51159 221 aa13.66□□□□□ -0.22
MTHFD1-207ENST00000554677 AK2P54819 239 aa13.66□□□□□ -0.22
MTHFD1-207ENST00000554677 ITIH3Q06033 890 aa13.66□□□□□ -0.22
MTHFD1-207ENST00000554677 TCF15Q12870 199 aa13.66□□□□□ -0.22
MTHFD1-207ENST00000554677 CTTNQ14247 550 aaKnown RBP13.66□□□□□ -0.22
MTHFD1-207ENST00000554677 FERMT3Q86UX7 667 aa13.66□□□□□ -0.22
MTHFD1-207ENST00000554677 FBXL6Q8N531 539 aa13.66□□□□□ -0.22
MTHFD1-207ENST00000554677 SMG8Q8ND04 991 aaKnown RBP13.66□□□□□ -0.22
MTHFD1-207ENST00000554677 PSPC1Q8WXF1 523 aaKnown RBP13.66□□□□□ -0.22
MTHFD1-207ENST00000554677 SLC7A3Q8WY07 619 aa13.66□□□□□ -0.22
MTHFD1-207ENST00000554677 XPNPEP1Q9NQW7 623 aa13.66□□□□□ -0.22
MTHFD1-207ENST00000554677 BMP2KQ9NSY1 1161 aaPredicted RBP13.66□□□□□ -0.22
MTHFD1-207ENST00000554677 ORC3Q9UBD5 711 aaPredicted RBP13.66□□□□□ -0.22
MTHFD1-207ENST00000554677 PLXNA3P51805 1871 aa13.65□□□□□ -0.22
MTHFD1-207ENST00000554677 TRIP11Q15643 1979 aa13.65□□□□□ -0.22
MTHFD1-207ENST00000554677 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.65□□□□□ -0.22
MTHFD1-207ENST00000554677 WNT7AO00755 349 aa13.65□□□□□ -0.22
MTHFD1-207ENST00000554677 ASAP2O43150 1006 aa13.65□□□□□ -0.22
MTHFD1-207ENST00000554677 LARGE1O95461 756 aa13.65□□□□□ -0.22
MTHFD1-207ENST00000554677 PDGFBP01127 241 aaPredicted RBP13.65□□□□□ -0.22
MTHFD1-207ENST00000554677 VCPP55072 806 aaKnown RBP13.65□□□□□ -0.22
MTHFD1-207ENST00000554677 EMC2Q15006 297 aa13.65□□□□□ -0.22
MTHFD1-207ENST00000554677 RARS2Q5T160 578 aaKnown RBP13.65□□□□□ -0.22
MTHFD1-207ENST00000554677 NCAPH2Q6IBW4 605 aa13.65□□□□□ -0.22
MTHFD1-207ENST00000554677 CES5AQ6NT32 575 aa13.65□□□□□ -0.22
MTHFD1-207ENST00000554677 EXOC8Q8IYI6 725 aa13.65□□□□□ -0.22
MTHFD1-207ENST00000554677 NECAB1Q8N987 351 aa13.65□□□□□ -0.22
MTHFD1-207ENST00000554677 PGBD4Q96DM1 585 aa13.65□□□□□ -0.22
MTHFD1-207ENST00000554677 HSD17B14Q9BPX1 270 aa13.65□□□□□ -0.22
MTHFD1-207ENST00000554677 GBP3Q9H0R5 595 aa13.65□□□□□ -0.22
MTHFD1-207ENST00000554677 ZSWIM4Q9H7M6 989 aa13.65□□□□□ -0.22
MTHFD1-207ENST00000554677 MIOSQ9NXC5 875 aa13.65□□□□□ -0.22
MTHFD1-207ENST00000554677 VPS13AQ96RL7 3174 aa13.65□□□□□ -0.23
MTHFD1-207ENST00000554677 CFAP54Q96N23 3096 aa13.64□□□□□ -0.23
MTHFD1-207ENST00000554677 RIF1Q5UIP0 2472 aaKnown RBP13.64□□□□□ -0.23
MTHFD1-207ENST00000554677 CARNS1A5YM72 827 aa13.64□□□□□ -0.23
MTHFD1-207ENST00000554677 EFEMP2O95967 443 aa13.64□□□□□ -0.23
MTHFD1-207ENST00000554677 XBP1P17861 261 aa13.64□□□□□ -0.23
MTHFD1-207ENST00000554677 NCLP19338 710 aaKnown RBP13.64□□□□□ -0.23
MTHFD1-207ENST00000554677 MTHFRP42898 656 aa13.64□□□□□ -0.23
MTHFD1-207ENST00000554677 PTENP60484 403 aa13.64□□□□□ -0.23
MTHFD1-207ENST00000554677 CYP4A11Q02928 519 aa13.64□□□□□ -0.23
MTHFD1-207ENST00000554677 RNASELQ05823 741 aaKnown RBP13.64□□□□□ -0.23
MTHFD1-207ENST00000554677 GIT2Q14161 759 aa13.64□□□□□ -0.23
MTHFD1-207ENST00000554677 PTPN14Q15678 1187 aa13.64□□□□□ -0.23
MTHFD1-207ENST00000554677 ME3Q16798 604 aa13.64□□□□□ -0.23
MTHFD1-207ENST00000554677 XKR9Q5GH70 373 aa13.64□□□□□ -0.23
MTHFD1-207ENST00000554677 KIAA1841Q6NSI8 718 aa13.64□□□□□ -0.23
MTHFD1-207ENST00000554677 OTUD6AQ7L8S5 288 aa13.64□□□□□ -0.23
MTHFD1-207ENST00000554677 RNF149Q8NC42 400 aa13.64□□□□□ -0.23
MTHFD1-207ENST00000554677 KREMEN2Q8NCW0 462 aa13.64□□□□□ -0.23
MTHFD1-207ENST00000554677 RIPOR3Q96MK2 946 aa13.64□□□□□ -0.23
MTHFD1-207ENST00000554677 NECTIN4Q96NY8 510 aa13.64□□□□□ -0.23
MTHFD1-207ENST00000554677 KLHL5Q96PQ7 755 aa13.64□□□□□ -0.23
MTHFD1-207ENST00000554677 NAP1L4Q99733 375 aaKnown RBP13.64□□□□□ -0.23
MTHFD1-207ENST00000554677 EIF2AK1Q9BQI3 630 aaKnown RBP13.64□□□□□ -0.23
MTHFD1-207ENST00000554677 EIF2AQ9BY44 585 aaKnown RBP13.64□□□□□ -0.23
MTHFD1-207ENST00000554677 RNF39Q9H2S5 420 aa13.64□□□□□ -0.23
MTHFD1-207ENST00000554677 RSAD1Q9HA92 442 aa13.64□□□□□ -0.23
MTHFD1-207ENST00000554677 NR2E1Q9Y466 385 aa13.64□□□□□ -0.23
MTHFD1-207ENST00000554677 NRP1O14786 923 aa13.63□□□□□ -0.23
MTHFD1-207ENST00000554677 INPPL1O15357 1258 aa13.63□□□□□ -0.23
MTHFD1-207ENST00000554677 GAS2O43903 313 aaKnown RBP13.63□□□□□ -0.23
MTHFD1-207ENST00000554677 LYPLA2O95372 231 aa13.63□□□□□ -0.23
MTHFD1-207ENST00000554677 BRD1O95696 1058 aa13.63□□□□□ -0.23
MTHFD1-207ENST00000554677 ALDH2P05091 517 aa13.63□□□□□ -0.23
MTHFD1-207ENST00000554677 AVPR2P30518 371 aa13.63□□□□□ -0.23
MTHFD1-207ENST00000554677 CA8P35219 290 aa13.63□□□□□ -0.23
MTHFD1-207ENST00000554677 ANAPC15P60006 121 aa13.63□□□□□ -0.23
MTHFD1-207ENST00000554677 BMS1Q14692 1282 aaKnown RBP13.63□□□□□ -0.23
MTHFD1-207ENST00000554677 AMHR2Q16671 573 aa13.63□□□□□ -0.23
MTHFD1-207ENST00000554677 TAS1R1Q7RTX1 841 aa13.63□□□□□ -0.23
MTHFD1-207ENST00000554677 TPH2Q8IWU9 490 aa13.63□□□□□ -0.23
MTHFD1-207ENST00000554677 SUGP1Q8IWZ8 645 aaKnown RBP13.63□□□□□ -0.23
MTHFD1-207ENST00000554677 COLGALT2Q8IYK4 626 aa13.63□□□□□ -0.23
MTHFD1-207ENST00000554677 SLFN12Q8IYM2 578 aa13.63□□□□□ -0.23
MTHFD1-207ENST00000554677 TCP11Q8WWU5 503 aa13.63□□□□□ -0.23
MTHFD1-207ENST00000554677 MTRQ99707 1265 aa13.63□□□□□ -0.23
MTHFD1-207ENST00000554677 TMEM175Q9BSA9 504 aa13.63□□□□□ -0.23
MTHFD1-207ENST00000554677 SMOC2Q9H3U7 446 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms