RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 CCDC155Q8N6L0 562 aa10.71□□□□□ -0.69
CHD8-204ENST00000553622 DHX38Q92620 1227 aaKnown RBP10.71□□□□□ -0.69
CHD8-204ENST00000553622 EEF2KMTQ96G04 330 aa10.71□□□□□ -0.69
CHD8-204ENST00000553622 CTAGE1Q96RT6 745 aa10.71□□□□□ -0.69
CHD8-204ENST00000553622 BPIFA3Q9BQP9 254 aa10.71□□□□□ -0.69
CHD8-204ENST00000553622 TARS2Q9BW92 718 aaKnown RBP10.71□□□□□ -0.69
CHD8-204ENST00000553622 MRPL4Q9BYD3 311 aaKnown RBP10.71□□□□□ -0.69
CHD8-204ENST00000553622 GBP3Q9H0R5 595 aa10.71□□□□□ -0.69
CHD8-204ENST00000553622 ADAMTS10Q9H324 1103 aa10.71□□□□□ -0.69
CHD8-204ENST00000553622 KCTD10Q9H3F6 313 aa10.71□□□□□ -0.69
CHD8-204ENST00000553622 TMEM134Q9H6X4 195 aa10.71□□□□□ -0.69
CHD8-204ENST00000553622 MINDY3Q9H8M7 445 aa10.71□□□□□ -0.69
CHD8-204ENST00000553622 IFT122Q9HBG6 1241 aa10.71□□□□□ -0.69
CHD8-204ENST00000553622 PRMT7Q9NVM4 692 aaPredicted RBP10.71□□□□□ -0.69
CHD8-204ENST00000553622 ANKFY1Q9P2R3 1169 aa10.71□□□□□ -0.69
CHD8-204ENST00000553622 ZMYM2Q9UBW7 1377 aa10.71□□□□□ -0.69
CHD8-204ENST00000553622 NFE2L3Q9Y4A8 694 aa10.71□□□□□ -0.69
CHD8-204ENST00000553622 DNAH12Q6ZR08 3092 aa10.71□□□□□ -0.7
CHD8-204ENST00000553622 GOLGA6L3A6NEY3 463 aa10.7□□□□□ -0.7
CHD8-204ENST00000553622 TISP43B9A030 160 aa10.7□□□□□ -0.7
CHD8-204ENST00000553622 B4GALT5O43286 388 aa10.7□□□□□ -0.7
CHD8-204ENST00000553622 CHRNA1P02708 482 aa10.7□□□□□ -0.7
CHD8-204ENST00000553622 NR3C1P04150 777 aa10.7□□□□□ -0.7
CHD8-204ENST00000553622 COL6A1P12109 1028 aa10.7□□□□□ -0.7
CHD8-204ENST00000553622 DARSP14868 501 aaKnown RBP10.7□□□□□ -0.7
CHD8-204ENST00000553622 SCP2P22307 547 aa10.7□□□□□ -0.7
CHD8-204ENST00000553622 SFPQP23246 707 aaKnown RBP eCLIP10.7□□□□□ -0.7
CHD8-204ENST00000553622 EIF4BP23588 611 aaKnown RBP10.7□□□□□ -0.7
CHD8-204ENST00000553622 CDK7P50613 346 aa10.7□□□□□ -0.7
CHD8-204ENST00000553622 CRYBB1P53674 252 aaPredicted RBP10.7□□□□□ -0.7
CHD8-204ENST00000553622 PLCB2Q00722 1185 aa10.7□□□□□ -0.7
CHD8-204ENST00000553622 TLE2Q04725 743 aa10.7□□□□□ -0.7
CHD8-204ENST00000553622 LRRC63Q05C16 580 aa10.7□□□□□ -0.7
CHD8-204ENST00000553622 NCBP1Q09161 790 aaKnown RBP10.7□□□□□ -0.7
CHD8-204ENST00000553622 BFSP2Q13515 415 aa10.7□□□□□ -0.7
CHD8-204ENST00000553622 SNX17Q15036 470 aa10.7□□□□□ -0.7
CHD8-204ENST00000553622 ZNF618Q5T7W0 954 aa10.7□□□□□ -0.7
CHD8-204ENST00000553622 SPATA1Q5VX52 437 aa10.7□□□□□ -0.7
CHD8-204ENST00000553622 CEP135Q66GS9 1140 aa10.7□□□□□ -0.7
CHD8-204ENST00000553622 CENPPQ6IPU0 288 aa10.7□□□□□ -0.7
CHD8-204ENST00000553622 TTI2Q6NXR4 508 aa10.7□□□□□ -0.7
CHD8-204ENST00000553622 ARMCX5Q6P1M9 558 aa10.7□□□□□ -0.7
CHD8-204ENST00000553622 ZBTB33Q86T24 672 aa10.7□□□□□ -0.7
CHD8-204ENST00000553622 MAP4K3Q8IVH8 894 aa10.7□□□□□ -0.7
CHD8-204ENST00000553622 ZNF710Q8N1W2 664 aa10.7□□□□□ -0.7
CHD8-204ENST00000553622 GOLGA5Q8TBA6 731 aa10.7□□□□□ -0.7
CHD8-204ENST00000553622 ENOX1Q8TC92 643 aaKnown RBP10.7□□□□□ -0.7
CHD8-204ENST00000553622 POMGNT1Q8WZA1 660 aa10.7□□□□□ -0.7
CHD8-204ENST00000553622 CPB2Q96IY4 423 aa10.7□□□□□ -0.7
CHD8-204ENST00000553622 TCHPQ9BT92 498 aa10.7□□□□□ -0.7
CHD8-204ENST00000553622 STRA6Q9BX79 667 aa10.7□□□□□ -0.7
CHD8-204ENST00000553622 SRRTQ9BXP5 876 aaKnown RBP10.7□□□□□ -0.7
CHD8-204ENST00000553622 CCDC113Q9H0I3 377 aa10.7□□□□□ -0.7
CHD8-204ENST00000553622 PCIF1Q9H4Z3 704 aa10.7□□□□□ -0.7
CHD8-204ENST00000553622 MAGEC2Q9UBF1 373 aaPredicted RBP10.7□□□□□ -0.7
CHD8-204ENST00000553622 TET1Q8NFU7 2136 aa10.7□□□□□ -0.7
CHD8-204ENST00000553622 ANKRD63C9JTQ0 380 aa10.69□□□□□ -0.7
CHD8-204ENST00000553622 RBAK-RBAKDNI3L0D1 243 aa10.69□□□□□ -0.7
CHD8-204ENST00000553622 ACKR2O00590 384 aa10.69□□□□□ -0.7
CHD8-204ENST00000553622 PDXKO00764 312 aa10.69□□□□□ -0.7
CHD8-204ENST00000553622 IKBKBO14920 756 aa10.69□□□□□ -0.7
CHD8-204ENST00000553622 TGFB1I1O43294 461 aa10.69□□□□□ -0.7
CHD8-204ENST00000553622 FGFR1OPO95684 399 aaKnown RBP10.69□□□□□ -0.7
CHD8-204ENST00000553622 EDN1P05305 212 aa10.69□□□□□ -0.7
CHD8-204ENST00000553622 IQCF3P0C7M6 154 aa10.69□□□□□ -0.7
CHD8-204ENST00000553622 GHRP10912 638 aa10.69□□□□□ -0.7
CHD8-204ENST00000553622 CKBP12277 381 aa10.69□□□□□ -0.7
CHD8-204ENST00000553622 CAPN2P17655 700 aa10.69□□□□□ -0.7
CHD8-204ENST00000553622 CDK11BP21127 795 aaKnown RBP10.69□□□□□ -0.7
CHD8-204ENST00000553622 NR2F2P24468 414 aa10.69□□□□□ -0.7
CHD8-204ENST00000553622 RPL13P26373 211 aaKnown RBP10.69□□□□□ -0.7
CHD8-204ENST00000553622 POU5F1BQ06416 359 aa10.69□□□□□ -0.7
CHD8-204ENST00000553622 NFX1Q12986 1120 aaKnown RBP10.69□□□□□ -0.7
CHD8-204ENST00000553622 GSE1Q14687 1217 aa10.69□□□□□ -0.7
CHD8-204ENST00000553622 IQCB1Q15051 598 aa10.69□□□□□ -0.7
CHD8-204ENST00000553622 LRRC26Q2I0M4 334 aa10.69□□□□□ -0.7
CHD8-204ENST00000553622 TRIM71Q2Q1W2 868 aaKnown RBP10.69□□□□□ -0.7
CHD8-204ENST00000553622 COL13A1Q5TAT6 717 aaPredicted RBP10.69□□□□□ -0.7
CHD8-204ENST00000553622 ATF7IP2Q5U623 682 aa10.69□□□□□ -0.7
CHD8-204ENST00000553622 PPP4R3CPQ6ZMV5 832 aa10.69□□□□□ -0.7
CHD8-204ENST00000553622 CDR2LQ86X02 465 aaPredicted RBP10.69□□□□□ -0.7
CHD8-204ENST00000553622 IFNLR1Q8IU57 520 aaPredicted RBP10.69□□□□□ -0.7
CHD8-204ENST00000553622 TMEM40Q8WWA1 233 aa10.69□□□□□ -0.7
CHD8-204ENST00000553622 MED15Q96RN5 788 aa10.69□□□□□ -0.7
CHD8-204ENST00000553622 DUSP9Q99956 384 aaKnown RBP10.69□□□□□ -0.7
CHD8-204ENST00000553622 NFKBIZQ9BYH8 718 aa10.69□□□□□ -0.7
CHD8-204ENST00000553622 PPP1R12CQ9BZL4 782 aa10.69□□□□□ -0.7
CHD8-204ENST00000553622 PRDM5Q9NQX1 630 aaPredicted RBP10.69□□□□□ -0.7
CHD8-204ENST00000553622 AGPAT3Q9NRZ7 376 aa10.69□□□□□ -0.7
CHD8-204ENST00000553622 FANCLQ9NW38 375 aa10.69□□□□□ -0.7
CHD8-204ENST00000553622 PDCD11Q14690 1871 aaKnown RBP10.68□□□□□ -0.7
CHD8-204ENST00000553622 CNTNAP2Q9UHC6 1331 aa10.68□□□□□ -0.7
CHD8-204ENST00000553622 GOLGA8IPA6NC78 632 aa10.68□□□□□ -0.7
CHD8-204ENST00000553622 CCDC85CA6NKD9 419 aa10.68□□□□□ -0.7
CHD8-204ENST00000553622 GOLGA8JA6NMD2 632 aa10.68□□□□□ -0.7
CHD8-204ENST00000553622 TTLL13PA6NNM8 815 aa10.68□□□□□ -0.7
CHD8-204ENST00000553622 CETN3O15182 167 aa10.68□□□□□ -0.7
CHD8-204ENST00000553622 TSPAN1O60635 241 aa10.68□□□□□ -0.7
CHD8-204ENST00000553622 EXOC3O60645 756 aa10.68□□□□□ -0.7
CHD8-204ENST00000553622 CAND2O75155 1236 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms