RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 MFSD1Q9H3U5 465 aa11.11□□□□□ -0.63
ACTN1-208ENST00000553370 CHST12Q9NRB3 414 aa11.11□□□□□ -0.63
ACTN1-208ENST00000553370 DZANK1Q9NVP4 752 aa11.11□□□□□ -0.63
ACTN1-208ENST00000553370 DBR1Q9UK59 544 aaKnown RBP11.11□□□□□ -0.63
ACTN1-208ENST00000553370 WDR87Q6ZQQ6 2873 aa11.1□□□□□ -0.63
ACTN1-208ENST00000553370 TMEM150BA6NC51 233 aa11.1□□□□□ -0.63
ACTN1-208ENST00000553370 C2orf71A6NGG8 1288 aa11.1□□□□□ -0.63
ACTN1-208ENST00000553370 PHKA2P46019 1235 aa11.1□□□□□ -0.63
ACTN1-208ENST00000553370 PSMC5P62195 406 aa11.1□□□□□ -0.63
ACTN1-208ENST00000553370 ITIH3Q06033 890 aa11.1□□□□□ -0.63
ACTN1-208ENST00000553370 INF2Q27J81 1249 aa11.1□□□□□ -0.63
ACTN1-208ENST00000553370 NOMO2Q5JPE7 1267 aa11.1□□□□□ -0.63
ACTN1-208ENST00000553370 PLA2G4FQ68DD2 849 aa11.1□□□□□ -0.63
ACTN1-208ENST00000553370 BMP8AQ7Z5Y6 402 aa11.1□□□□□ -0.63
ACTN1-208ENST00000553370 METTL3Q86U44 580 aaKnown RBP11.1□□□□□ -0.63
ACTN1-208ENST00000553370 CABP7Q86V35 215 aa11.1□□□□□ -0.63
ACTN1-208ENST00000553370 LINC01465Q8N7H1 131 aa11.1□□□□□ -0.63
ACTN1-208ENST00000553370 SUSD6Q92537 303 aa11.1□□□□□ -0.63
ACTN1-208ENST00000553370 LPPQ93052 612 aa11.1□□□□□ -0.63
ACTN1-208ENST00000553370 RNF19AQ9NV58 838 aa11.1□□□□□ -0.63
ACTN1-208ENST00000553370 TRIP11Q15643 1979 aa11.09□□□□□ -0.63
ACTN1-208ENST00000553370 CLASP2O75122 1294 aaKnown RBP11.09□□□□□ -0.63
ACTN1-208ENST00000553370 PSMD10O75832 226 aa11.09□□□□□ -0.63
ACTN1-208ENST00000553370 ERLIN2O94905 339 aa11.09□□□□□ -0.63
ACTN1-208ENST00000553370 SSBP05455 408 aaKnown RBP eCLIP11.09□□□□□ -0.63
ACTN1-208ENST00000553370 RFX1P22670 979 aa11.09□□□□□ -0.63
ACTN1-208ENST00000553370 DRP2Q13474 957 aa11.09□□□□□ -0.63
ACTN1-208ENST00000553370 GIT2Q14161 759 aa11.09□□□□□ -0.63
ACTN1-208ENST00000553370 NTRK3Q16288 839 aa11.09□□□□□ -0.63
ACTN1-208ENST00000553370 GALNT17Q6IS24 598 aa11.09□□□□□ -0.63
ACTN1-208ENST00000553370 SYCE2Q6PIF2 218 aa11.09□□□□□ -0.63
ACTN1-208ENST00000553370 ELMSAN1Q6PJG2 1045 aa11.09□□□□□ -0.63
ACTN1-208ENST00000553370 TMEM184AQ6ZMB5 413 aa11.09□□□□□ -0.63
ACTN1-208ENST00000553370 EXOC8Q8IYI6 725 aa11.09□□□□□ -0.63
ACTN1-208ENST00000553370 MRPL43Q8N983 215 aaKnown RBP11.09□□□□□ -0.63
ACTN1-208ENST00000553370 KREMEN2Q8NCW0 462 aa11.09□□□□□ -0.63
ACTN1-208ENST00000553370 PRSS33Q8NF86 280 aa11.09□□□□□ -0.63
ACTN1-208ENST00000553370 AUTS2Q8WXX7 1259 aa11.09□□□□□ -0.63
ACTN1-208ENST00000553370 ATOH1Q92858 354 aaPredicted RBP11.09□□□□□ -0.63
ACTN1-208ENST00000553370 KCNB2Q92953 911 aa11.09□□□□□ -0.63
ACTN1-208ENST00000553370 NAP1L4Q99733 375 aaKnown RBP11.09□□□□□ -0.63
ACTN1-208ENST00000553370 EMILIN2Q9BXX0 1053 aa11.09□□□□□ -0.63
ACTN1-208ENST00000553370 NIFKQ9BYG3 293 aaKnown RBP11.09□□□□□ -0.63
ACTN1-208ENST00000553370 IRF2BPLQ9H1B7 796 aa11.09□□□□□ -0.63
ACTN1-208ENST00000553370 FAM105AQ9NUU6 356 aa11.09□□□□□ -0.63
ACTN1-208ENST00000553370 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.09□□□□□ -0.63
ACTN1-208ENST00000553370 COL4A3BPQ9Y5P4 624 aa11.09□□□□□ -0.63
ACTN1-208ENST00000553370 HCFC2Q9Y5Z7 792 aa11.09□□□□□ -0.63
ACTN1-208ENST00000553370 CFAP54Q96N23 3096 aa11.08□□□□□ -0.64
ACTN1-208ENST00000553370 CCNT1O60563 726 aaKnown RBP11.08□□□□□ -0.64
ACTN1-208ENST00000553370 BAG4O95429 457 aaKnown RBP11.08□□□□□ -0.64
ACTN1-208ENST00000553370 WEE2P0C1S8 567 aa11.08□□□□□ -0.64
ACTN1-208ENST00000553370 SRGAP2CP0DJJ0 459 aa11.08□□□□□ -0.64
ACTN1-208ENST00000553370 QARSP47897 775 aaKnown RBP11.08□□□□□ -0.64
ACTN1-208ENST00000553370 NCBP1Q09161 790 aaKnown RBP11.08□□□□□ -0.64
ACTN1-208ENST00000553370 TARBP2Q15633 366 aaKnown RBP11.08□□□□□ -0.64
ACTN1-208ENST00000553370 ATAT1Q5SQI0 421 aa11.08□□□□□ -0.64
ACTN1-208ENST00000553370 NCAPH2Q6IBW4 605 aa11.08□□□□□ -0.64
ACTN1-208ENST00000553370 PADI6Q6TGC4 694 aa11.08□□□□□ -0.64
ACTN1-208ENST00000553370 MOXD1Q6UVY6 613 aa11.08□□□□□ -0.64
ACTN1-208ENST00000553370 NEK8Q86SG6 692 aa11.08□□□□□ -0.64
ACTN1-208ENST00000553370 ZNF598Q86UK7 904 aaKnown RBP11.08□□□□□ -0.64
ACTN1-208ENST00000553370 PPFIBP1Q86W92 1011 aa11.08□□□□□ -0.64
ACTN1-208ENST00000553370 KSR1Q8IVT5 923 aa11.08□□□□□ -0.64
ACTN1-208ENST00000553370 UBALD2Q8IYN6 164 aa11.08□□□□□ -0.64
ACTN1-208ENST00000553370 FAM177A1Q8N128 213 aaPredicted RBP11.08□□□□□ -0.64
ACTN1-208ENST00000553370 FBXL16Q8N461 479 aa11.08□□□□□ -0.64
ACTN1-208ENST00000553370 PSPC1Q8WXF1 523 aaKnown RBP11.08□□□□□ -0.64
ACTN1-208ENST00000553370 CEP170P1Q96L14 293 aa11.08□□□□□ -0.64
ACTN1-208ENST00000553370 AGXT2Q9BYV1 514 aa11.08□□□□□ -0.64
ACTN1-208ENST00000553370 S1PR5Q9H228 398 aa11.08□□□□□ -0.64
ACTN1-208ENST00000553370 ADAM7Q9H2U9 754 aa11.08□□□□□ -0.64
ACTN1-208ENST00000553370 POMKQ9H5K3 350 aa11.08□□□□□ -0.64
ACTN1-208ENST00000553370 BRMS1Q9HCU9 246 aa11.08□□□□□ -0.64
ACTN1-208ENST00000553370 CYP26B1Q9NR63 512 aa11.08□□□□□ -0.64
ACTN1-208ENST00000553370 PDRG1Q9NUG6 133 aa11.08□□□□□ -0.64
ACTN1-208ENST00000553370 TBC1D13Q9NVG8 400 aa11.08□□□□□ -0.64
ACTN1-208ENST00000553370 STK39Q9UEW8 545 aa11.08□□□□□ -0.64
ACTN1-208ENST00000553370 SORCS3Q9UPU3 1222 aa11.08□□□□□ -0.64
ACTN1-208ENST00000553370 DOCK8Q8NF50 2099 aa11.08□□□□□ -0.64
ACTN1-208ENST00000553370 MIA3Q5JRA6 1907 aa11.07□□□□□ -0.64
ACTN1-208ENST00000553370 MYH11P35749 1972 aa11.07□□□□□ -0.64
ACTN1-208ENST00000553370 C2CD4DB7Z1M9 353 aa11.07□□□□□ -0.64
ACTN1-208ENST00000553370 MAFO75444 373 aaPredicted RBP11.07□□□□□ -0.64
ACTN1-208ENST00000553370 URODP06132 367 aa11.07□□□□□ -0.64
ACTN1-208ENST00000553370 GCFC2P16383 781 aaKnown RBP11.07□□□□□ -0.64
ACTN1-208ENST00000553370 KLRC2P26717 231 aa11.07□□□□□ -0.64
ACTN1-208ENST00000553370 RFC5P40937 340 aa11.07□□□□□ -0.64
ACTN1-208ENST00000553370 VCPP55072 806 aaKnown RBP11.07□□□□□ -0.64
ACTN1-208ENST00000553370 TOB2Q14106 344 aaPredicted RBP11.07□□□□□ -0.64
ACTN1-208ENST00000553370 MAMSTRQ6ZN01 415 aa11.07□□□□□ -0.64
ACTN1-208ENST00000553370 OTUD6AQ7L8S5 288 aa11.07□□□□□ -0.64
ACTN1-208ENST00000553370 DDX53Q86TM3 631 aaKnown RBP11.07□□□□□ -0.64
ACTN1-208ENST00000553370 C12orf76Q8N812 135 aaPredicted RBP11.07□□□□□ -0.64
ACTN1-208ENST00000553370 DAGLBQ8NCG7 672 aa11.07□□□□□ -0.64
ACTN1-208ENST00000553370 ETNPPLQ8TBG4 499 aa11.07□□□□□ -0.64
ACTN1-208ENST00000553370 TCP11Q8WWU5 503 aa11.07□□□□□ -0.64
ACTN1-208ENST00000553370 ACSF2Q96CM8 615 aaPredicted RBP11.07□□□□□ -0.64
ACTN1-208ENST00000553370 ZNF274Q96GC6 653 aaPredicted RBP11.07□□□□□ -0.64
ACTN1-208ENST00000553370 IGSF21Q96ID5 467 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms