RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 RRAGAQ7L523 313 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 TXNDC2Q86VQ3 553 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 FAM186BQ8IYM0 893 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 METTL13Q8N6R0 699 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.23□□□□□ -0.77
SIX4-202ENST00000554079 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.23□□□□□ -0.77
SIX4-202ENST00000554079 RIN3Q8TB24 985 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 ANKS1AQ92625 1134 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 CASP10Q92851 521 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 NOC4LQ9BVI4 516 aaKnown RBP10.23□□□□□ -0.77
SIX4-202ENST00000554079 STK33Q9BYT3 514 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 NT5C3AQ9H0P0 336 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 NRDE2Q9H7Z3 1164 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 MLXIPLQ9NP71 852 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 EMILIN3Q9NT22 766 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 ITM2BQ9Y287 266 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 TTLL3Q9Y4R7 772 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 N6AMT1Q9Y5N5 214 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 ADAMTS13Q76LX8 1427 aa10.22□□□□□ -0.77
SIX4-202ENST00000554079 BTNL10A8MVZ5 291 aa10.22□□□□□ -0.77
SIX4-202ENST00000554079 MATN2O00339 956 aa10.22□□□□□ -0.77
SIX4-202ENST00000554079 FBP2O00757 339 aa10.22□□□□□ -0.77
SIX4-202ENST00000554079 KLRC4O43908 158 aa10.22□□□□□ -0.77
SIX4-202ENST00000554079 TBC1D12O60347 775 aa10.22□□□□□ -0.77
SIX4-202ENST00000554079 CBFA2T3O75081 653 aa10.22□□□□□ -0.77
SIX4-202ENST00000554079 OXSR1O95747 527 aaPredicted RBP10.22□□□□□ -0.77
SIX4-202ENST00000554079 IFNAR1P17181 557 aa10.22□□□□□ -0.77
SIX4-202ENST00000554079 ADRA2BP18089 450 aa10.22□□□□□ -0.77
SIX4-202ENST00000554079 FOXN2P32314 431 aa10.22□□□□□ -0.77
SIX4-202ENST00000554079 MTIF2P46199 727 aaKnown RBP10.22□□□□□ -0.77
SIX4-202ENST00000554079 CDR2Q01850 454 aa10.22□□□□□ -0.77
SIX4-202ENST00000554079 PPP2R5CQ13362 524 aa10.22□□□□□ -0.77
SIX4-202ENST00000554079 KRT72Q14CN4 511 aa10.22□□□□□ -0.77
SIX4-202ENST00000554079 POTEEQ6S8J3 1075 aa10.22□□□□□ -0.77
SIX4-202ENST00000554079 RBM44Q6ZP01 1051 aaKnown RBP10.22□□□□□ -0.77
SIX4-202ENST00000554079 BARGINQ6ZT62 677 aa10.22□□□□□ -0.77
SIX4-202ENST00000554079 RIC3Q7Z5B4 369 aa10.22□□□□□ -0.77
SIX4-202ENST00000554079 CSGALNACT2Q8N6G5 542 aa10.22□□□□□ -0.77
SIX4-202ENST00000554079 ANKRD42Q8N9B4 389 aa10.22□□□□□ -0.77
SIX4-202ENST00000554079 PLEKHO2Q8TD55 490 aa10.22□□□□□ -0.77
SIX4-202ENST00000554079 BHMTQ93088 406 aa10.22□□□□□ -0.77
SIX4-202ENST00000554079 NEUROD6Q96NK8 337 aa10.22□□□□□ -0.77
SIX4-202ENST00000554079 LBHD1Q9BQE6 289 aaPredicted RBP10.22□□□□□ -0.77
SIX4-202ENST00000554079 TRIM31Q9BZY9 425 aa10.22□□□□□ -0.77
SIX4-202ENST00000554079 SEMA4AQ9H3S1 761 aa10.22□□□□□ -0.77
SIX4-202ENST00000554079 TPK1Q9H3S4 243 aa10.22□□□□□ -0.77
SIX4-202ENST00000554079 CABP5Q9NP86 173 aa10.22□□□□□ -0.77
SIX4-202ENST00000554079 USP40Q9NVE5 1235 aa10.22□□□□□ -0.77
SIX4-202ENST00000554079 DDX18Q9NVP1 670 aaKnown RBP10.22□□□□□ -0.77
SIX4-202ENST00000554079 EURLQ9NYK6 297 aa10.22□□□□□ -0.77
SIX4-202ENST00000554079 ZNHIT2Q9UHR6 403 aa10.22□□□□□ -0.77
SIX4-202ENST00000554079 ANGPTL2Q9UKU9 493 aa10.22□□□□□ -0.77
SIX4-202ENST00000554079 CCPG1Q9ULG6 757 aa10.22□□□□□ -0.77
SIX4-202ENST00000554079 STARD13Q9Y3M8 1113 aa10.22□□□□□ -0.77
SIX4-202ENST00000554079 LMO7Q8WWI1 1683 aa10.21□□□□□ -0.77
SIX4-202ENST00000554079 SH3PXD2BA1X283 911 aa10.21□□□□□ -0.77
SIX4-202ENST00000554079 PSMA7O14818 248 aa10.21□□□□□ -0.77
SIX4-202ENST00000554079 EXOC3O60645 756 aa10.21□□□□□ -0.77
SIX4-202ENST00000554079 HNRNPCL1O60812 293 aaKnown RBP10.21□□□□□ -0.77
SIX4-202ENST00000554079 ZBED1O96006 694 aa10.21□□□□□ -0.77
SIX4-202ENST00000554079 ZFYP08048 801 aaPredicted RBP10.21□□□□□ -0.77
SIX4-202ENST00000554079 S100A1P23297 94 aa10.21□□□□□ -0.77
SIX4-202ENST00000554079 CTC1Q2NKJ3 1217 aa10.21□□□□□ -0.77
SIX4-202ENST00000554079 SYCP2LQ5T4T6 812 aa10.21□□□□□ -0.77
SIX4-202ENST00000554079 C14orf80Q86SX3 495 aa10.21□□□□□ -0.77
SIX4-202ENST00000554079 PEX5LQ8IYB4 626 aa10.21□□□□□ -0.77
SIX4-202ENST00000554079 LRRC57Q8N9N7 239 aa10.21□□□□□ -0.77
SIX4-202ENST00000554079 LSM14AQ8ND56 463 aaKnown RBP10.21□□□□□ -0.77
SIX4-202ENST00000554079 C10orf82Q8WW14 230 aa10.21□□□□□ -0.77
SIX4-202ENST00000554079 SREK1Q8WXA9 508 aaKnown RBP10.21□□□□□ -0.77
SIX4-202ENST00000554079 ARHGEF2Q92974 986 aaKnown RBP10.21□□□□□ -0.77
SIX4-202ENST00000554079 ATP6V0A1Q93050 837 aa10.21□□□□□ -0.77
SIX4-202ENST00000554079 NACC2Q96BF6 587 aa10.21□□□□□ -0.77
SIX4-202ENST00000554079 ITPKCQ96DU7 683 aa10.21□□□□□ -0.77
SIX4-202ENST00000554079 MYL10Q9BUA6 226 aa10.21□□□□□ -0.77
SIX4-202ENST00000554079 EBF3Q9H4W6 596 aa10.21□□□□□ -0.77
SIX4-202ENST00000554079 SAR1AQ9NR31 198 aa10.21□□□□□ -0.77
SIX4-202ENST00000554079 FAM207AQ9NSI2 230 aaPredicted RBP10.21□□□□□ -0.77
SIX4-202ENST00000554079 ZDHHC7Q9NXF8 308 aa10.21□□□□□ -0.77
SIX4-202ENST00000554079 HBS1LQ9Y450 684 aaKnown RBP10.21□□□□□ -0.77
SIX4-202ENST00000554079 TELO2Q9Y4R8 837 aa10.21□□□□□ -0.77
SIX4-202ENST00000554079 METP08581 1390 aa10.21□□□□□ -0.77
SIX4-202ENST00000554079 POTEFA5A3E0 1075 aa10.21□□□□□ -0.78
SIX4-202ENST00000554079 RIPK2O43353 540 aa10.21□□□□□ -0.78
SIX4-202ENST00000554079 AP1G1O43747 822 aa10.21□□□□□ -0.78
SIX4-202ENST00000554079 OPHN1O60890 802 aa10.21□□□□□ -0.78
SIX4-202ENST00000554079 POTEIP0CG38 1075 aa10.21□□□□□ -0.78
SIX4-202ENST00000554079 PTPN12Q05209 780 aaKnown RBP10.21□□□□□ -0.78
SIX4-202ENST00000554079 LPIN1Q14693 890 aa10.21□□□□□ -0.78
SIX4-202ENST00000554079 EARS2Q5JPH6 523 aaKnown RBP10.21□□□□□ -0.78
SIX4-202ENST00000554079 DEPDC1Q5TB30 811 aa10.21□□□□□ -0.78
SIX4-202ENST00000554079 C1orf228Q6PIY5 440 aa10.21□□□□□ -0.78
SIX4-202ENST00000554079 RSPH3Q86UC2 560 aa10.21□□□□□ -0.78
SIX4-202ENST00000554079 SGMS1Q86VZ5 419 aa10.21□□□□□ -0.78
SIX4-202ENST00000554079 PASD1Q8IV76 773 aa10.21□□□□□ -0.78
SIX4-202ENST00000554079 CEP70Q8NHQ1 597 aa10.21□□□□□ -0.78
SIX4-202ENST00000554079 UHMK1Q8TAS1 419 aaKnown RBP10.21□□□□□ -0.78
SIX4-202ENST00000554079 USP33Q8TEY7 942 aa10.21□□□□□ -0.78
SIX4-202ENST00000554079 SHISA4Q96DD7 197 aa10.21□□□□□ -0.78
SIX4-202ENST00000554079 FNBP1Q96RU3 617 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms