RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 BRD1O95696 1058 aa26.1■■□□□ 1.77
TDP1-205ENST00000553527 ARF4P18085 180 aaPredicted RBP26.1■■□□□ 1.77
TDP1-205ENST00000553527 AXLP30530 894 aa26.1■■□□□ 1.77
TDP1-205ENST00000553527 CAMK1Q14012 370 aa26.1■■□□□ 1.77
TDP1-205ENST00000553527 PCBP1Q15365 356 aaKnown RBP eCLIP26.1■■□□□ 1.77
TDP1-205ENST00000553527 TJAP1Q5JTD0 557 aa26.1■■□□□ 1.77
TDP1-205ENST00000553527 KCNT2Q6UVM3 1135 aa26.1■■□□□ 1.77
TDP1-205ENST00000553527 GLB1LQ6UWU2 654 aa26.1■■□□□ 1.77
TDP1-205ENST00000553527 DEPTORQ8TB45 409 aa26.1■■□□□ 1.77
TDP1-205ENST00000553527 MICAL1Q8TDZ2 1067 aa26.1■■□□□ 1.77
TDP1-205ENST00000553527 PNMA5Q96PV4 448 aa26.1■■□□□ 1.77
TDP1-205ENST00000553527 EIF2AQ9BY44 585 aaKnown RBP26.1■■□□□ 1.77
TDP1-205ENST00000553527 NFKBIZQ9BYH8 718 aa26.1■■□□□ 1.77
TDP1-205ENST00000553527 IGFLR1Q9H665 355 aa26.1■■□□□ 1.77
TDP1-205ENST00000553527 OFD1O75665 1012 aa26.09■■□□□ 1.77
TDP1-205ENST00000553527 DDIT3P35638 169 aa26.09■■□□□ 1.77
TDP1-205ENST00000553527 AMHR2Q16671 573 aa26.09■■□□□ 1.77
TDP1-205ENST00000553527 TMEM132AQ24JP5 1023 aa26.09■■□□□ 1.77
TDP1-205ENST00000553527 CABP7Q86V35 215 aa26.09■■□□□ 1.77
TDP1-205ENST00000553527 IFT74Q96LB3 600 aa26.09■■□□□ 1.77
TDP1-205ENST00000553527 ZNF558Q96NG5 402 aa26.09■■□□□ 1.77
TDP1-205ENST00000553527 IPO9Q96P70 1041 aaKnown RBP26.09■■□□□ 1.77
TDP1-205ENST00000553527 APOL6Q9BWW8 343 aa26.09■■□□□ 1.77
TDP1-205ENST00000553527 BRWD1Q9NSI6 2320 aa26.09■■□□□ 1.77
TDP1-205ENST00000553527 NT5C1B-RDH14C9J2C7 533 aa26.08■■□□□ 1.77
TDP1-205ENST00000553527 BMP15O95972 392 aa26.08■■□□□ 1.77
TDP1-205ENST00000553527 ITGA4P13612 1032 aa26.08■■□□□ 1.77
TDP1-205ENST00000553527 IRS1P35568 1242 aa26.08■■□□□ 1.77
TDP1-205ENST00000553527 KCNQ1P51787 676 aa26.08■■□□□ 1.77
TDP1-205ENST00000553527 NUCB2P80303 420 aa26.08■■□□□ 1.77
TDP1-205ENST00000553527 GRIN1Q05586 938 aa26.08■■□□□ 1.77
TDP1-205ENST00000553527 RNASELQ05823 741 aaKnown RBP26.08■■□□□ 1.77
TDP1-205ENST00000553527 NOMO2Q5JPE7 1267 aa26.08■■□□□ 1.77
TDP1-205ENST00000553527 AGMOQ6ZNB7 445 aa26.08■■□□□ 1.77
TDP1-205ENST00000553527 MRPL10Q7Z7H8 261 aaKnown RBP26.08■■□□□ 1.77
TDP1-205ENST00000553527 KIFC3Q9BVG8 833 aa26.08■■□□□ 1.77
TDP1-205ENST00000553527 MRPL9Q9BYD2 267 aaKnown RBP26.08■■□□□ 1.77
TDP1-205ENST00000553527 TRIM6Q9C030 488 aaPredicted RBP26.08■■□□□ 1.77
TDP1-205ENST00000553527 GBP3Q9H0R5 595 aa26.08■■□□□ 1.77
TDP1-205ENST00000553527 CSRNP2Q9H175 543 aa26.08■■□□□ 1.77
TDP1-205ENST00000553527 USP20Q9Y2K6 914 aa26.08■■□□□ 1.77
TDP1-205ENST00000553527 HES2Q9Y543 173 aa26.08■■□□□ 1.77
TDP1-205ENST00000553527 IPPQ9Y573 584 aa26.08■■□□□ 1.77
TDP1-205ENST00000553527 PCDHGC5Q9Y5F6 944 aa26.08■■□□□ 1.77
TDP1-205ENST00000553527 MARCKSP29966 332 aaPredicted RBP26.07■■□□□ 1.76
TDP1-205ENST00000553527 UBA7P41226 1012 aa26.07■■□□□ 1.76
TDP1-205ENST00000553527 NAMPTP43490 491 aa26.07■■□□□ 1.76
TDP1-205ENST00000553527 RAD51AP2Q09MP3 1159 aa26.07■■□□□ 1.76
TDP1-205ENST00000553527 PPP2R5AQ15172 486 aa26.07■■□□□ 1.76
TDP1-205ENST00000553527 CSPP1Q1MSJ5 1256 aa26.07■■□□□ 1.76
TDP1-205ENST00000553527 AAK1Q2M2I8 961 aa26.07■■□□□ 1.76
TDP1-205ENST00000553527 RINT1Q6NUQ1 792 aa26.07■■□□□ 1.76
TDP1-205ENST00000553527 SMG8Q8ND04 991 aaKnown RBP26.07■■□□□ 1.76
TDP1-205ENST00000553527 KIFAP3Q92845 792 aa26.07■■□□□ 1.76
TDP1-205ENST00000553527 RUSC1Q9BVN2 902 aa26.07■■□□□ 1.76
TDP1-205ENST00000553527 NT5C3AQ9H0P0 336 aa26.07■■□□□ 1.76
TDP1-205ENST00000553527 C2orf40Q9H1Z8 148 aa26.07■■□□□ 1.76
TDP1-205ENST00000553527 RSAD1Q9HA92 442 aa26.07■■□□□ 1.76
TDP1-205ENST00000553527 PRMT7Q9NVM4 692 aaPredicted RBP26.07■■□□□ 1.76
TDP1-205ENST00000553527 CCDC169A6NNP5 214 aa26.06■■□□□ 1.76
TDP1-205ENST00000553527 HIP1RO75146 1068 aa26.06■■□□□ 1.76
TDP1-205ENST00000553527 ZC3H11AO75152 810 aaKnown RBP eCLIP26.06■■□□□ 1.76
TDP1-205ENST00000553527 NPTXRO95502 500 aa26.06■■□□□ 1.76
TDP1-205ENST00000553527 NCLP19338 710 aaKnown RBP26.06■■□□□ 1.76
TDP1-205ENST00000553527 KCNA5P22460 613 aa26.06■■□□□ 1.76
TDP1-205ENST00000553527 ALDH7A1P49419 539 aaKnown RBP26.06■■□□□ 1.76
TDP1-205ENST00000553527 AFF1P51825 1210 aaKnown RBP26.06■■□□□ 1.76
TDP1-205ENST00000553527 BCAR1P56945 870 aa26.06■■□□□ 1.76
TDP1-205ENST00000553527 CDCA2Q69YH5 1023 aaPredicted RBP26.06■■□□□ 1.76
TDP1-205ENST00000553527 RASSF8Q8NHQ8 419 aa26.06■■□□□ 1.76
TDP1-205ENST00000553527 URGCPQ8TCY9 931 aa26.06■■□□□ 1.76
TDP1-205ENST00000553527 SYMPKQ92797 1274 aaKnown RBP26.06■■□□□ 1.76
TDP1-205ENST00000553527 AK8Q96MA6 479 aa26.06■■□□□ 1.76
TDP1-205ENST00000553527 RNF39Q9H2S5 420 aa26.06■■□□□ 1.76
TDP1-205ENST00000553527 UBE2ZQ9H832 354 aaPredicted RBP26.06■■□□□ 1.76
TDP1-205ENST00000553527 TBC1D13Q9NVG8 400 aa26.06■■□□□ 1.76
TDP1-205ENST00000553527 SPG21Q9NZD8 308 aa26.06■■□□□ 1.76
TDP1-205ENST00000553527 ZDHHC9Q9Y397 364 aa26.06■■□□□ 1.76
TDP1-205ENST00000553527 SPTBN5Q9NRC6 3674 aaKnown RBP26.05■■□□□ 1.76
TDP1-205ENST00000553527 SFI1A8K8P3 1242 aa26.05■■□□□ 1.76
TDP1-205ENST00000553527 POMCP01189 267 aa26.05■■□□□ 1.76
TDP1-205ENST00000553527 GTF2F1P35269 517 aaKnown RBP eCLIP26.05■■□□□ 1.76
TDP1-205ENST00000553527 PEX3P56589 373 aa26.05■■□□□ 1.76
TDP1-205ENST00000553527 ERVFC1P60507 584 aa26.05■■□□□ 1.76
TDP1-205ENST00000553527 DHX8Q14562 1220 aaKnown RBP26.05■■□□□ 1.76
TDP1-205ENST00000553527 MAPK6Q16659 721 aa26.05■■□□□ 1.76
TDP1-205ENST00000553527 SPECC1Q5M775 1068 aa26.05■■□□□ 1.76
TDP1-205ENST00000553527 HYIQ5T013 277 aa26.05■■□□□ 1.76
TDP1-205ENST00000553527 RBM23Q86U06 439 aaKnown RBP26.05■■□□□ 1.76
TDP1-205ENST00000553527 CNNM3Q8NE01 707 aa26.05■■□□□ 1.76
TDP1-205ENST00000553527 CCDC51Q96ER9 411 aa26.05■■□□□ 1.76
TDP1-205ENST00000553527 CALML4Q96GE6 196 aa26.05■■□□□ 1.76
TDP1-205ENST00000553527 FZD8Q9H461 694 aa26.05■■□□□ 1.76
TDP1-205ENST00000553527 NRDE2Q9H7Z3 1164 aa26.05■■□□□ 1.76
TDP1-205ENST00000553527 CLDND1Q9NY35 253 aa26.05■■□□□ 1.76
TDP1-205ENST00000553527 PUF60Q9UHX1 559 aaKnown RBP26.05■■□□□ 1.76
TDP1-205ENST00000553527 TDRD15B5MCY1 1934 aaKnown RBP26.04■■□□□ 1.76
TDP1-205ENST00000553527 A0A1B0GUA9 196 aa26.04■■□□□ 1.76
TDP1-205ENST00000553527 TTLL13PA6NNM8 815 aa26.04■■□□□ 1.76
TDP1-205ENST00000553527 PRKCBP05771 671 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms