RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 KCNN1Q92952 543 aa20.38■□□□□ 0.85
CPSF2-202ENST00000553427 PLVAPQ9BX97 442 aa20.38■□□□□ 0.85
CPSF2-202ENST00000553427 ARHGAP28Q9P2N2 729 aa20.38■□□□□ 0.85
CPSF2-202ENST00000553427 PCDHB2Q9Y5E7 798 aa20.38■□□□□ 0.85
CPSF2-202ENST00000553427 ATP6V1DQ9Y5K8 247 aa20.38■□□□□ 0.85
CPSF2-202ENST00000553427 A0A1B0GUA9 196 aa20.37■□□□□ 0.85
CPSF2-202ENST00000553427 TBKBP1A7MCY6 615 aa20.37■□□□□ 0.85
CPSF2-202ENST00000553427 ACKR2O00590 384 aa20.37■□□□□ 0.85
CPSF2-202ENST00000553427 LPXNO60711 386 aa20.37■□□□□ 0.85
CPSF2-202ENST00000553427 BMPR1AP36894 532 aa20.37■□□□□ 0.85
CPSF2-202ENST00000553427 DNM1Q05193 864 aaKnown RBP20.37■□□□□ 0.85
CPSF2-202ENST00000553427 CLLU1OSQ5K130 101 aa20.37■□□□□ 0.85
CPSF2-202ENST00000553427 GPBP1Q86WP2 473 aa20.37■□□□□ 0.85
CPSF2-202ENST00000553427 PGBD4Q96DM1 585 aa20.37■□□□□ 0.85
CPSF2-202ENST00000553427 CASD1Q96PB1 797 aa20.37■□□□□ 0.85
CPSF2-202ENST00000553427 NTPCRQ9BSD7 190 aaKnown RBP20.37■□□□□ 0.85
CPSF2-202ENST00000553427 LMCD1Q9NZU5 365 aa20.37■□□□□ 0.85
CPSF2-202ENST00000553427 RCOR1Q9UKL0 485 aa20.37■□□□□ 0.85
CPSF2-202ENST00000553427 RBM19Q9Y4C8 960 aaKnown RBP20.37■□□□□ 0.85
CPSF2-202ENST00000553427 COL4A4P53420 1690 aaPredicted RBP20.37■□□□□ 0.85
CPSF2-202ENST00000553427 FNDC1Q4ZHG4 1894 aaPredicted RBP20.37■□□□□ 0.85
CPSF2-202ENST00000553427 ZMYM2Q9UBW7 1377 aa20.36■□□□□ 0.85
CPSF2-202ENST00000553427 B4GALT5O43286 388 aa20.36■□□□□ 0.85
CPSF2-202ENST00000553427 PRKCBP05771 671 aa20.36■□□□□ 0.85
CPSF2-202ENST00000553427 PLS3P13797 630 aa20.36■□□□□ 0.85
CPSF2-202ENST00000553427 NCLP19338 710 aaKnown RBP20.36■□□□□ 0.85
CPSF2-202ENST00000553427 IBSPP21815 317 aaPredicted RBP20.36■□□□□ 0.85
CPSF2-202ENST00000553427 SCP2P22307 547 aa20.36■□□□□ 0.85
CPSF2-202ENST00000553427 ZNF131P52739 623 aa20.36■□□□□ 0.85
CPSF2-202ENST00000553427 PEX3P56589 373 aa20.36■□□□□ 0.85
CPSF2-202ENST00000553427 MCM6Q14566 821 aa20.36■□□□□ 0.85
CPSF2-202ENST00000553427 PAN2Q504Q3 1202 aaKnown RBP20.36■□□□□ 0.85
CPSF2-202ENST00000553427 NAALADL2Q58DX5 795 aa20.36■□□□□ 0.85
CPSF2-202ENST00000553427 AXDND1Q5T1B0 1012 aaPredicted RBP20.36■□□□□ 0.85
CPSF2-202ENST00000553427 RRAGBQ5VZM2 374 aa20.36■□□□□ 0.85
CPSF2-202ENST00000553427 ABI1Q8IZP0 508 aa20.36■□□□□ 0.85
CPSF2-202ENST00000553427 LRRC43Q8N309 656 aa20.36■□□□□ 0.85
CPSF2-202ENST00000553427 KIFC3Q9BVG8 833 aa20.36■□□□□ 0.85
CPSF2-202ENST00000553427 MRPL9Q9BYD2 267 aaKnown RBP20.36■□□□□ 0.85
CPSF2-202ENST00000553427 TMEM134Q9H6X4 195 aa20.36■□□□□ 0.85
CPSF2-202ENST00000553427 MTUS1Q9ULD2 1270 aa20.36■□□□□ 0.85
CPSF2-202ENST00000553427 H3BNC9 293 aa20.35■□□□□ 0.85
CPSF2-202ENST00000553427 CTNNB1P35222 781 aa20.35■□□□□ 0.85
CPSF2-202ENST00000553427 FOXD4L6Q3SYB3 417 aaPredicted RBP20.35■□□□□ 0.85
CPSF2-202ENST00000553427 SLC27A1Q6PCB7 646 aa20.35■□□□□ 0.85
CPSF2-202ENST00000553427 FOXD4L3Q6VB84 417 aaPredicted RBP20.35■□□□□ 0.85
CPSF2-202ENST00000553427 RNF169Q8NCN4 708 aa20.35■□□□□ 0.85
CPSF2-202ENST00000553427 GDPD5Q8WTR4 605 aa20.35■□□□□ 0.85
CPSF2-202ENST00000553427 P2RX5Q93086 422 aa20.35■□□□□ 0.85
CPSF2-202ENST00000553427 CPB2Q96IY4 423 aa20.35■□□□□ 0.85
CPSF2-202ENST00000553427 REEP2Q9BRK0 252 aa20.35■□□□□ 0.85
CPSF2-202ENST00000553427 C11orf84Q9BUA3 381 aaPredicted RBP20.35■□□□□ 0.85
CPSF2-202ENST00000553427 POLD4Q9HCU8 107 aa20.35■□□□□ 0.85
CPSF2-202ENST00000553427 KMT5AQ9NQR1 393 aa20.35■□□□□ 0.85
CPSF2-202ENST00000553427 LARSQ9P2J5 1176 aaKnown RBP20.35■□□□□ 0.85
CPSF2-202ENST00000553427 NLRC5Q86WI3 1866 aa20.35■□□□□ 0.85
CPSF2-202ENST00000553427 CCDC169A6NNP5 214 aa20.34■□□□□ 0.85
CPSF2-202ENST00000553427 RFXAPO00287 272 aa20.34■□□□□ 0.85
CPSF2-202ENST00000553427 N4BP3O15049 544 aa20.34■□□□□ 0.85
CPSF2-202ENST00000553427 INPPL1O15357 1258 aa20.34■□□□□ 0.85
CPSF2-202ENST00000553427 GTPBP6O43824 516 aaPredicted RBP20.34■□□□□ 0.85
CPSF2-202ENST00000553427 KRT85P78386 507 aa20.34■□□□□ 0.85
CPSF2-202ENST00000553427 PRPF4BQ13523 1007 aaKnown RBP20.34■□□□□ 0.85
CPSF2-202ENST00000553427 CSPP1Q1MSJ5 1256 aa20.34■□□□□ 0.85
CPSF2-202ENST00000553427 GLB1LQ6UWU2 654 aa20.34■□□□□ 0.85
CPSF2-202ENST00000553427 SMG8Q8ND04 991 aaKnown RBP20.34■□□□□ 0.85
CPSF2-202ENST00000553427 MAFAQ8NHW3 353 aaPredicted RBP20.34■□□□□ 0.85
CPSF2-202ENST00000553427 EIF2AQ9BY44 585 aaKnown RBP20.34■□□□□ 0.85
CPSF2-202ENST00000553427 UBN1Q9NPG3 1134 aa20.34■□□□□ 0.85
CPSF2-202ENST00000553427 AAASQ9NRG9 546 aa20.34■□□□□ 0.85
CPSF2-202ENST00000553427 IPPQ9Y573 584 aa20.34■□□□□ 0.85
CPSF2-202ENST00000553427 MTCH2Q9Y6C9 303 aa20.34■□□□□ 0.85
CPSF2-202ENST00000553427 A0A087X0B3 334 aa20.33■□□□□ 0.85
CPSF2-202ENST00000553427 CARNS1A5YM72 827 aa20.33■□□□□ 0.85
CPSF2-202ENST00000553427 H0YCG3 227 aa20.33■□□□□ 0.85
CPSF2-202ENST00000553427 K7ERI5 159 aa20.33■□□□□ 0.85
CPSF2-202ENST00000553427 LAG3P18627 525 aa20.33■□□□□ 0.85
CPSF2-202ENST00000553427 STAT6P42226 847 aa20.33■□□□□ 0.85
CPSF2-202ENST00000553427 ME1P48163 572 aa20.33■□□□□ 0.85
CPSF2-202ENST00000553427 SMTNP53814 917 aa20.33■□□□□ 0.85
CPSF2-202ENST00000553427 NUCB2P80303 420 aa20.33■□□□□ 0.85
CPSF2-202ENST00000553427 RAD51AP2Q09MP3 1159 aa20.33■□□□□ 0.85
CPSF2-202ENST00000553427 GIT2Q14161 759 aa20.33■□□□□ 0.85
CPSF2-202ENST00000553427 SHC4Q6S5L8 630 aa20.33■□□□□ 0.85
CPSF2-202ENST00000553427 AGMOQ6ZNB7 445 aa20.33■□□□□ 0.85
CPSF2-202ENST00000553427 HACE1Q8IYU2 909 aa20.33■□□□□ 0.85
CPSF2-202ENST00000553427 TMEM161BQ8NDZ6 487 aa20.33■□□□□ 0.85
CPSF2-202ENST00000553427 HELQQ8TDG4 1101 aa20.33■□□□□ 0.85
CPSF2-202ENST00000553427 LMAN2LQ9H0V9 348 aa20.33■□□□□ 0.85
CPSF2-202ENST00000553427 CUEDC2Q9H467 287 aa20.33■□□□□ 0.85
CPSF2-202ENST00000553427 PDZD7Q9H5P4 517 aa20.33■□□□□ 0.85
CPSF2-202ENST00000553427 CWH43Q9H720 699 aa20.33■□□□□ 0.85
CPSF2-202ENST00000553427 PARVGQ9HBI0 331 aa20.33■□□□□ 0.85
CPSF2-202ENST00000553427 TYW1Q9NV66 732 aaKnown RBP20.33■□□□□ 0.85
CPSF2-202ENST00000553427 PCDHA7Q9UN72 937 aa20.33■□□□□ 0.85
CPSF2-202ENST00000553427 NPHP3-ACAD11A0A0J9YXS1 232 aa20.32■□□□□ 0.84
CPSF2-202ENST00000553427 OFD1O75665 1012 aa20.32■□□□□ 0.84
CPSF2-202ENST00000553427 EDN1P05305 212 aa20.32■□□□□ 0.84
CPSF2-202ENST00000553427 IGFBP4P22692 258 aa20.32■□□□□ 0.84
CPSF2-202ENST00000553427 NCKAP1LP55160 1127 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms