RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 ZNF804BA4D1E1 1349 aa4.05□□□□□ -1.76
SLIRP-202ENST00000553981 MAPK8IP3Q9UPT6 1336 aa4.05□□□□□ -1.76
SLIRP-202ENST00000553981 APAF1O14727 1248 aa4.05□□□□□ -1.76
SLIRP-202ENST00000553981 KCNH1O95259 989 aa4.05□□□□□ -1.76
SLIRP-202ENST00000553981 HOXB7P09629 217 aa4.05□□□□□ -1.76
SLIRP-202ENST00000553981 CACNB3P54284 484 aa4.05□□□□□ -1.76
SLIRP-202ENST00000553981 ITGA1P56199 1179 aa4.05□□□□□ -1.76
SLIRP-202ENST00000553981 RBM10P98175 930 aaKnown RBP4.05□□□□□ -1.76
SLIRP-202ENST00000553981 MOGSQ13724 837 aa4.05□□□□□ -1.76
SLIRP-202ENST00000553981 PPP2R5EQ16537 467 aa4.05□□□□□ -1.76
SLIRP-202ENST00000553981 INF2Q27J81 1249 aa4.05□□□□□ -1.76
SLIRP-202ENST00000553981 CCDC152Q4G0S7 254 aa4.05□□□□□ -1.76
SLIRP-202ENST00000553981 KIAA1211LQ6NV74 962 aa4.05□□□□□ -1.76
SLIRP-202ENST00000553981 BORAQ6PGQ7 559 aa4.05□□□□□ -1.76
SLIRP-202ENST00000553981 TEX2Q8IWB9 1127 aa4.05□□□□□ -1.76
SLIRP-202ENST00000553981 TXNDC5Q8NBS9 432 aaKnown RBP4.05□□□□□ -1.76
SLIRP-202ENST00000553981 SLC16A11Q8NCK7 471 aa4.05□□□□□ -1.76
SLIRP-202ENST00000553981 OR6P1Q8NGX9 317 aa4.05□□□□□ -1.76
SLIRP-202ENST00000553981 RASGRP4Q8TDF6 673 aa4.05□□□□□ -1.76
SLIRP-202ENST00000553981 RUNDC1Q96C34 613 aa4.05□□□□□ -1.76
SLIRP-202ENST00000553981 SPATA32Q96LK8 384 aa4.05□□□□□ -1.76
SLIRP-202ENST00000553981 PLA2G12BQ9BX93 195 aa4.05□□□□□ -1.76
SLIRP-202ENST00000553981 PUS3Q9BZE2 481 aaKnown RBP4.05□□□□□ -1.76
SLIRP-202ENST00000553981 COA1Q9GZY4 146 aa4.05□□□□□ -1.76
SLIRP-202ENST00000553981 AP5M1Q9H0R1 490 aa4.05□□□□□ -1.76
SLIRP-202ENST00000553981 TMX4Q9H1E5 349 aaPredicted RBP4.05□□□□□ -1.76
SLIRP-202ENST00000553981 HYPKQ9NX55 129 aa4.05□□□□□ -1.76
SLIRP-202ENST00000553981 CWC25Q9NXE8 425 aaPredicted RBP4.05□□□□□ -1.76
SLIRP-202ENST00000553981 EMC9Q9Y3B6 208 aa4.05□□□□□ -1.76
SLIRP-202ENST00000553981 SZT2Q5T011 3432 aa4.05□□□□□ -1.76
SLIRP-202ENST00000553981 ARAP2Q8WZ64 1704 aa4.04□□□□□ -1.76
SLIRP-202ENST00000553981 ADGRA2Q96PE1 1338 aa4.04□□□□□ -1.76
SLIRP-202ENST00000553981 CENPFP49454 3210 aa4.04□□□□□ -1.76
SLIRP-202ENST00000553981 ANKRD34BA5PLL1 514 aa4.04□□□□□ -1.76
SLIRP-202ENST00000553981 MANSC4A6NHS7 340 aaPredicted RBP4.04□□□□□ -1.76
SLIRP-202ENST00000553981 C22orf46C9J442 243 aa4.04□□□□□ -1.76
SLIRP-202ENST00000553981 BTBD19C9JJ37 291 aa4.04□□□□□ -1.76
SLIRP-202ENST00000553981 DDX3XO00571 662 aaKnown RBP eCLIP4.04□□□□□ -1.768e-31■■□□□ 11.4
SLIRP-202ENST00000553981 FSHBP01225 129 aa4.04□□□□□ -1.76
SLIRP-202ENST00000553981 THBDP07204 575 aa4.04□□□□□ -1.76
SLIRP-202ENST00000553981 IL1R1P14778 569 aa4.04□□□□□ -1.76
SLIRP-202ENST00000553981 DDX10Q13206 875 aaKnown RBP4.04□□□□□ -1.76
SLIRP-202ENST00000553981 RASA3Q14644 834 aa4.04□□□□□ -1.76
SLIRP-202ENST00000553981 KSR2Q6VAB6 950 aa4.04□□□□□ -1.76
SLIRP-202ENST00000553981 ARMC9Q7Z3E5 817 aa4.04□□□□□ -1.76
SLIRP-202ENST00000553981 UBE3BQ7Z3V4 1068 aa4.04□□□□□ -1.76
SLIRP-202ENST00000553981 FAM124AQ86V42 546 aa4.04□□□□□ -1.76
SLIRP-202ENST00000553981 ZC3H18Q86VM9 953 aaKnown RBP4.04□□□□□ -1.76
SLIRP-202ENST00000553981 ZNF654Q8IZM8 581 aa4.04□□□□□ -1.76
SLIRP-202ENST00000553981 CHST13Q8NET6 341 aa4.04□□□□□ -1.76
SLIRP-202ENST00000553981 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.04□□□□□ -1.761e-8■■■■■ 34
SLIRP-202ENST00000553981 SEC14L1Q92503 715 aa4.04□□□□□ -1.76
SLIRP-202ENST00000553981 DVL3Q92997 716 aaPredicted RBP4.04□□□□□ -1.76
SLIRP-202ENST00000553981 OPTNQ96CV9 577 aa4.04□□□□□ -1.76
SLIRP-202ENST00000553981 TMEM39BQ9GZU3 492 aa4.04□□□□□ -1.76
SLIRP-202ENST00000553981 TDRD3Q9H7E2 651 aaKnown RBP4.04□□□□□ -1.76
SLIRP-202ENST00000553981 ZNF70Q9UC06 446 aaPredicted RBP4.04□□□□□ -1.76
SLIRP-202ENST00000553981 SRRDQ9UH36 339 aa4.04□□□□□ -1.76
SLIRP-202ENST00000553981 ST6GALNAC2Q9UJ37 374 aa4.04□□□□□ -1.76
SLIRP-202ENST00000553981 COL1A1P02452 1464 aaPredicted RBP4.04□□□□□ -1.76
SLIRP-202ENST00000553981 DOCK3Q8IZD9 2030 aa4.04□□□□□ -1.76
SLIRP-202ENST00000553981 ZNF536O15090 1300 aa4.03□□□□□ -1.76
SLIRP-202ENST00000553981 TCP10L2B9ZVM9 353 aa4.03□□□□□ -1.76
SLIRP-202ENST00000553981 ZBTB48P10074 688 aaPredicted RBP4.03□□□□□ -1.76
SLIRP-202ENST00000553981 FPR2P25090 351 aa4.03□□□□□ -1.76
SLIRP-202ENST00000553981 STAT5AP42229 794 aa4.03□□□□□ -1.76
SLIRP-202ENST00000553981 GYG1P46976 350 aa4.03□□□□□ -1.76
SLIRP-202ENST00000553981 SLC6A11P48066 632 aa4.03□□□□□ -1.76
SLIRP-202ENST00000553981 SP3Q02447 781 aa4.03□□□□□ -1.76
SLIRP-202ENST00000553981 CYP4F3Q08477 520 aa4.03□□□□□ -1.76
SLIRP-202ENST00000553981 SREBF2Q12772 1141 aa4.03□□□□□ -1.76
SLIRP-202ENST00000553981 ADAM9Q13443 819 aa4.03□□□□□ -1.76
SLIRP-202ENST00000553981 VGLL4Q14135 290 aa4.03□□□□□ -1.76
SLIRP-202ENST00000553981 GCKRQ14397 625 aa4.03□□□□□ -1.76
SLIRP-202ENST00000553981 CR1LQ2VPA4 569 aa4.03□□□□□ -1.76
SLIRP-202ENST00000553981 VHLLQ6RSH7 139 aa4.03□□□□□ -1.76
SLIRP-202ENST00000553981 GLB1LQ6UWU2 654 aa4.03□□□□□ -1.76
SLIRP-202ENST00000553981 C17orf99Q6UX52 265 aa4.03□□□□□ -1.76
SLIRP-202ENST00000553981 C15orf52Q6ZUT6 534 aaKnown RBP4.03□□□□□ -1.76
SLIRP-202ENST00000553981 LIMS2Q7Z4I7 341 aa4.03□□□□□ -1.76
SLIRP-202ENST00000553981 MILR1Q7Z6M3 343 aa4.03□□□□□ -1.76
SLIRP-202ENST00000553981 APOBEC3FQ8IUX4 373 aaKnown RBP4.03□□□□□ -1.76
SLIRP-202ENST00000553981 ZFPM1Q8IX07 1006 aa4.03□□□□□ -1.76
SLIRP-202ENST00000553981 FAM126BQ8IXS8 530 aa4.03□□□□□ -1.76
SLIRP-202ENST00000553981 BVESQ8NE79 360 aa4.03□□□□□ -1.76
SLIRP-202ENST00000553981 TDRD7Q8NHU6 1098 aaKnown RBP4.03□□□□□ -1.76
SLIRP-202ENST00000553981 ZKSCAN4Q969J2 545 aaPredicted RBP4.03□□□□□ -1.76
SLIRP-202ENST00000553981 GPRASP2Q96D09 838 aa4.03□□□□□ -1.76
SLIRP-202ENST00000553981 SHDQ96IW2 340 aa4.03□□□□□ -1.76
SLIRP-202ENST00000553981 LCORQ96JN0 433 aaPredicted RBP4.03□□□□□ -1.76
SLIRP-202ENST00000553981 FAM84BQ96KN1 310 aaPredicted RBP4.03□□□□□ -1.76
SLIRP-202ENST00000553981 VEZTQ9HBM0 779 aa4.03□□□□□ -1.76
SLIRP-202ENST00000553981 IFT57Q9NWB7 429 aa4.03□□□□□ -1.76
SLIRP-202ENST00000553981 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.03□□□□□ -1.76
SLIRP-202ENST00000553981 GABRQQ9UN88 632 aa4.03□□□□□ -1.76
SLIRP-202ENST00000553981 PHIPQ8WWQ0 1821 aa4.02□□□□□ -1.77
SLIRP-202ENST00000553981 MYBBP1AQ9BQG0 1328 aaKnown RBP4.02□□□□□ -1.77
SLIRP-202ENST00000553981 CCL15-CCL14A0A0B4J2E2 113 aa4.02□□□□□ -1.77
SLIRP-202ENST00000553981 C9orf118A6NHY6 69 aa4.02□□□□□ -1.77
SLIRP-202ENST00000553981 SUV39H1O43463 412 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms