RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 SFMBT2Q5VUG0 894 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 PHLDB3Q6NSJ2 640 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 TRMT10CQ7L0Y3 403 aaKnown RBP3.75□□□□□ -1.81
SEC23A-207ENST00000554615 SCML4Q8N228 414 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 METTL13Q8N6R0 699 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 GPRASP2Q96D09 838 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 NOX5Q96PH1 765 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 ZSWIM1Q9BR11 485 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 RUSC1Q9BVN2 902 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 BCO2Q9BYV7 579 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 ARHGEF3Q9NR81 526 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 EMILIN3Q9NT22 766 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 TRMT1Q9NXH9 659 aaKnown RBP3.75□□□□□ -1.81
SEC23A-207ENST00000554615 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.75□□□□□ -1.81
SEC23A-207ENST00000554615 APEX2Q9UBZ4 518 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 CNOT8Q9UFF9 292 aaKnown RBP3.75□□□□□ -1.81
SEC23A-207ENST00000554615 FAM153AQ9UHL3 310 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 RRP15Q9Y3B9 282 aaKnown RBP3.75□□□□□ -1.81
SEC23A-207ENST00000554615 MIA3Q5JRA6 1907 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 BPTFQ12830 3046 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 TRIM64A6NGJ6 449 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 DDTLA6NHG4 134 aaPredicted RBP3.75□□□□□ -1.81
SEC23A-207ENST00000554615 ZBTB42B2RXF5 422 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 N4BP3O15049 544 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 RAD51CO43502 376 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 PSTPIP1O43586 416 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 TACC1O75410 805 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 RGS20O76081 388 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 KCNA2P16389 499 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 MCM7P33993 719 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 PSMD6Q15008 389 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 OASLQ15646 514 aaKnown RBP3.75□□□□□ -1.81
SEC23A-207ENST00000554615 EZH2Q15910 746 aaKnown RBP3.75□□□□□ -1.81
SEC23A-207ENST00000554615 CFAP221Q4G0U5 840 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 ZNF746Q6NUN9 644 aaPredicted RBP3.75□□□□□ -1.81
SEC23A-207ENST00000554615 TTC27Q6P3X3 843 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 VSTM1Q6UX27 236 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 NFXL1Q6ZNB6 911 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 POLNQ7Z5Q5 900 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 CCDC65Q8IXS2 484 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 PRELID2Q8N945 189 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 RAB3IL1Q8TBN0 382 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 EPS8L1Q8TE68 723 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 NCSTNQ92542 709 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 LPAR1Q92633 364 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 NKD2Q969F2 451 aaPredicted RBP3.75□□□□□ -1.81
SEC23A-207ENST00000554615 CALML4Q96GE6 196 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 KREMEN1Q96MU8 473 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 EIF2AK1Q9BQI3 630 aaKnown RBP3.75□□□□□ -1.81
SEC23A-207ENST00000554615 SLF1Q9BQI6 1058 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 NOC4LQ9BVI4 516 aaKnown RBP3.75□□□□□ -1.81
SEC23A-207ENST00000554615 LRRC4CQ9HCJ2 640 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 HDAC9Q9UKV0 1011 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 TRPC5Q9UL62 973 aaPredicted RBP3.75□□□□□ -1.81
SEC23A-207ENST00000554615 SYNGAP1Q96PV0 1343 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 DNAJC25-GNG10A0A024R161 153 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 FOXO6A8MYZ6 492 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 E9PQ18 207 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 ZNF185O15231 689 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 OPA1O60313 960 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 EVI5O60447 810 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 AGTP01019 485 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 TFRCP02786 760 aaKnown RBP3.74□□□□□ -1.81
SEC23A-207ENST00000554615 NR3C1P04150 777 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 TSPY3P0CV98 308 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 TSPY8P0CW00 308 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 RARGP13631 454 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 CHRNA3P32297 505 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 SLC1A1P43005 524 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 MRPS9P82933 396 aaKnown RBP3.74□□□□□ -1.81
SEC23A-207ENST00000554615 CEBPZQ03701 1054 aaKnown RBP3.74□□□□□ -1.81
SEC23A-207ENST00000554615 PAK2Q13177 524 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 C11orf91Q3C1V1 193 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 SLC9C1Q4G0N8 1177 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 ILDR2Q71H61 639 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 IFT20Q8IY31 132 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 CNBD1Q8NA66 436 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 TMEM161BQ8NDZ6 487 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 MYCBPAPQ8TBZ2 947 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 AZIN2Q96A70 460 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 HOOK2Q96ED9 719 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 OTUD5Q96G74 571 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 SERPINB12Q96P63 405 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 PCDHB18PQ96TA0 734 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 JPH2Q9BR39 696 aaPredicted RBP3.74□□□□□ -1.81
SEC23A-207ENST00000554615 IFIH1Q9BYX4 1025 aaKnown RBP3.74□□□□□ -1.81
SEC23A-207ENST00000554615 WDR11Q9BZH6 1224 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 MLXIPQ9HAP2 919 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 MCM9Q9NXL9 1143 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 CCNL1Q9UK58 526 aaPredicted RBP3.74□□□□□ -1.81
SEC23A-207ENST00000554615 GTF3C4Q9UKN8 822 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 VWA8A3KMH1 1905 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 FAM177BA6PVY3 158 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 GPR25O00155 361 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 TYROBPO43914 113 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 CACNG3O60359 315 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 CCNT1O60563 726 aaKnown RBP3.74□□□□□ -1.81
SEC23A-207ENST00000554615 TOMM70O94826 608 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 PLS3P13797 630 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 YBX3P16989 372 aaKnown RBP eCLIP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms