RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 SIL1Q9H173 461 aa5.13□□□□□ -1.59
VTI1B-203ENST00000554636 NKX2-4Q9H2Z4 354 aa5.13□□□□□ -1.59
VTI1B-203ENST00000554636 ZCCHC4Q9H5U6 513 aa5.13□□□□□ -1.59
VTI1B-203ENST00000554636 SIT1Q9Y3P8 196 aa5.13□□□□□ -1.59
VTI1B-203ENST00000554636 PPP2R3BQ9Y5P8 575 aa5.13□□□□□ -1.59
VTI1B-203ENST00000554636 AKAP11Q9UKA4 1901 aa5.13□□□□□ -1.59
VTI1B-203ENST00000554636 TRBV23OR9-2A0A075B6M9 112 aa5.12□□□□□ -1.59
VTI1B-203ENST00000554636 PNMA6EA0A0J9YXQ4 647 aa5.12□□□□□ -1.59
VTI1B-203ENST00000554636 CLRN2A0PK11 232 aa5.12□□□□□ -1.59
VTI1B-203ENST00000554636 NTRK1P04629 796 aa5.12□□□□□ -1.59
VTI1B-203ENST00000554636 GNAI2P04899 355 aa5.12□□□□□ -1.59
VTI1B-203ENST00000554636 IL15P40933 162 aaPredicted RBP5.12□□□□□ -1.59
VTI1B-203ENST00000554636 PHKA1P46020 1223 aa5.12□□□□□ -1.59
VTI1B-203ENST00000554636 KIF23Q02241 960 aaPredicted RBP5.12□□□□□ -1.59
VTI1B-203ENST00000554636 SF1Q15637 639 aaKnown RBP5.12□□□□□ -1.59
VTI1B-203ENST00000554636 ATP2B3Q16720 1220 aa5.12□□□□□ -1.59
VTI1B-203ENST00000554636 INF2Q27J81 1249 aa5.12□□□□□ -1.59
VTI1B-203ENST00000554636 PRSS53Q2L4Q9 553 aa5.12□□□□□ -1.59
VTI1B-203ENST00000554636 CAVIN4Q5BKX8 364 aa5.12□□□□□ -1.59
VTI1B-203ENST00000554636 WWC2Q6AWC2 1192 aa5.12□□□□□ -1.59
VTI1B-203ENST00000554636 TMEM151BQ8IW70 566 aa5.12□□□□□ -1.59
VTI1B-203ENST00000554636 TEX2Q8IWB9 1127 aa5.12□□□□□ -1.59
VTI1B-203ENST00000554636 CELF2-AS1Q8N7Q2 184 aa5.12□□□□□ -1.59
VTI1B-203ENST00000554636 TBC1D22AQ8WUA7 517 aa5.12□□□□□ -1.59
VTI1B-203ENST00000554636 FRAT1Q92837 279 aaPredicted RBP5.12□□□□□ -1.59
VTI1B-203ENST00000554636 COPS5Q92905 334 aa5.12□□□□□ -1.59
VTI1B-203ENST00000554636 DACT3Q96B18 629 aaPredicted RBP5.12□□□□□ -1.59
VTI1B-203ENST00000554636 DEFB129Q9H1M3 183 aa5.12□□□□□ -1.59
VTI1B-203ENST00000554636 VEZTQ9HBM0 779 aa5.12□□□□□ -1.59
VTI1B-203ENST00000554636 HDAC5Q9UQL6 1122 aa5.12□□□□□ -1.59
VTI1B-203ENST00000554636 FAN1Q9Y2M0 1017 aa5.12□□□□□ -1.59
VTI1B-203ENST00000554636 CASP8AP2Q9UKL3 1982 aa5.12□□□□□ -1.59
VTI1B-203ENST00000554636 UBE2Q2LH0YL09 131 aa5.11□□□□□ -1.59
VTI1B-203ENST00000554636 CA12O43570 354 aa5.11□□□□□ -1.59
VTI1B-203ENST00000554636 TRIM13O60858 407 aa5.11□□□□□ -1.59
VTI1B-203ENST00000554636 FPR2P25090 351 aa5.11□□□□□ -1.59
VTI1B-203ENST00000554636 PMLP29590 882 aa5.11□□□□□ -1.59
VTI1B-203ENST00000554636 NF2P35240 595 aa5.11□□□□□ -1.59
VTI1B-203ENST00000554636 CYP4F3Q08477 520 aa5.11□□□□□ -1.59
VTI1B-203ENST00000554636 TFCP2Q12800 502 aa5.11□□□□□ -1.59
VTI1B-203ENST00000554636 RASGRF1Q13972 1273 aa5.11□□□□□ -1.59
VTI1B-203ENST00000554636 APOBEC3HQ6NTF7 200 aaKnown RBP5.11□□□□□ -1.59
VTI1B-203ENST00000554636 ANKS3Q6ZW76 656 aa5.11□□□□□ -1.59
VTI1B-203ENST00000554636 FRS2Q8WU20 508 aa5.11□□□□□ -1.59
VTI1B-203ENST00000554636 TEPSINQ96N21 525 aa5.11□□□□□ -1.59
VTI1B-203ENST00000554636 MTA3Q9BTC8 594 aa5.11□□□□□ -1.59
VTI1B-203ENST00000554636 TDRD3Q9H7E2 651 aaKnown RBP5.11□□□□□ -1.59
VTI1B-203ENST00000554636 CYP26B1Q9NR63 512 aa5.11□□□□□ -1.59
VTI1B-203ENST00000554636 ZNF70Q9UC06 446 aaPredicted RBP5.11□□□□□ -1.59
VTI1B-203ENST00000554636 TMEFF2Q9UIK5 374 aaPredicted RBP5.11□□□□□ -1.59
VTI1B-203ENST00000554636 NUDT5Q9UKK9 219 aa5.11□□□□□ -1.59
VTI1B-203ENST00000554636 FZD1Q9UP38 647 aa5.11□□□□□ -1.59
VTI1B-203ENST00000554636 SALL1Q9NSC2 1324 aa5.11□□□□□ -1.59
VTI1B-203ENST00000554636 RFX7Q2KHR2 1363 aa5.11□□□□□ -1.59
VTI1B-203ENST00000554636 RPAP1Q9BWH6 1393 aaPredicted RBP5.11□□□□□ -1.59
VTI1B-203ENST00000554636 MYH2Q9UKX2 1941 aa5.11□□□□□ -1.59
VTI1B-203ENST00000554636 A0A1B0GUL7 405 aa5.1□□□□□ -1.59
VTI1B-203ENST00000554636 GAKO14976 1311 aa5.1□□□□□ -1.59
VTI1B-203ENST00000554636 MYO1BO43795 1136 aa5.1□□□□□ -1.59
VTI1B-203ENST00000554636 MAST3O60307 1309 aa5.1□□□□□ -1.59
VTI1B-203ENST00000554636 FRAT2O75474 233 aaPredicted RBP5.1□□□□□ -1.59
VTI1B-203ENST00000554636 ASGR2P07307 311 aa5.1□□□□□ -1.59
VTI1B-203ENST00000554636 ATF2P15336 505 aa5.1□□□□□ -1.59
VTI1B-203ENST00000554636 PRDX5P30044 214 aa5.1□□□□□ -1.59
VTI1B-203ENST00000554636 RBM5P52756 815 aaKnown RBP eCLIP5.1□□□□□ -1.59
VTI1B-203ENST00000554636 CACNB3P54284 484 aa5.1□□□□□ -1.59
VTI1B-203ENST00000554636 PRKG1Q13976 671 aa5.1□□□□□ -1.59
VTI1B-203ENST00000554636 RASA3Q14644 834 aa5.1□□□□□ -1.59
VTI1B-203ENST00000554636 PDS5AQ29RF7 1337 aaKnown RBP5.1□□□□□ -1.59
VTI1B-203ENST00000554636 MAST2Q6P0Q8 1798 aa5.1□□□□□ -1.59
VTI1B-203ENST00000554636 CEP85Q6P2H3 762 aa5.1□□□□□ -1.59
VTI1B-203ENST00000554636 EEPD1Q7L9B9 569 aa5.1□□□□□ -1.59
VTI1B-203ENST00000554636 ARMC9Q7Z3E5 817 aa5.1□□□□□ -1.59
VTI1B-203ENST00000554636 CCDC103Q8IW40 242 aa5.1□□□□□ -1.59
VTI1B-203ENST00000554636 ITPRIPQ8IWB1 547 aa5.1□□□□□ -1.59
VTI1B-203ENST00000554636 FTSJ3Q8IY81 847 aaKnown RBP5.1□□□□□ -1.59
VTI1B-203ENST00000554636 ADGRG2Q8IZP9 1017 aa5.1□□□□□ -1.59
VTI1B-203ENST00000554636 SYT8Q8NBV8 401 aa5.1□□□□□ -1.59
VTI1B-203ENST00000554636 NPLOC4Q8TAT6 608 aa5.1□□□□□ -1.59
VTI1B-203ENST00000554636 WDR66Q8TBY9 1149 aa5.1□□□□□ -1.59
VTI1B-203ENST00000554636 SSH3Q8TE77 659 aa5.1□□□□□ -1.59
VTI1B-203ENST00000554636 DPF3Q92784 378 aa5.1□□□□□ -1.59
VTI1B-203ENST00000554636 TEKT1Q969V4 418 aa5.1□□□□□ -1.59
VTI1B-203ENST00000554636 MRIQ9BWK5 157 aa5.1□□□□□ -1.59
VTI1B-203ENST00000554636 PARD6AQ9NPB6 346 aa5.1□□□□□ -1.59
VTI1B-203ENST00000554636 GNL3LQ9NVN8 582 aaKnown RBP5.1□□□□□ -1.59
VTI1B-203ENST00000554636 RNF186Q9NXI6 227 aa5.1□□□□□ -1.59
VTI1B-203ENST00000554636 SAGE1Q9NXZ1 904 aa5.1□□□□□ -1.59
VTI1B-203ENST00000554636 DENND2AQ9ULE3 1009 aa5.1□□□□□ -1.59
VTI1B-203ENST00000554636 DOCK2Q92608 1830 aa5.09□□□□□ -1.59
VTI1B-203ENST00000554636 ATRNL1Q5VV63 1379 aa5.09□□□□□ -1.59
VTI1B-203ENST00000554636 A0A1B0GTL3 188 aa5.09□□□□□ -1.59
VTI1B-203ENST00000554636 TCP10L2B9ZVM9 353 aa5.09□□□□□ -1.59
VTI1B-203ENST00000554636 C22orf46C9J442 243 aa5.09□□□□□ -1.59
VTI1B-203ENST00000554636 MEFVO15553 781 aaPredicted RBP5.09□□□□□ -1.59
VTI1B-203ENST00000554636 PLA2G1BP04054 148 aaKnown RBP5.09□□□□□ -1.59
VTI1B-203ENST00000554636 NCAM1P13591 858 aa5.09□□□□□ -1.59
VTI1B-203ENST00000554636 HOXA5P20719 270 aa5.09□□□□□ -1.59
VTI1B-203ENST00000554636 IGFBP6P24592 240 aaPredicted RBP5.09□□□□□ -1.59
VTI1B-203ENST00000554636 GRIA2P42262 883 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms