RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 ERGIC2Q96RQ1 377 aa19.23■□□□□ 0.67
PSEN1-206ENST00000553447 MAP7D2Q96T17 732 aa19.23■□□□□ 0.67
PSEN1-206ENST00000553447 NFKBIZQ9BYH8 718 aa19.23■□□□□ 0.67
PSEN1-206ENST00000553447 DDX20Q9UHI6 824 aaKnown RBP19.23■□□□□ 0.67
PSEN1-206ENST00000553447 AKT3Q9Y243 479 aa19.23■□□□□ 0.67
PSEN1-206ENST00000553447 MAPK13O15264 365 aa19.22■□□□□ 0.67
PSEN1-206ENST00000553447 CST5P28325 142 aaPredicted RBP19.22■□□□□ 0.67
PSEN1-206ENST00000553447 PTENP60484 403 aa19.22■□□□□ 0.67
PSEN1-206ENST00000553447 ADAM17P78536 824 aa19.22■□□□□ 0.67
PSEN1-206ENST00000553447 CCDC150Q8NCX0 1101 aa19.22■□□□□ 0.67
PSEN1-206ENST00000553447 PPP1R13LQ8WUF5 828 aa19.22■□□□□ 0.67
PSEN1-206ENST00000553447 TRIM17Q9Y577 477 aa19.22■□□□□ 0.67
PSEN1-206ENST00000553447 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.22■□□□□ 0.67
PSEN1-206ENST00000553447 PTCH2Q9Y6C5 1203 aa19.22■□□□□ 0.67
PSEN1-206ENST00000553447 STYXL1Q9Y6J8 313 aa19.22■□□□□ 0.67
PSEN1-206ENST00000553447 MSCO60682 206 aa19.21■□□□□ 0.67
PSEN1-206ENST00000553447 VTNP04004 478 aa19.21■□□□□ 0.67
PSEN1-206ENST00000553447 EDN1P05305 212 aa19.21■□□□□ 0.67
PSEN1-206ENST00000553447 PRKCBP05771 671 aa19.21■□□□□ 0.67
PSEN1-206ENST00000553447 HOXC8P31273 242 aa19.21■□□□□ 0.67
PSEN1-206ENST00000553447 GRK4P32298 578 aa19.21■□□□□ 0.67
PSEN1-206ENST00000553447 PHKA2P46019 1235 aa19.21■□□□□ 0.67
PSEN1-206ENST00000553447 KCNH2Q12809 1159 aa19.21■□□□□ 0.67
PSEN1-206ENST00000553447 HIC1Q14526 733 aa19.21■□□□□ 0.67
PSEN1-206ENST00000553447 ARID5BQ14865 1188 aa19.21■□□□□ 0.67
PSEN1-206ENST00000553447 SYCP1Q15431 976 aa19.21■□□□□ 0.67
PSEN1-206ENST00000553447 MAPK6Q16659 721 aa19.21■□□□□ 0.67
PSEN1-206ENST00000553447 CXCL17Q6UXB2 119 aa19.21■□□□□ 0.67
PSEN1-206ENST00000553447 IFNLR1Q8IU57 520 aaPredicted RBP19.21■□□□□ 0.67
PSEN1-206ENST00000553447 KIAA0319LQ8IZA0 1049 aa19.21■□□□□ 0.67
PSEN1-206ENST00000553447 CACTINQ8WUQ7 758 aaKnown RBP19.21■□□□□ 0.67
PSEN1-206ENST00000553447 POMGNT1Q8WZA1 660 aa19.21■□□□□ 0.67
PSEN1-206ENST00000553447 ZNF668Q96K58 619 aaPredicted RBP19.21■□□□□ 0.67
PSEN1-206ENST00000553447 ZNF830Q96NB3 372 aaPredicted RBP19.21■□□□□ 0.67
PSEN1-206ENST00000553447 MRPL4Q9BYD3 311 aaKnown RBP19.21■□□□□ 0.67
PSEN1-206ENST00000553447 KCNF1Q9H3M0 494 aa19.21■□□□□ 0.67
PSEN1-206ENST00000553447 HDAC6Q9UBN7 1215 aa19.21■□□□□ 0.67
PSEN1-206ENST00000553447 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.21■□□□□ 0.67
PSEN1-206ENST00000553447 SMIM35A0A1B0GVV1 85 aa19.2■□□□□ 0.66
PSEN1-206ENST00000553447 C17orf102A2RUQ5 167 aa19.2■□□□□ 0.66
PSEN1-206ENST00000553447 AFPP02771 609 aaKnown RBP19.2■□□□□ 0.66
PSEN1-206ENST00000553447 CYP2C9P11712 490 aa19.2■□□□□ 0.66
PSEN1-206ENST00000553447 C1QTNF8P60827 252 aa19.2■□□□□ 0.66
PSEN1-206ENST00000553447 MBTD1Q05BQ5 628 aa19.2■□□□□ 0.66
PSEN1-206ENST00000553447 TRIM14Q14142 442 aa19.2■□□□□ 0.66
PSEN1-206ENST00000553447 DCAF17Q5H9S7 520 aaPredicted RBP19.2■□□□□ 0.66
PSEN1-206ENST00000553447 SLFN12LQ6IEE8 588 aa19.2■□□□□ 0.66
PSEN1-206ENST00000553447 CCSAPQ6IQ19 270 aaPredicted RBP19.2■□□□□ 0.66
PSEN1-206ENST00000553447 ZPBP2Q6X784 338 aa19.2■□□□□ 0.66
PSEN1-206ENST00000553447 PPFIBP1Q86W92 1011 aa19.2■□□□□ 0.66
PSEN1-206ENST00000553447 LRRC8AQ8IWT6 810 aa19.2■□□□□ 0.66
PSEN1-206ENST00000553447 C7orf31Q8N865 590 aa19.2■□□□□ 0.66
PSEN1-206ENST00000553447 ZSWIM2Q8NEG5 633 aa19.2■□□□□ 0.66
PSEN1-206ENST00000553447 SLC35C1Q96A29 364 aa19.2■□□□□ 0.66
PSEN1-206ENST00000553447 FBXL18Q96ME1 805 aa19.2■□□□□ 0.66
PSEN1-206ENST00000553447 TARS2Q9BW92 718 aaKnown RBP19.2■□□□□ 0.66
PSEN1-206ENST00000553447 FZD8Q9H461 694 aa19.2■□□□□ 0.66
PSEN1-206ENST00000553447 IFT122Q9HBG6 1241 aa19.2■□□□□ 0.66
PSEN1-206ENST00000553447 WBP1LQ9NX94 342 aa19.2■□□□□ 0.66
PSEN1-206ENST00000553447 USP20Q9Y2K6 914 aa19.2■□□□□ 0.66
PSEN1-206ENST00000553447 A0A087WZ62 844 aa19.19■□□□□ 0.66
PSEN1-206ENST00000553447 GOLGA8IPA6NC78 632 aa19.19■□□□□ 0.66
PSEN1-206ENST00000553447 GOLGA8JA6NMD2 632 aa19.19■□□□□ 0.66
PSEN1-206ENST00000553447 INO80B-WBP1J3KQ70 363 aa19.19■□□□□ 0.66
PSEN1-206ENST00000553447 KIAA0391O15091 583 aaKnown RBP19.19■□□□□ 0.66
PSEN1-206ENST00000553447 GNAT1P11488 350 aa19.19■□□□□ 0.66
PSEN1-206ENST00000553447 KRT13P13646 458 aa19.19■□□□□ 0.66
PSEN1-206ENST00000553447 GPC3P51654 580 aa19.19■□□□□ 0.66
PSEN1-206ENST00000553447 RBL2Q08999 1139 aa19.19■□□□□ 0.66
PSEN1-206ENST00000553447 BFSP1Q12934 665 aa19.19■□□□□ 0.66
PSEN1-206ENST00000553447 TCERG1LQ5VWI1 586 aa19.19■□□□□ 0.66
PSEN1-206ENST00000553447 RUFY4Q6ZNE9 571 aa19.19■□□□□ 0.66
PSEN1-206ENST00000553447 INTS8Q75QN2 995 aaKnown RBP19.19■□□□□ 0.66
PSEN1-206ENST00000553447 ZNF410Q86VK4 478 aa19.19■□□□□ 0.66
PSEN1-206ENST00000553447 GPD1LQ8N335 351 aa19.19■□□□□ 0.66
PSEN1-206ENST00000553447 RDH13Q8NBN7 331 aa19.19■□□□□ 0.66
PSEN1-206ENST00000553447 PCSK9Q8NBP7 692 aaKnown RBP19.19■□□□□ 0.66
PSEN1-206ENST00000553447 SAAL1Q96ER3 474 aa19.19■□□□□ 0.66
PSEN1-206ENST00000553447 FDXACB1Q9BRP7 624 aaPredicted RBP19.19■□□□□ 0.66
PSEN1-206ENST00000553447 INO80BQ9C086 356 aaPredicted RBP19.19■□□□□ 0.66
PSEN1-206ENST00000553447 FAM49AQ9H0Q0 323 aaPredicted RBP19.19■□□□□ 0.66
PSEN1-206ENST00000553447 HMX1Q9NP08 348 aaPredicted RBP19.19■□□□□ 0.66
PSEN1-206ENST00000553447 SIK3Q9Y2K2 1263 aa19.19■□□□□ 0.66
PSEN1-206ENST00000553447 ACKR2O00590 384 aa19.18■□□□□ 0.66
PSEN1-206ENST00000553447 TREHO43280 583 aa19.18■□□□□ 0.66
PSEN1-206ENST00000553447 GYPCP04921 128 aa19.18■□□□□ 0.66
PSEN1-206ENST00000553447 ASGR1P07306 291 aa19.18■□□□□ 0.66
PSEN1-206ENST00000553447 ADRB2P07550 413 aa19.18■□□□□ 0.66
PSEN1-206ENST00000553447 TPM1P09493 284 aa19.18■□□□□ 0.66
PSEN1-206ENST00000553447 SFPQP23246 707 aaKnown RBP eCLIP19.18■□□□□ 0.66
PSEN1-206ENST00000553447 KLK7P49862 253 aa19.18■□□□□ 0.66
PSEN1-206ENST00000553447 LRMPQ12912 555 aa19.18■□□□□ 0.66
PSEN1-206ENST00000553447 KCNA10Q16322 511 aa19.18■□□□□ 0.66
PSEN1-206ENST00000553447 SNRNP35Q16560 246 aaKnown RBP19.18■□□□□ 0.66
PSEN1-206ENST00000553447 FAM187BQ17R55 369 aa19.18■□□□□ 0.66
PSEN1-206ENST00000553447 NBPF20Q3BBV1 942 aa19.18■□□□□ 0.66
PSEN1-206ENST00000553447 CCDC155Q8N6L0 562 aa19.18■□□□□ 0.66
PSEN1-206ENST00000553447 NLRP7Q8WX94 980 aa19.18■□□□□ 0.66
PSEN1-206ENST00000553447 PCMTD1Q96MG8 357 aaPredicted RBP19.18■□□□□ 0.66
PSEN1-206ENST00000553447 PPP1R16BQ96T49 567 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms